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* [svn-r17012] Snapshot version 1.9 release 40Larry Knox2009-06-071-1/+1
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* [svn-r16995] Snapshot version 1.9 release 39Larry Knox2009-06-011-1/+1
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* [svn-r16952] corrected name of zlib in Section IV, part 3, step 2Allen Byrne2009-05-151-2/+2
| | | | Tested: windows
* [svn-r16947] 1. #1522 (B1) h5ltread_dataset_string_f error with g95Pedro Vicente Nunes2009-05-131-1/+3
| | | | | | | ISSUE: h5ltread_dataset_string_f causes library assertion with g95. SOLUTION: convert the fortran string buffer to a C buffer with HD5f2cstring, and pass this string to the C function TEST: added a test call in the fortran test lite program DOCS: added the note in RELEASE.txt "- Lite: the h5ltread_dataset_string_f and h5ltget_attribute_string_f functions had memory problems with the g95 fortran compiler. (PVN - 5/13/2009) 1522
* [svn-r16885] Update to include the modification in parallel tests.Christian Chilan2009-04-291-0/+10
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* [svn-r16807] Purpose: Fix bug 1533Neil Fortner2009-04-201-0/+2
| | | | | | | | | | | Description: Previously, there was no versioning for H5Z_class_t. This prevented applications written for 1.6 using custom filters from being able to use the 1.8 library. There is now an H5Z_class1_t and H5Z_class2_t to enable compatibility. H5Zregister is *not* versioned, it determines which version of the struct has been passed in by the value of the first field (id or version, both are ints). Tested: jam, linew, smirom (h5committest), jam (--with-default-api-version=v16)
* [svn-r16803] Purpose: Fix bug 1548Neil Fortner2009-04-201-0/+2
| | | | | | | | | Description: When writing data to a dataset, the data transform was performed after type conversion. This caused an error if the file type was non-native. This has been changed so data transforms are always performed on the memory type. Tested: jam, linew. smirom (h5committest)
* [svn-r16800] Purpose: Fix bug 1516Neil Fortner2009-04-201-0/+2
| | | | | | | | | | | Description: h5repack previously would not take named datatypes into consideration when copying datasets and attributes. This would cause extra anonymous datatypes in the target file at best, and cause errors halfway through the repacking at worst. h5repack should now always handle named datatypes correctly. Named datatypes are also now converted to the native type when -n is given. Tested: jam, linew, smirom (h5committest)
* [svn-r16799] corrected typos in fortran APIScot Breitenfeld2009-04-201-4/+4
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* [svn-r16792] Description:Mike McGreevy2009-04-201-0/+3
| | | | | | | | | | | | - Updated bin/reconfigure to use latest version of automake (1.10.2). Re-generated Makefile.in's by running bin/reconfigure. - Added libtool version numbers to c++, fortran, hl, hl c++, and hl fortran libraries. Tested: jam, liberty, smirom
* [svn-r16781] Added information about new fortran wrappers added:Scot Breitenfeld2009-04-171-0/+8
| | | | | | | H5D_h5dget_access_plist_f H5I_h5iis_valid_f H5P_h5pset_chunk_cache_f H5P_h5pget_chunk_cache_f
* [svn-r16766] Fix a comment in H5Pdapl.c, update RELEASE.txt with chages to ↵Neil Fortner2009-04-161-0/+4
| | | | | | | | factory free lists. Tested: kate
* [svn-r16749] New feature (Bug ID: 1345):Albert Cheng2009-04-141-0/+2
| | | | | | | | Added a Make target of check-all-install to test the correctness of installing via the prefix= or $DESTDIR options. Platforms tested: h5committested and jam serial mode. Then test check-all-install by hand.
