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* [svn-r28671] Implement initial VDS support for IOD plugin. Still missing ↵Neil Fortner2015-12-151-4/+4
| | | | | | | | full support for checksums, printf/unlimited selections, vlens, and nested VDSs. Tested: lola-17
* [svn-r27972] merge from trunk.Mohamad Chaarawi2015-10-061-39/+99
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| * [svn-r27946] Brought VDS branch in sync with trunk (up to r27945).Dana Robinson2015-10-041-37/+11
| |\ | | | | | | | | | | | | | | | | | | | | | Tested on Ubuntu 15.04 (Linux 3.19 x86_64), gcc 4.9.2, MPICH 3.1.4 and CMake 3.3.2. - Autotools serial w/ Fortran, C++ - Autotools parallel w/ Fortran - CMake serial w/ Fortran, C++
| | * [svn-r27939] Remove H5D__iterate and use H5S_select_iterate directlyJerome Soumagne2015-10-021-37/+11
| | | | | | | | | | | | | | | Add internal library callback to H5S_select_iterate to avoid having to pass hid_t objects internally
| * | [svn-r27835] Description:Quincey Koziol2015-09-211-82/+206
| |\ \ | | |/ | | | | | | | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * | [svn-r27630] Description:Quincey Koziol2015-08-311-47/+56
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring in changes from the trunk, through r27628. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest not required on this branch)
| * | | [svn-r27538] Add tests to cover remaining code coverage assertions in src ↵Neil Fortner2015-08-201-1/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | directory except for those in H5Doh.c and H5Shyper.c. Tested: ummon
| * | | [svn-r27505] Add support for H5Dset_extent for VDS.Neil Fortner2015-08-141-4/+26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Add tests for this. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
| * | | [svn-r27504] Change comments/code around to reflect decision to have virtual ↵Neil Fortner2015-08-131-3/+9
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | datasets always return TRUE when their is_alloc function is called. Tested: ummon
| * | | [svn-r27323] Implement support for H5Dflush for VDS.Neil Fortner2015-07-021-7/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Implement support for H5Ocopy on VDS. Testing for H5Ocopy on VDS. Fix check-vfd failure. Other minor fixes/cleanup. Note there is a preexisting failure in h5repack testing. Tested: ummon
| * | | [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-111-3/+3
| |\ \ \ | | | | | | | | | | | | | | | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| * | | | [svn-r27145] Add some testing for printf-style source dataset name resolution.Neil Fortner2015-06-031-1/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Various bug fixes, including a temporary fix for printf with FIRST_MISSING view. Other cleanup. Tested: ummon
| * | | | [svn-r27104] Add support for printf-style source dataset name resolution.Neil Fortner2015-05-221-6/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Passes use case test, no regression tests yet. Add functions H5Pset/get_virtual_printf_gap (not tested yet). Other minor fixes/cleanup. Tested: ummon
| * | | | [svn-r27103] Merge revisions 26780 through 27102 from trunk to vds branch.Neil Fortner2015-05-211-19/+99
| |\ \ \ \ | | | | | | | | | | | | | | | | | | Tested: ummon
| * | | | | [svn-r27022] Add new functions H5Pset_virtual_dataspace_bounds andNeil Fortner2015-05-051-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | H5Pget_virtual_dataspace_bounds. Minor refactor of dataset initialization code to make this cleaner. Update h5_vds-percival-unlim-maxmin.c Other minor fixes/cleanup. Tested: ummon
| * | | | | [svn-r26962] Add support for unlimited selections to VDS code.Neil Fortner2015-04-291-0/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Not tested (except for percival-unlim example) Fix percival-unlim example Other bug fixes/cleanup Tested: Fedora 64
| * | | | | [svn-r26862] Fix bug in H5D__get_storage_size where it would issue an error ↵Neil Fortner2015-04-211-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | unnecessarily for virtual datasets. Tested: ummon
| * | | | | [svn-r26411] Add support for I/O in very simple cases (virtual mapping and ↵Neil Fortner2015-03-091-2/+78
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | file space are both H5S_ALL). Note make check fails in h5dump test (unrelated to this checkin). Tested: ummon
| * | | | | [svn-r26296] Merge r26050 through 26295 from trunk to vds branch.Neil Fortner2015-02-241-12/+16
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| * | | | | | [svn-r26261] Commit working but incomplete prototype. Does not perform I/O.Neil Fortner2015-02-201-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested: ummon
| * | | | | | [svn-r26198] INCOMPLETE, UNWORKING CODENeil Fortner2015-02-171-1/+22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Commit progress through 1610 CST 2/17/15
* | | | | | | [svn-r27959] - merge from trunk (pre-VDS)Mohamad Chaarawi2015-10-051-42/+128
|\ \ \ \ \ \ \ | | |_|_|_|_|/ | |/| | | | | | | | | | | | - fix VOL initialization and Native plugin registration with new FAPL changes
| * | | | | | [svn-r27811] Description:Quincey Koziol2015-09-161-42/+128
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Refactor property list code to "deep copy" properties in the correct way, retraining the rest of the library to copy & release things correctly. This cleans up another batch of memory leaks, etc. within the library. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (h5committest forthcoming)
* | | | | | | [svn-r27777] merge from trunk.Mohamad Chaarawi2015-09-141-84/+190
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| * | | | | | [svn-r27768] Description:Quincey Koziol2015-09-141-40/+73
