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| * Move (final?) file operation from directly calling into library code to usingQuincey Koziol2018-10-271-7/+5
| | | | | | | | the file_optional VOL callback.
| * Remove some VOL-specific internal coding.Quincey Koziol2018-10-271-20/+2
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| * Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-10-251-9/+9
| |\ | | | | | | | | | stackable_vol
| | * Updates to the VOL ID and object API calls.Dana Robinson2018-10-171-6/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This brings the H5VL code in line with the H5I code regarding naming, parameter order, etc. Several public API calls were affected by this change. These changed names to reflect their use with VOL drivers: H5VLregister() --> H5VLregister_driver() H5VLregister_by_name() --> H5VLregister_driver_by_name() H5VLunregister() --> H5VLunregister_driver() H5VLis_registered() --> H5VLis_driver_registered() This call was renamed to match H5Iregister(). The order of the first two parameters also reversed and the object pointer is now const. H5VLobject_register() --> H5VLregister()
| * | Squashed commit of private branch changes to support stackable VOL plugins.Quincey Koziol2018-10-251-98/+78
| |/ | | | | | | modified: test/dsets.c
| * Fixed a C++ style commenting issue and removed an unused fieldDana Robinson2018-10-121-2/+0
| | | | | | | | from H5F_trav_obj_ids_t.
| * VOL FEATUREDana Robinson2018-10-101-366/+267
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| * Remainder of vol_normalization changes (dataset, attribute, files, objects).Dana Robinson2018-09-241-256/+516
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| * Normalization with vol_integration (misc internal and datatype)Dana Robinson2018-09-201-81/+90
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| * Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-09-181-10/+17
| | | | | | | | orginally intended to support the full SWMR feature.
* | Stash work on object header reduction code and tests.Jacob Smith2018-09-111-0/+94
|/ | | | CMake stuff is not verified.
* Normalization with vol_integration branch.Dana Robinson2018-06-071-1/+1
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* Minor warning cleanup while working on VOL issues.Dana Robinson2018-04-061-1/+1
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* Merge remote-tracking branch 'origin/develop' into merge_func_enter_volQuincey Koziol2018-04-011-112/+9
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| * Created internal functions for a couple of H5F calls.Dana Robinson2018-03-301-248/+14
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* | Remove redundant 'is_collective' parameter from H5CX_set_loc.Quincey Koziol2018-03-271-3/+3
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* | Cleanup API context function usage.Quincey Koziol2018-03-191-117/+19
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* | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-03-181-29/+103
|\ \ | |/ | | | | | | | | merge_func_enter_vol Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
| * Enhancement to the tool h5clear (HDFFV-10360)Vailin Choi2018-03-121-7/+87
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| * Changes made based on code reviews.Vailin Choi2018-01-121-8/+10
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| * Merge branch 'develop' into bugfix/version_boundsVailin Choi2017-12-081-93/+74
| |\ | | | | | | | | | Merge from develop.
| * \ (1) Merge branch 'develop' into bugfix/version_boundsVailin Choi2017-11-251-434/+278
| |\ \ | | | | | | | | | | | | | | | | | | | | (2) Add two new options to h5repack for low and high bounds as in H5Pset_libver_bounds. (3) Modify message pre_copy callbacks so that H5Ocopy can handle version bounds check. (4) Add version bounds check for cache image feature.
| * | | Initial checkin for library version boundsVailin Choi2017-10-031-16/+10
| | | | | | | | | | | | | | | | Code changes to provide versioning support when adding to the enumerated defines for H5F_libver_t.
* | | | Add API context interface and use it throughout the library.Quincey Koziol2018-03-151-298/+185
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* | | Normalization with VOL integration branch.Dana Robinson2017-11-301-93/+74
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* | Remove tabsAllen Byrne2017-11-081-417/+277
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* | Moved the 'cache image + SWMR' check from H5Fcreate/open to H5F_open.Dana Robinson2017-10-191-17/+1
|/ | | | Prep for the VOL merge.