* [svn-r16745] Added fixed bug 1536, about the include for the _getcwd() function.Allen Byrne2009-04-141-0/+2
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* [svn-r16738] Snapshot version 1.9 release 38Larry Knox2009-04-111-1/+1
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* [svn-r16734] addedPedro Vicente Nunes2009-04-101-0/+3
| | | | | | - h5diff new flag, -c, --compare, list objects that are not comparable. PVN - 2009/4/2 - 1368 - h5diff new flag, -N, --nan, avoids NaNs detection. PVN - 2009/4/2
* [svn-r16730] Purpose: Fix bug 1539bNeil Fortner2009-04-101-0/+2
| | | | | | | | | | Description: The H5L interface was not marked as uninitialized when H5L_term_interface was called. This caused the interface to not initialize itself later on. This prevented external links from working after calling H5close, because they were never re-registered. Tested: jam, smirom, linew (h5committest)
* [svn-r16713] Add bug number to note about previous commit.Neil Fortner2009-04-081-1/+1
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* [svn-r16710] Purpose: Fix bug 1423Neil Fortner2009-04-081-0/+3
| | | | | | | | | | | | | | Description: Versions of the library between 1.3.0 and 1.6.3 have a bug which prevents them from opening any file that does not have the root group's symbol table information cached in the root group's entry in the superblock. Prior to 1.8 this was not an issue as this information was always cached. However, 1.8.0 stopped writing this information (which is not required by the file format specification), and these older versions can therefore not read files created or last written by versions 1.8.0 to 1.8.2. This fix modifies the library to once again add this information to the superblock (when using the old file format). Tested: jam, linew, smirom (h5committest)
* [svn-r16708] added The scale index return value in H5DSiterate_scales was ↵Pedro Vicente Nunes2009-04-081-9/+12
| | | | | | not always + incremented. (PVN - 2009/4/8 - 1538)
* [svn-r16704] Snapshot version 1.9 release 37Larry Knox2009-04-081-1/+1
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* [svn-r16698] Purpose: Fix bug 503Neil Fortner2009-04-081-0/+2
| | | | | | | | | Description: Changed Skip list package to use a deterministic skip list. This allows the skip list package to avoid calling rand() and srand(), even on machines without rand_r(). There is no longer a p-value or maximum level for skip lists. Tested: jam, smirom, linew (h5committest)
* [svn-r16694] Purpose: Fix bug 1526Neil Fortner2009-04-071-0/+2
| | | | | | | | | | | Description: Previously, H5Lcopy and H5Lmove would (through H5L_move) improperly apply the "create intermediate groups" property to the source path traversal, and not the destination. Fixed it to apply the property to the destination and not the source. Also fixed H5Lcreate_ud to reject internal link classes without throwing an assertion. Tested: linew, jam, smirom (h5committtest)
* [svn-r16669] Corrected the urls for h5dump xml dtd and schemaAllen Byrne2009-04-031-0/+1
| | | | Tested: Fedora 10 gcc
* [svn-r16657] add a mention to #1402Pedro Vicente Nunes2009-04-021-1/+1
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* [svn-r16650] Snapshot version 1.9 release 36Larry Knox2009-04-011-1/+1
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* [svn-r16646] fix typoPedro Vicente Nunes2009-04-011-2/+2
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* [svn-r16643] add a mention to #1501Pedro Vicente Nunes2009-04-011-2/+6
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* [svn-r16617] Update RELEASE.txt with changes committed in revision 16615. ↵Neil Fortner2009-03-261-5/+9
| | | | | | | | Also add some bug numbers to entries in RELEASE.txt. Tested: kate
* [svn-r16599] added the notePedro Vicente Nunes2009-03-231-0/+6
| | | | | | | Fortran High-Level APIs: ------ - Lite: The h5ltget_dataset_info_f function (gets information about a dataset) was not correctly returning the dimension array (PVN - 2009/3/23)
* [svn-r16596] Update RELEASE.txt with changes committed in revision 16594.Neil Fortner2009-03-231-0/+6
| | | | Tested: kate
* [svn-r16579] Snapshot version 1.9 release 35Larry Knox2009-03-151-1/+1
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* [svn-r16571] corrected the date on the release.txt entry and a comment on ↵Pedro Vicente Nunes2009-03-111-1/+1
| | | | the script
* [svn-r16570] modified the last entry to be on top , not lastPedro Vicente Nunes2009-03-111-2/+3
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* [svn-r16568] #1462 By selecting a compression type, a big endian byte order ↵Pedro Vicente Nunes2009-03-111-0/+3
| | | | | | | | | | | | | | | | was being selected. When reading the compression parameter keyword, the compression type read flag was incorrectly set to read, removed this line of code in->configOptionVector[COMPRESS] = 1; Modified one configuration file to have the COMPRESSION-TYPE GZIP Keyword. Entered a bug description fix of - h5import: By selecting a compression type, a big endian byte order was being selected (PVN - 2009/11/3) tested: linux
* [svn-r16561] Purpose:Mike McGreevy2009-03-101-0/+4
| | | | | | | | | | | | | | | | | | Bug Fix Description: Fixing BZ #1381. The --includedir=DIR configure option, which is used to specify the installation location of C header files, did not work correctly as the path was hard-coded in config/commence.am. I'm presuming this is because an older version of automake didn't know where to put c header files. In any case, removing this line now defaults the includedir to the same directory that it is currently hard-coded to, and also fixes the configure flag to allow customization of this value. Tested: jam, liberty
* [svn-r16554] Purpose:Mike McGreevy2009-03-091-0/+3
| | | | | | | | | | | | | | | | Bug Fix Description: Removing the code from configure which strips the '-g' flag from CFLAGS when in production mode. The current default CFLAGS in production mode does not include '-g', as intended, but we should allow users to override this and enable '-g' by setting the CFLAGS environment variable if desired. Note that this applies to FCFLAGS and CXXFLAGS as well. Tested: kagiso, linew, liberty
* [svn-r16553] Snapshot version 1.9 release 34Larry Knox2009-03-081-1/+1
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* [svn-r16545] Added text that long_long macro was removed. This should have ↵Allen Byrne2009-03-051-0/+3
| | | | been added with r16489.
