| Commit message (Collapse) | Author | Age | Files | Lines |
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metadata optimizations.
- rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library
tested on bb-8 with parallel and serial.
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checks from metadata dxpls
- remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead.
- remove flush_me_collectively flag from cache entries
- add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit.
tested on BB-8 with serial and parallel.
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Normalize against incoming changes from the phdf5_metadata_opt branch.
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest forthcoming)
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Normalize against changes on phdf5_metadata_opt branch to trunk
Tested on:
MacoSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest forthcoming)
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- fix farray, earray, and btree test to use correct function to retrieve internal file struct.
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Normalization changes against revise_chunks branch.
Tested on:
MacOSX/64 10.11.1 (amazon) w/serial & parallel
(h5committest forthcoming)
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Add internal library callback to H5S_select_iterate to avoid having
to pass hid_t objects internally
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Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
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Align w/vds branch: Whitespace cleanup, move common code for opening a
dataset into a new routine, misc. style cleanups.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest upcoming)
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- allocate sieve buffer with calloc instead of malloc
tested with h5committest
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make a higher level wrapper object around all VOL objects that
includes the VOL information.
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plugin hid_t instead
- rework the private VL layer to use the class structure directly
- some bug fixes
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symmetrical to VFDs and allow new functionality to be implemented
later.
+ some Bug fixes
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down to H5Fint.c
- move is_HDF5 inside deprecated macros in H5Fpublic.h
- move H5ES_status_t outside of H5VLpublic.h to H5ESpublic.h
- rename public properties in H5VLpublic.h to H5VL_PROP_* to add more scoping
- no need to include private if pkg is included in H5VLnative.c
- rename plist_id to lapl_id in loc_params structs
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- uncomment tests to check error output in Makefiles.
- fix bug in native implementation of H5Aiterate.
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tested with h5committest.
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Begin process of migrating from using property list IDs internally to the
library to using the internal generic property list data structure.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel
(h5committest forthcoming)
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Check in Neil's changes for correctly handling case where library is
reinitialized through a deprecated routine.
Tested on:
Linux 2.4.x/32 (jam)
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plugin create the ID if the datatype is committed.
This makes it consistent with other get operations in the VOL that
return an ID.
Tested: Jam
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Fixed several conflicts, mostly because calling API routines internally was removed from several places in the trunk.
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Clean up warnings, switch library code to use Standard C/POSIX wrapper
macros, remove internal calls to API routines, update checkapi and checkposix
scripts.
Tested on:
Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN
Big-Endian Linux/64 (ostrich)
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protection measures:
1. If any opened object uses the filter, let it fail.
2. Flush all opened files to push any cached data to files.
Tested with h5committest.
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- change hid_t req in callbacks to void **req
- change all callbacks to accept dxpl_ids (except dataset write and read which already do)
- update all the private and public VL routines to accept a dxpl_id and event queue id
- Add an async class for the VOL plugin with cancel, test, and wait request operations
- add the external VOL log plugin test to the examples directory
NOTE that async operations are still not provided by the HDF5 API, so
all event queue IDs and requests passed to all plugins are NULL for
now.
Tested on jam.
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Refactor ID class registration to be more like how other "class"s in the
library are registered, and clean up compiler warnings.
Tested on:
Mac OSX/64 10.7.4 (amazon) w/debug
(Too minor to require h5comittest)
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match what the RM says about the function behavior.
Quincey added it some time ago without realizing it caused test errors (Issue 8072).
Tested on ostrich, MacGoblin - simple change.
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move ref count management on the VOL struct inside the VLint code
- H5Freopen still needs to be handled
create the public interface for VOL callbacks:
- unresolved issue with var_args
update and create new API fapl calls to support stacking drivers:
- need to add fapl copy callback
fix a memory leak with registration of external plugins
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move the dataset ID registration to H5Dint where the term_interface func is located
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- change how the vlose routine is registered with VOL IDs
- some bug fixes
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- still some unresolved issues with named datatypes
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the API level for the native implementation
- work on fixing the named datatype issue.. still not resolved
- branch still not stable and tests do not pass at this point
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pointers and public VL structure instead of IDs.
tests will fail now because of named datatypes.
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move them to the VOL public header.
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ID, and
store the VOL plugin in an auxilary structure in the ID pointer.
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plugin to pass a NULL request
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Clean up more FUNC_ENTER/FUNC_LEAVE macros and move H5D & H5T code toward
the final design (as exemplified by the H5EA & H5FA code).
Tested on:
Mac OSX/64 10.7.3 (amazon) w/debug & parallel
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use the VOL get_space instead of the API routine in vlen_get_size
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