| Commit message (Collapse) | Author | Age | Files | Lines |
| |
|
|
|
|
|
|
|
|
|
|
|
| |
Description: The optimized "subset" compound conversion function would
improperly copy the "blank" space at the end of compound types. Modified
H5T_conv_struct_init to detect when the subset type has extra space at the end,
and calculate the size of the data that should be copied into the conversion
buffer for each element. Changes to the functions that implement these
conversions.
Tested: kagiso, linew, smirom (h5committest)
|
|
|
|
|
|
|
|
|
|
| |
Description: Adds capability to h5ls to traverse external links when the -r
(recursive) option is given. Changes to the way absolute path names are patched
in h5trav.c. Changes to the way recursive traversal starting from a non-root
group is handled (which also fixes some preexisting issues). Tests added for
these cases.
Tested: kagiso, smirom, linew (h5committest)
|
| |
|
|
|
|
|
|
| |
Description: Added configure test to see if pointer alignment restrictions are enforced (as in dereferencing an unaligned pointer causes an error). Added code in H5Tvlen.c to avoid dereferencing unaligned pointers, conditionally compiled based on the configure test. Added test case in dtypes.c which would previously cause such machines to fail.
Tested: kagiso, smirom, linew (h5committest); linew64
|
| |
|
| |
|
| |
|
| |
|
| |
|
|
|
|
| |
Update release notes for last bug fix.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
reference count
> 1.
Description: Added a new field 'app_count' to H5I_id_info_t struct, to track
the reference count on an id due to the application. the old 'count' field
tracks the total. Generally any id visible to the application gets placed
in app_count. Added app_ref boolean parameter to H5I_inc_ref, H5I_dec_ref,
H5I_register, H5I_clear_type, and a few other functions, to specify whether
the operation(s) being performed on the id(s) are due to the application
(TRUE) or not (FALSE). Test added for this case.
Tested: kagiso, smirom, linew (h5committest)
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
files with incorrect
datatype versions are encountered.
Description: The library now recognizes some problems with datatype versions in
H5O_decode_helper(), and, if not performing strict format checks, automatically
corrects them. Framework added for other message decode routines to
automatically correct file errors. Datatype version information added to
h5debug.
Tested: kagiso, smirom, linew (h5committest)
|
|
|
|
|
|
|
| |
Added notes about:
- bugzilla 1068: revising class hierarchy to move Attribute out.
- replacing IdComponent::dereference with new H5Object member functions
and constructors in various other classes.
|
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
mounted files.
Description:
Moved mount table from top file structure to shared file structure. Moved
parent out of mount table and back into top file structure. Mounted files can
now be accessed from any handle of the parent file. Changes to how files are
closed. Stricter cycle checking on mounted files. Removed unused function
H5F_has_mount().
Tested:
committest in 1.8 branch. Committing now due to the urgency of the fix. No
changes here are specific to the trunk, but I will keep an eye on the daily
tests.
|
| |
|
| |
|
|
|
|
|
|
|
|
|
|
|
| |
one of the handles,
the file didn't have the data. It happened because each handle had its own
object structure, and the empty one overwrote the data with fill value. This is
fixed by making some attribute information like the data be shared in the
attribute structure.
Tested on smirom, kagiso, and linew.
|
| |
|
|
|
|
|
| |
Update release notes for file mounting bug fix and adding 'mounted' flag
to H5G_info_t.
|
| |
|
| |
|
|
|
|
|
|
|
|
|
|
| |
Description:
Write documentation for building HDF5 with the latest version of Visual Studio, 2008. The process is very similar to building with Visual Studio 2005, but with an automatic project-file conversion beforehand.
Also adapt commandline build scripts for Visual Studio 2008 as well.
Tested:
VS2008 on WinXP
|
|
|
|
|
| |
Description:
When specifying library search path in Visual Studio, use the DLL folder for zlib. Previously we pointed to the "lib" folder, which was causing confusion.
|
|
|
|
|
|
|
|
|
|
|
|
| |
and Windows command line
Description:
Modify Windows documentation to support Intel Visual Fortran 10.1. We have tested it in our Virtual machines, and have fixed the problems we were encountering.
Also, add a new parameter to the hdf5build.BAT and hdf5bt.BAT build scripts to support IVF 10.1.
Tested:
VS2005 with IVF 9.1 and 10.1 on 32-bit XP
|
| |
|
| |
|
|
|
|
|
|
|
| |
attributes
was done incorrectly. Removed printing of attributes when doing binary
output. PVN - 2008/06/05
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Fixed bug in h5ls that prevented relative group listings (like
"h5ls foo.h5/bar") from working correctly.
Tested on:
FreeBSD/32 6.2 (duty) in debug mode
FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
in debug mode
Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Mac OS X/32 10.5.3 (amazon) in debug mode
Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
|
|
|
|
|
|
|
|
| |
Description: Removing make target "check-perform". The extra target is unneeded
because the perform tests don't take as long to run as initially
anticipated, and can be lumped in with 'make check'.
Tested: kagiso
|
|
|
|
| |
recommendations.
|
|
|
|
|
|
|
|
| |
Description: The configure option --disable-sharedlib-rpath will disable
embedding of the '-Wl,-rpath' information into executables
when shared libraries are produced.
Tested: kagiso
|
|
|
|
|
|
|
| |
Description: cleaning up configure related to removal of --disable-hsizet
flag, which we no longer support.
Tested: kagiso
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Description:
-- INSTALL_Windows.txt:
-- Update szip version number to 2.1
-- Extra details for setting up 64-bit builds
-- Explain adding HDF5 link settings more clearly
-- Add link to FAQ
-- Misc. typos and formatting
-- INSTALL_Windows_From_Command_Line.txt
-- Add note about 64-bit support
-- INSTALL_Windows_Short_NET.TXT
-- Add notes detailing features unsupported on VS.NET
-- INSTALL_Windows_Short_VS2005.TXT
-- Add notes about extra features.
|
|
|
|
|
| |
Description:
Small changes to the documentation-- update version strings to 1.8.1 and document the HDF5TestExpress variable
|
|
|
|
|
|
|
|
| |
Description:
Small changes, such as commenting out an additional test and fixing the search path, have been added to the MinGW install instructions.
Tested:
MinGW on WinXP
|
|
|
|
|
|
| |
the external link
points to. (PVN - 2008/05/12)
|
|
|
|
|
|
|
|
|
|
| |
Description: new autotool version information was missing from 1.9
documentation. It was added to 1.8, but I forgot to put it in
the trunk when I did that update. It's there now.
New versions: Automake 1.10.1, Libtool 2.2.2
Tested: none needed, doc update only.
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
Description: Tests in perform directory were never getting run, and
h5perf* programs were not being installed.
Solution: Added another build option, 'make check-perform', which runs the
tests in the perform directory. Also modified the Makefiles in the
perform directory to install (with 'make install') h5perf when
parallel is enabled, and h5perf and h5perf_serial when parallel
is disabled.
Tested: kagiso, smirom, linew
|
| |
|
|
|
|
| |
printf regarding floating point numbers
|
| |
|
| |
|
|
|
|
| |
New fortran wrappers added.
|
| |
|
|
|
|
|
| |
Description:
Added notes about fixes on bugzillas 1045 and 1056.
|
| |
|
| |
|