| | |_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
| * | | | | [svn-r27618] Description:Quincey Koziol2015-08-291-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Align w/vds branch: Remove extraneous sieve buffer flush in chunk flush callback, and move error check out of the middle of retrieving properties for dataset. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
| * | | | | [svn-r27615] Description:Quincey Koziol2015-08-291-40/+47
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Protect dataset that's closing from being flushed again, if it's the last one holding a file open. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
| * | | | | [svn-r27612] Description:Quincey Koziol2015-08-291-3/+67
| | |_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Align w/vds branch: Whitespace cleanup, move common code for opening a dataset into a new routine, misc. style cleanups. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest upcoming)
* | | | | [svn-r27141] merge from trunk.Mohamad Chaarawi2015-06-031-3/+3
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| * | | | [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-011-3/+3
| | |_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* | | | [svn-r27090] merge from trunk.Mohamad Chaarawi2015-05-151-2/+40
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| * | | [svn-r27058] Description:Quincey Koziol2015-05-131-2/+40
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Convert internal chunk structures to use 'scaled' coordinates instead of absolute coordinates. Tested on: Mac OSX/64 10.10.3 (amazon) w/parallel & serial Linux 2.6.x/32 (jam) w/parallel & serial Linux 2.6.x/64 (koala) w/serial
* | | | [svn-r27050] merge from trunk.Mohamad Chaarawi2015-05-111-17/+59
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| * | | [svn-r26993] Description:Quincey Koziol2015-05-021-2/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Align w/incoming chunk performance changes, including some small performance improvements here, as well as a few minor general code cleanups. Tested on: Mac OSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5committest)
| * | | [svn-r26842] Description:Quincey Koziol2015-04-181-16/+59
| | |/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | Cache the dataset's rank & dimension sizes, instead of querying them frequently, to speed up various checks & algorithms. Also, a few minor cleanups. Tested on: MacOSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.18 (jam) w/serial & parallel
* | | [svn-r26724] - merge from trunk & fix conflicts.Mohamad Chaarawi2015-04-031-13/+18
|\ \ \ | |/ / | | | | | | | | | - fix bug in opending an already open named datatype. - fix dynamically loaded VOL plugin support with new changes coming in.
| * | [svn-r26213] Description:Quincey Koziol2015-02-181-12/+16
| |/ | | | | | | | | | | | | | | Minor code cleanups, to align with revise_chunks branch. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial
* | [svn-r25778] merge from trunk.Mohamad Chaarawi2014-11-041-4/+4
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| * [svn-r25766] Description:Quincey Koziol2014-11-031-4/+4
| | | | | | | | | | | | | | | | | | | | Revert r25273, 25283 & 25439 (the hyperslab improvement changes). They are buggy and it's taking me a long time to correct the problem. I'll check in a revised form of the changes when I've got them straightened out. Tested on: Mac OSX 10.10.0 (amazon) w/gcc 4.9.x, C++, FORTRAN Linux 2.6.x (jam) w/parallel
* | [svn-r25575] cleanup H5I usage in VOL by removing the use of the aux pointer andMohamad Chaarawi2014-09-051-10/+8
| | | | | | | | | | make a higher level wrapper object around all VOL objects that includes the VOL information.
* | [svn-r25555] - rework the public H5VL wrappers to not use H5VL_t* and use a ↵Mohamad Chaarawi2014-08-261-1/+1
| | | | | | | | | | | | | | plugin hid_t instead - rework the private VL layer to use the class structure directly - some bug fixes
* | [svn-r25537] VOL framework changes.Mohamad Chaarawi2014-08-191-1/+1
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* | [svn-r25521] major rework of the internal setup of VOL plugins to make it moreMohamad Chaarawi2014-08-081-1/+0
| | | | | | | | | | | | | | symmetrical to VFDs and allow new functionality to be implemented later. + some Bug fixes
* | [svn-r25502] merge from trunk.Mohamad Chaarawi2014-07-311-8/+14
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| * [svn-r25496] Description:Quincey Koziol2014-07-301-8/+14
| | | | | | | | | | | | | | | | | | Merge 64-bit ID changes from branch to trunk. (Plus a few minor cleanups that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* | [svn-r25471] merge from trunk and resolve conflicts.Mohamad Chaarawi2014-07-231-0/+1
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| * [svn-r25468] some code refactoring to align trunk with VOL branch.Mohamad Chaarawi2014-07-221-0/+269
| | | | | | | | tested with h5committest.
* | [svn-r25463] more aligning with trunk.Mohamad Chaarawi2014-07-221-1/+1
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* | [svn-r25275] merge from trunk.Mohamad Chaarawi2014-06-131-4/+4
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| * [svn-r25273] Description:Quincey Koziol2014-06-131-4/+4
| | | | | | | | | | | | | | | | | | | | | | Bring in Chao/Neil/my changes to optimize hyperslab selection operations further, along with 3 new public API routines: H5Scombine_hyperslab(), H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to the code and fixing a few compiler warnings. Tested on: Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI (h5commttest forthcoming)
generated by cgit v0.12 at 2024-11-09 09:38:25 (GMT)