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* | Clean up remaining warningsJordan Henderson2017-07-061-6/+21
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* | Add prototype for H5D__cmp_filtered_collective_io_info_entry_ownerJordan Henderson2017-07-051-0/+2
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* | Add comment for memory copy possibly not being necessary anymore forJordan Henderson2017-07-051-0/+1
| | | | | | Multi-Chunk I/O
* | Remove use of H5E_CANTDISTRIBUTE errorJordan Henderson2017-07-051-1/+1
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* | Add comment for full overwrite special caseJordan Henderson2017-07-051-0/+8
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* | Add remaining documentation/commentsJordan Henderson2017-07-051-23/+54
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* | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Jordan Henderson2017-07-051-6/+4
|\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '6428a637752753cc8a9007c0c3c38b9ea9cc97fd': (165 commits) Skip HDFFV-10160 filenotclosed test for split/multi driver Temporary skip this test for split/multi driver. Further investigation to resolve the failure is needed. Please enter the commit message for your changes. Lines starting More minor whitespace cleanup Fixed a minor comment typo in H5R.c * Reverted removal of H5I_REFERENCE to avoid breaking binary compatibility. * Added a quick H5I_REFERENCE smoke check to test_misc19() in tmisc.c. Added missing free() call to test_misc19(). Purged the unused H5I_REFERENCE from the library. Added a test for VFD IDs to testhdf5. Revert "Partial removal of NDEBUG ifdefs from the library." Partial removal of NDEBUG ifdefs from the library. Removed compiler flag cleanup since Solaris chokes on it. Fix for HDFFV-10160 Modifications to fix the assertion/abort failure when the application does not close the file. Fixed a bug in autotools Fortran processing where a test for the presence of a C long double type always returned true. Updated the --enable-debug/production handling in configure.ac so that it more reliably indicates that the configure option can no longer be used. Previously, using --enable-debug="", etc. would not trigger an error (even though such usage is unlikely). Added awk processing to remove extraneous whitespace from H5_ flags in configure. Fixed a comment in configure.ac HDFFV-10219 another mode change HDFFV-10219 change subset to use BINARY mode for h5dump HDFFV-10219 default input binary to NATIVE Set default of var to NATIVE HDFFV-10219 - disable h5dump tests until h5import NATIVE is fixed ...
| * | Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| |/ | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* | Revise shared chunks redistribution algorithmJordan Henderson2017-05-011-23/+25
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* | Separate shared chunks redistribution code out to its own functionJordan Henderson2017-05-011-207/+245
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* | Fix deadlocking issueJordan Henderson2017-04-131-58/+98
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* | Fix link-chunk I/O by tidying up local_info_arrayJordan Henderson2017-04-131-12/+13
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* | Minimize size of H5D_filtered_collective_io_info_t structJordan Henderson2017-04-111-204/+102
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* | Revise first-phase algorithm to only use rank 0 for redistributionJordan Henderson2017-04-101-24/+155
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* | Add commentsJordan Henderson2017-04-101-2/+3
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* | In current implementation, list must be gathered to allJordan Henderson2017-04-091-1/+1
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* | Correct error with usage of array_gather functionJordan Henderson2017-04-091-3/+3
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* | Make array_gather routine more generalJordan Henderson2017-04-091-45/+66
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* | Updated commentsJordan Henderson2017-03-301-20/+17
| | | | | | | | changed variable name for list containing all chunks in the I/O operation
* | Add comments to H5D_filtered_collective_io_info_t data structureJordan Henderson2017-03-301-11/+11
| | | | | | | | Correct comment and error message about retrieving the threshold for performing either Linked-chunk or Multi-chunk I/O
* | Remove debugging statementsJordan Henderson2017-03-301-342/+6
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* | removed erroneous casts from non-rvalue H5MM_free() calls. Replaced ↵Frank T Willmore2017-02-211-6/+12
| | | | | | | | assignment of void return values with explicit value of NULL
* | Fix issue with uninitialized chunk index during chunk re-insertion intoJordan Henderson2017-02-201-2/+12
| | | | | | index