* Style cleanups and misc. bugfixes discovered during full SWMR development.Quincey Koziol2017-09-231-1/+5
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Minor style cleanupsQuincey Koziol2017-03-221-4/+3
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* Revert "Switch h5clear for cache images to use existing ↵Quincey Koziol2017-03-221-0/+41
| | | | | | H5Pget_cache_image_config()" This reverts commit dd5105fc9912c77f6d6074700d83e5e8282e86c9.
* Final merge of page buffering branch to developQuincey Koziol2017-03-141-1/+81
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* Bring changes to I/O parameters from page_buffering branch.Quincey Koziol2017-03-131-11/+13
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* Review changes to closing files on error in H5Fcreate.Quincey Koziol2017-01-311-41/+15
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* Cache image feature and testingQuincey Koziol2017-01-291-1/+91
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* Switch list lengths to unsigned integers (to align better w/cache image merge)Quincey Koziol2017-01-281-1/+1
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* Bring SWMR support in to the main development branch. (Finally!) More testsQuincey Koziol2016-12-021-4/+236
| | | | and the tool and API wrappers will be coming in over the weekend.
* Merge branch 'develop' into eoc_valgrind_bugfixDana Robinson2016-11-291-0/+97
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| * Bring over another batch (hopefully the last) of non-SWMR "normalization"Quincey Koziol2016-11-291-0/+97
| | | | | | | | changes from the revise_chunks branch.
* | Tentative fix for valgrind issues related to EoC.Dana Robinson2016-11-261-1/+1
|/ | | | | | | | | Adds /*out*/ parameters to H5O_close() and H5F_try_close() so that H5D/G_close() will know when H5O_close() has triggered a file close and thus the file struct is not reliable. Also removes the H5F_CLOSING() macro and related which were formerly used to check if the file was closing.
* Add public H5F* routines for cache logging.Quincey Koziol2016-11-041-0/+99
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* [svn-r29924] Description:Quincey Koziol2016-05-121-0/+70
| | | | | | | | Bring h5format_convert tool from revise_chunks branch to trunk. Tested on: MacoSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29842] Description:Quincey Koziol2016-04-301-24/+24
| | | | | | | | | Bring [appropriate portions of] r29811, 29813, 29826, 29830, 29831 from revise_chunks branch to the trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29548] Minor normalization w/ trunk in preparation for big merge.Dana Robinson2016-03-241-1/+0
| | | | | | Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial autotools parallel (MPICH 3.1.4)
* [svn-r29182] Re-commit of HDFFV-8740 fix, which adds the ability to configureDana Robinson2016-02-221-9/+6
| | | | | | | | | | | | external dataset storage path behavior. This check-in fixes a bug in the original check-in where the external path stored in the file struct was not copied on reopen causing subsequent dataset operations to fail. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial w/ fortran and C++ autotools parallel (MPICH 3.1.4) w/ fortran
* [svn-r29081] - merge in the phdf5_metadata_opt/ branch with the collective ↵Mohamad Chaarawi2016-02-101-13/+13
| | | | | | | | metadata optimizations. - rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library tested on bb-8 with parallel and serial.
* [svn-r28950] - remove META_FLUSH_COLLECTIVELY property for delayed sanity ↵Mohamad Chaarawi2016-01-211-9/+9
| | | | | | | | | | checks from metadata dxpls - remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead. - remove flush_me_collectively flag from cache entries - add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit. tested on BB-8 with serial and parallel.
* [svn-r28916] Description:Quincey Koziol2016-01-151-11/+7
| | | | | | | | Normalize against incoming changes from the phdf5_metadata_opt branch. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28894] Description:Quincey Koziol2016-01-141-4/+6
| | | | | | | | Normalize against changes on phdf5_metadata_opt branch to trunk Tested on: MacoSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27768] Description:Quincey Koziol2015-09-141-50/+20
| | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
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