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* 1 12 merges from develop (#412)Allen Byrne2021-03-031-3/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version * Merge workflow and minor changes from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge serval small changes from dev * fix typo * Minor non-space formatting changes * GH #386 copyright corrections for java folder * revert because logic requires false return * Merges from develop #358 patches from vtk #361 fix header guard spelling * Remove case statement for H5I_EVENTSET * Correct call with versioning * Remove tabs * Double underscore change
* Update URL in source file Copyright headers for web copy of COPYINGLarry Knox2021-02-201-1/+1
| | | | file - src and test directories.
* 1 12 Whitespace changes after clang-format run (#288)Allen Byrne2021-01-291-1/+3
| | | | | | | | | | | | | | | | | | | | | * OESS-98 fix tools test for plugins * sync fork * Merge of changes from dev * Move problem option to bottom of the list until fixed * HDFFV-11106 - fix parsing optional args * HDFFV-11106 add note * grammer fix * Whitespace after clang formatting * Undo format version 11 changes * Update check to working version
* Basic alignment with async branch (#115) (#137)Quincey Koziol2020-11-301-38/+38
| | | | | | | * Basic alignment with async branch - trivial changes to reduce clutter in overall diff. * Update minor error code to reflect change within library * Update the error output to match library
* Merge available RM doxygen from develop to hdf5 1 12 (#131)Larry Knox2020-11-261-32/+583
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Snapshot version 1.12 release 1-3. Update version to 1.12.1-4. * First cut of the H5 public API documentation. (#80) * First cut of the H5 public API documentation. * Added H5Z "bonus track." * Applied Quincey's patch. * Added the missing patches from Quincey's original patch. * H5PL (complete) and basic H5VL API documentation. * Added H5I API docs. * Added H5L API docs. * First installment from Elena's H5T batch. * Second installment of Elena's H5T batch. * Final installment of Elena's H5T batch. * Full set of current H5F documentation. (#105) * First cut of the H5 public API documentation. * Added H5Z "bonus track." * Applied Quincey's patch. * Added the missing patches from Quincey's original patch. * H5PL (complete) and basic H5VL API documentation. * Added H5I API docs. * Added H5L API docs. * First installment from Elena's H5T batch. * Second installment of Elena's H5T batch. * Final installment of Elena's H5T batch. * Migrated documentation for SWMR functions. * Catching up on MDC functions. * Integrated the H5F MDC function documentation. * Added MDC and parallel H5F functions. * Slightly updated main page. * Added doxygen/dox/H5AC_cache_config_t.dox to MANIFEST. * Doxygen - added (mostly) beginner functions (#112) * Doxygen - added (mostly) beginner functions * Removed duplicate H5Pset_szip function * Add src/H5module.h to MANIFEST. Co-authored-by: Gerd Heber <gheber@hdfgroup.org> Co-authored-by: bljhdf <58825073+bljhdf@users.noreply.github.com>
* Cherry pick of Minor/id code cleanup (#114) (#124)Dana Robinson2020-11-251-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | * Revert "Switch ID code to use a hash table instead of a skip list (#52)" This reverts commit a50d211755cb272b2e468144e7d892a4c90813c4. * H5I_id_type_t and H5I_class_t are no longer managed via free lists * Fixed commenting issues * Naming and commenting cleanup in H5I.c * H5I cleanup * Header cleanup * Commenting * More uniform naming * Renames H5I_id_type_t and related in H5I.c * Adds gcc pragmas to ignore H5I const casting * Split H5I code into multiple files * Rename id_type to simply type in H5I code * Minor typo in H5Itest.c
* Merge changes from developAllen Byrne2020-10-081-0/+6
| | | | | Comments and whitespace Skip file-locking and cache changes
* Source formattedAllen Byrne2020-10-011-39/+38
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* Added the map (H5M) APIDana Robinson2019-08-131-0/+1
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* New hyperslab selection routines and new public selection iterator routines.Quincey Koziol2019-06-161-0/+1
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* Removed H5I_REFERENCE from the library. It has always been unusedDana Robinson2018-12-081-4/+0
| | | | and has been marked 'deprecated' since 1.10.0. Fixes HDFFV-10252.
* VOL FEATUREDana Robinson2018-10-101-0/+5
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* Normalization with vol_integration (test code and H5Xtest.c)Dana Robinson2018-09-201-1/+1
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* * Reverted removal of H5I_REFERENCE to avoid breaking binaryDana Robinson2017-07-031-0/+3
| | | | | | compatibility. * Added a quick H5I_REFERENCE smoke check to test_misc19() in tmisc.c.
* Purged the unused H5I_REFERENCE from the library.Dana Robinson2017-07-011-1/+0
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* Added a test for VFD IDs to testhdf5.Dana Robinson2017-07-011-17/+17
| | | | | | | This required adding some code to generate a fake VFD class to pass to H5FDregister(). Also, a bunch of whitespace and comment tidying.
* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* [svn-r25496] Description:Quincey Koziol2014-07-301-2/+2
| | | | | | | | | Merge 64-bit ID changes from branch to trunk. (Plus a few minor cleanups that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r25450] Description:Quincey Koziol2014-07-211-2/+2
| | | | | | | | Initial tweaks to align with VOL branch. Tested on: Mac OSX/64 10.9.3 (amazon) w/gcc 4.9 (h5committest not required, too small)
* [svn-r17230] Description:Quincey Koziol2009-07-231-1/+1
| | | | | | | | | | | | | | | | | | | | | Various minor tuneups noticed in working on the revise_chunks branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.5.7 (amazon) in debug mode Mac OS X/32 10.5.7 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r16036] Purpose: add H5Iis_valid functionNeil Fortner2008-11-051-0/+1
| | | | | | | | | Description: H5Iis_valid function added. This function checks if the id is valid (i.e. it is currently registered and visible to the application), and returns TRUE if it is valid, or FALSE otherwise. It should never return an error. Tested: kagiso, linew, smirom (h5committest)
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r12842] Description:Quincey Koziol2006-11-021-1/+2
| | | | | | | | | | | | | | | | Refactor generic property list initialization code to put property list specific routines in property list modules, instead of scattered to the four winds. Also, introduce property list class initialization objects, to make adding new property list classes in the library easier. Fix daily test failure by using H5Pget_elink_prefix() API routine instead of looking at the "raw" generic property list information. Tested on: Mac OS X/32 10.4.8 (amazon) FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/C++ & FORTRAN Linux/64 2.4 (mir) w/build-all & 1.6 compat
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-1/+1
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r11093] Purpose:Quincey Koziol2005-07-211-1/+0
| | | | | | | | | | | | Bug fix Description: Rewrite code for mounting files to clean up layers of kludges and implement a much cleaner and more maintainable design. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4
* [svn-r10736] Purpose:Quincey Koziol2005-05-071-0/+1
| | | | | | | | | | | Code cleanup Description: Clean up some compiler warnings Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-11/+10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r8892] Purpose:Quincey Koziol2004-07-161-2/+2
| | | | | | | | | | | | | | Code cleanup Description: Clean up a bunch of warnings and bring new code better inline with current library coding practice. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest Misc. update:
* [svn-r8879] Raymond Lu2004-07-141-1/+0
| | | | | | | | | | | | | | Purpose: New feature Description: New API H5Tencode and H5Tdecode. Given object ID, H5Tencode encodes object information into a binary form. H5Tdecode decode an object information in a binary form, reconstructs the object and return a new object ID. Solution: Use object header functions H5O_dtype_decode and H5O_dtype_encode to facilitate them. The encoded binary is exactly like object header information. This is the first step checkin. Will check in H5Sencode and H5Sdecode later. Platforms tested: h5committed and fuss. Misc. update: will update release.txt after 2nd step checkin.
* [svn-r8767] Nat Furrer2004-06-301-1/+1
| | | | | | | | | | | | | | Purpose: Forgot to change H5Inmembers's return type in last commit... Description: Changed the number H5Inmembers returns by reference from int to hsize_t. Solution: Platforms tested: Misc. update:
* [svn-r8766] Nat Furrer2004-06-301-1/+2
| | | | | | | | | | | | | | | | | | | Purpose: Small H5I API changes. Description: Changed public version of H5Inmembers to return the number of IDs in a type by reference. This allows the user to differentiate between the case when H5Inmembers has an error and when the ID type is just empty. Added a new API function, H5Itype_exists, which allows the user to find out whether an ID type exists or not, without throwing an error. Solution: Platforms tested: Copper Misc. update:
* [svn-r8707] Changed the way HDF5 handles hid_t's and added API functions to ↵James Laird2004-06-181-18/+45
| | | | allow users to register IDs and ID types at runtime.