* [svn-r16525] Snapshot version 1.9 release 33HDF Tester2009-03-011-1/+1
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* [svn-r16523] Purpose: Fix bugs related to H5Dset_extent and fill valuesNeil Fortner2009-02-271-0/+2
| | | | | | | | | Description: In some situations it was possible for the fill value to not be written to parts of a chunked dataset, particularly when extending and/or shrinking. Prior to the fix for the chunk cache (1015) these bugs would have been exceedingly rare. Tested: jam, smirom, linew (h5committest)
* [svn-r16506] Snapshot version 1.9 release 32HDF Tester2009-02-221-1/+1
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* [svn-r16484] Snapshot version 1.9 release 31HDF Tester2009-02-151-1/+1
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* [svn-r16480] Purpose: Improve chunk cacheNeil Fortner2009-02-121-0/+2
| | | | | | | | | | | Description: The meaning of the "nbytes" field in H5D_rdcc_t was not clear, and some places assumed it was the maximum size of the chunk cache, while some assumed it was the current size of the chunk cache. The end result was that only 1 chunk could be held in cache at a time. This field has been replaced by "nbytes_max" and "nbytes_used". Performance of cached I/O should improve greatly. Tested: jam, smirom (h5committest)
* [svn-r16479] Fixed date in RELEASE.txt for last commit.Neil Fortner2009-02-121-1/+1
| | | | Tested: kate
* [svn-r16477] Purpose: Fix problem with opening an attribute multiple times ↵Neil Fortner2009-02-121-0/+2
| | | | | | | | | | | | | | | through multiple file handles. Description: An attribute's "oloc" field which specifies the file it resides in was located in the attribute's "shared" structure. So when an attribute was opened multiple times all of the handles for that attribute pointed to the same file id, even if different file id's were used to open the different handles for the attribute. The "oloc" has been moved to the top level H5A_t struct. Tested: jam, smirom (h5committest)
* [svn-r16475] Purpose: Fix rare error when adding a new object header messageNeil Fortner2009-02-121-0/+2
| | | | | | | | | | | | Description: Since the new object header format, it has been possible for a situation to be created where none of the messages are large enough to hold a continuation message and there are no null messages to merge with. This makes it impossible to add a new object header chunk. This case will now be handled by moving every message in the last chunk to the newly allocated one, except for null messages which are deleted. Tested: jam, smirom (h5committest)
* [svn-r16473] Purpose: fix problems related to 'self-referential' attributesNeil Fortner2009-02-121-2/+5
| | | | | | | | | | | | Description: When an attribute was created with a datatype or dataspace that was shared in the same object header that the attribute was in, the attribute could not be deleted. Changes made to ensure that the attribute can be deleted both when the attribute is in the object header and when it is shared in the heap. Object header message decode routines now take an "open_oh" parameter to enable them to avoid opening the same object header twice. Tested: jam, smirom (h5committest)
* [svn-r16457] Fix a typo in INSTALL_Windows.txt.Neil Fortner2009-02-101-1/+1
| | | | Tested: Notepad
* [svn-r16453] Snapshot version 1.9 release 30HDF Tester2009-02-081-1/+1
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