* | Remove potential infinite loops caused by goto in error label regionJordan Henderson2017-02-101-3/+3
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* | Remove note about src_type_size vs dst_type_sizeJordan Henderson2017-02-091-1/+0
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* | Fix issue in H5D__mpio_array_gather when no one contributes anythingJordan Henderson2017-02-031-22/+28
| | | | | | | | Fix issue in Multi-chunk IO where IO would crash if no one has a selection
* | Iterator for initial chunk entry IO operation should use source datatypeJordan Henderson2017-02-031-1/+1
| | | | | | size
* | Fix bug where data doesn't write correctly when MEMSPACE isnt the sameJordan Henderson2017-02-031-7/+33
| | | | | | as FILESPACE
* | Check return value of H5S_GET_EXTENT_NPOINTS macroJordan Henderson2017-02-021-13/+31
| | | | | | | | | | Fix bug where a process with no selection during Multi-chunk IO could cause other processes to copy back incorrect chunk information after chunk re-allocation
* | Fix macro complaint in H5Dmpio.cJordan Henderson2017-02-021-3/+15
| | | | | | Fix debugging file output for test suite
* | Test code for user passing one-chunk-per-process hint to libraryJordan Henderson2017-01-311-7/+15
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* | Implement realloc strategy when receiving data modification messagesJordan Henderson2017-01-311-10/+19
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* | Add minor error code for H5D__mpio_array_gather failuresJordan Henderson2017-01-301-25/+22
| | | | | | | | | | | | Catch case where total IO size is greater than chunk size (Overlapping write) Update full chunk overwrite code to not need MPI calls
* | Add mechanism for determining if a chunk is being fully overwrittenJordan Henderson2017-01-301-36/+60
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* | Add back debugging statementsJordan Henderson2017-01-301-4/+300
| | | | | | | | Move conditional check inside while loop in construct_filtered_io_info_list
* | Remove Debugging Statements for Code ReviewJordan Henderson2017-01-271-310/+5
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* | Remove unnecessary num_chunks_selected_array fromJordan Henderson2017-01-271-29/+20
| | | | | | H5D__construct_filtered_io_info_list
* | Multiple Bug FixesJordan Henderson2017-01-261-102/+121
| | | | | | | | | | Add comments explaining different variables Check more overflow/conversion sign change issues
* | Fix bug with chunk data updatingJordan Henderson2017-01-261-67/+68
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* | Test code for sending chunk modification data aroundJordan Henderson2017-01-241-10/+190
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* | Clean up H5Dmpio.c warningsJordan Henderson2017-01-201-30/+34
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* | For sake of complexity, force multi chunk IO for parallel filtered readJordan Henderson2017-01-191-2/+13
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* | Code refactoringJordan Henderson2017-01-191-157/+197
| | | | | | | | | | | | | | | | Modify single chunk entry function to handle both read and write cases Store array of MPI derived types in Multi-chunk IO so that all freeing can be done at end instead of during processing Add read support for Multi-chunk IO only currently
* | Clean up const and other warningsJordan Henderson2017-01-181-30/+28
| | | | | | Add notes about need for another minor error code
* | Update documentation for link and multi chunk IOJordan Henderson2017-01-181-43/+46
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* | Major cleanupJordan Henderson2017-01-181-475/+303
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Separate update phase for chunk entry into its own function, since code for multi-chunk IO and link-chunk IO is exactly the same Remove last IO mode code from multi-chunk IO, since filtered collective writes cannot break to independent IO mode Fix collective overlapping IO for multi-chunk IO by iterating equal to the max number of chunks on any process Make hard separation between collective read and write since trying to mix the two into one loop becomes messy Add preliminary code for asynchronous sending of chunk modification data to new owning process when redistributing chunks
* | Add chunk redistribution for shared chunksJordan Henderson2017-01-171-190/+248
| | | | | | Remove check for process having a selection as this needs to be reworked
* | Eliminate owner fieldJordan Henderson2017-01-131-15/+11
| | | | | | Work on redistributing shared chunks
* | Switch working branch from master to developJordan Henderson2017-01-131-18/+1382
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* [svn-r29057] added dxpl type checking when debug mode is enabled ↵Mohamad Chaarawi2016-02-071-12/+12
| | | | | | (H5_DEBUG_BUILD) tested on bb-8 with Serial and Parallel, debug and production builds.
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