* [svn-r7932] Purpose:Quincey Koziol2003-12-111-2/+9
| | | | | | | | | | | Add new feature Description: Add new H5I{dec|get|inc}_ref() routines and tests for them. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7784] *** empty log message ***Raymond Lu2003-10-291-0/+1
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* [svn-r7302] Purpose:Quincey Koziol2003-08-081-1/+0
| | | | | | | | | | Code cleanup Description: Removed unused H5I_TEMPBUF group of IDs Platforms tested: h5committested
* [svn-r7256] Purpose: gradual checkin for error apiRaymond Lu2003-07-231-1/+0
| | | | Platforms tested: RH 8(simple checkin)
* [svn-r7225] Purpose: error API gradual checkinRaymond Lu2003-07-141-2/+2
| | | | Platforms tested: RH 8; c and c++
* [svn-r7212] Purpose: New error API design is being checked gradually.Raymond Lu2003-07-111-0/+3
| | | | Platforms tested: RH 8
* [svn-r6546] Purpose:Bill Wendling2003-03-311-11/+13
| | | | | | | | | | | | Update Description: Updated copyright statement in files which hadn't been updated yet. Platforms tested: Linux (Only comment change) Misc. update:
* [svn-r6149] ./hdf5-devel/src/H5Ipublic.hRobb Matzke2002-12-041-0/+3
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Purpose: Feature; Optimization Description: Clients pass `-1' or make their own #define for HDF5 functions that take an optional object ID. Blue's GPFS is slow for typical SAF restart dumps. Solution: Added a #define for H5I_INVALID_HID Added GPFS-specific code to H5FDmpiposix.c that tells mmfsd to forego byte range token prefetching. This code can be compiled into the library by defining USE_GPFS_HINTS. The plan is to either generalize this so it's detected during configure and turned on/off at runtime, or to move it up into DSL/SAF with the new HDF5 functions to that return the low-level file handle. Platforms tested: SuSE Linux (arborea), gcc and mpich-1.2.4 SunOS (baldric), gcc 2002-09-05 12:24:28 Robb Matzke <matzke@arborea.spizella.com> *: Added #define for H5I_INVALID_HID. An invalid object handle is actually any integer that isn't currently in use as a handle, and non-positive integers are never used as a handle. The #define is -1, and is mostly so that HDF5 users can pass a symbolic name instead of a negative number to functions that take optional object ID arguments.
* [svn-r5947] Purpose:Quincey Koziol2002-09-251-4/+1
| | | | | | | | | | | | | | | | Code cleanup Description: Clean up ID->name code: - Reformat to better match library coding standard - Changed several algorithms to be more efficient - Integrated into library more smoothly Platforms tested: eirene w/FORTRAN & C++ arabica w/FORTRAN modi4 w/FORTRAN & parallel sleipnir
* [svn-r5931] MuQun Yang2002-09-201-4/+4
| | | | | | | | | | | | Purpose: __DLL__ is a keyword in some platforms and __DLL__ is also defined as a macro for windows DLL applications. That causes problems. Description: Solution: Use H5_DLL*** to replace __DLL***__ at all header files. Change the macro defination at H5api_adpt.h. Platforms tested: linux2.2.18smp, irix64, solaris 2.7 and windows 2000
* [svn-r5904] Pedro Vicente Nunes2002-08-281-0/+4
| | | | | | | | | | | | | | | | | | | Purpose: Added 'ID to name' support Description: There is a new API function H5Iget_name Most of the changes are on H5G.c , regarding the symbol table entry struct H5G_entry_t which has 2 new fields 'name' and 'old_name' A new private function was introduced H5G_ent_copy, that does a deep copy between 2 symbol table entries The test file is getname.c Platforms tested: windows 2000, Linux, Solaris
* [svn-r4620] Purpose:Quincey Koziol2001-11-201-9/+0
| | | | | | | | | Code cleanup Description: Get rid of IDs from internal function calls and some small cleanups from the old-stype => generic property list conversion. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4324] Purpose:Quincey Koziol2001-08-101-6/+6
| | | | | | | | | | | | | | | | | | | | | | | | New Features! Description: Start migrating the internal use of property lists in the library from the older implementation to the new generic property lists. Currently, only the dataset transfer property lists are migrated to the new architecture, all the rest of the property list types are still using the older architecture. Also, the backward compatibility features are not implemented yet, so applications which use dataset transfer properties may need to make the following changes: H5Pcreate(H5P_DATASET_XFER) -> H5Pcreate_list(H5P_DATASET_XFER_NEW) and H5Pclose(<a dataset transfer property list>) -> H5Pclose_list(id) This still may have some bugs in it, especially with Fortran, but I should be wrapping up those later today. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r3781] Purpose:Bill Wendling2001-04-051-1/+1
| | | | | | | | | | | | | | | | | | Update Description: Changed #include <hdf_file.h> construct to #include "hdf_file.h" so that the GNU compiler can more easily pick up the dependencies which it places in the .depend and Dependencies files. Also regenerated the Dependencies to go along with this. Platforms tested: Linux
* [svn-r3304] Purpose:Quincey Koziol2001-01-181-1/+0
| | | | | | | | Code update Description: Remove ragged array code & tests from library before release. Platforms tested: FreeBSD 4.2 (hawkwind)
* [svn-r3162] Purpose:Quincey Koziol2000-12-201-2/+0
| | | | | | | | | | | | | Bug Fix Description: If the library was compiled with 'NDEBUG' defined, but the user's program (the fortran API in this case) was compiled with 'NDEBUG' not defined, the IDs returned from the library would appear to be incorrect. Solution: Removed 'ifndef NDEBUG' from around "H5I_TEMPLAX_MAX" definition and error checking. Platforms tested: Linux 2.2 (eirene) & FreeBSD 4.2 (hawkwind)
* [svn-r2444] Checkpoint the Generic Property implementation. It's not active ↵Quincey Koziol2000-07-251-4/+6
| | | | | | yet, but it's close. This shouldn't interfere with other development work. (I think.. :-)
* [svn-r1568] Changes since 19990730Robb Matzke1999-08-101-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- This extensive change is the virtual file layer implementation. I've ported and tested the sec2, family, and core drivers and only ported the mpio driver (Albert will test it). So if you need MPIO I would recommend sticking with the previous version for a while. You will get a few compile warnings about split and stdio drivers not being implemented and possibly tracing information not inserted in some of the drivers. You can safely ignore them but I plan to fix them. I'm still working on the split driver because I just realized that it needs a part of the VFL that isn't written yet. Documentation is being updated also because there were some minor changes (mostly just name changes). It should be available on my web site later this week. ./MANIFEST ./src/Makefile.in ./src/hdf5.h ./src/H5Flow.c [REMOVED] ./src/H5Fstdio.c [REMOVED] ./src/H5Fsec2.c [REMOVED] ./src/H5Fsplit.c [REMOVED] ./src/H5Fmpio.c [REMOVED] ./src/H5Ffamily.c [REMOVED] ./src/H5Fcore.c [REMOVED] ./src/H5MFpublic.h [REMOVED] ./src/H5FD.c [NEW] ./src/H5FDcore.c [NEW] ./src/H5FDcore.h [NEW] ./src/H5FDfamily.c [NEW] ./src/H5FDfamily.h [NEW] ./src/H5FDmpio.c [NEW] ./src/H5FDmpio.h [NEW] ./src/H5FDprivate.h [NEW] ./src/H5FDpublic.h [NEW] ./src/H5FDsec2.c [NEW] ./src/H5FDsec2.h [NEW] Removed/added files for virtual file layer. ./bin/trace ./src/H5.c Removed unused public datatypes and added new VFL public datatypes. Changed an error message. ./config/BlankForm ./config/dec-flags ./config/gnu-flags ./config/hpux10.20 ./config/hpux9.03 ./config/irix5.x ./config/irix6.x ./config/solaris2.x ./config/unicosmk Removed the H5F_OPT_SEEK and H5F_LOW_DFLT constants from the configuration since they're no longer applicable. The default file driver is always the sec2 driver and it always optimizes calls to lseek() or lseek64(). ./config/depend.in C preprocessor errors generated during automatic dependency building are sent to /dev/null to prevent them from appearing twice in the make output. ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Oshared.c ./src/H5T.c ./src/H5detect.c ./test/ohdr.c Changed H5F_ADDR_UNDEF to HADDR_UNDEF to be more consistent with the `haddr_t' datatype which is now a public type. ./src/H5D.c ./src/H5P.c ./src/H5Ppublic.h ./src/H5Tconv.c ./test/cmpd_dset.c ./test/dsets.c ./test/overhead.c ./test/tselect.c ./test/tvltypes.c The H5P_DATASET_XFER constant was changed to H5P_DATA_XFER because the properties apply to all types of I/O operations, not just datasets. ./src/H5B.c ./src/H5Bprivate.h ./src/H5D.c ./src/H5Dpublic.h ./src/H5F.c ./src/H5Farray.c ./src/H5Fistore.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5R.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Spoint.c ./src/H5Sprivate.h ./test/big.c ./test/h5test.c ./test/istore.c ./testpar/t_dset.c ./testpar/t_file.c ./tools/h5debug.c ./tools/h5ls.c Modified to work with the virtual file layer by calling H5FD_* functions instead of H5F_low_* functions and by passing file access and data transfer properties by object ID instead of pointer. Changed H5D_transfer_t to H5FD_mpio_xfer_t since the COLLECTIVE vs. INDEPENDENT transfer mode is specific to the MPIO file driver. Moved MPIO-specific stuff into the MPIO driver. ./src/H5B.c ./src/H5D.c ./src/H5Fprivate.h The H5F_mpio_* private functions were renamed and placed in the H5FDmpio driver except those which appeared in H5Smpio.c. ./src/H5E.c ./src/H5Epublic.h Added major error number H5E_VFL for virtual file layer related errors. ./src/H5F.c ./src/H5Fprivate.h Changed the logic that controls whether the boot block is written. Instead of assuming that the first call to write the boot block is only to allocate space, I've added a function argument which makes this explicit. Changed the way files are compared so that a driver-defined comparison function can be called. Files which belong to different drivers are always considered different. Removed H5F_driver_t since file drivers are now identified by object ID instead of a special non-user-extendible datatype. Removed all the hard-coded low-level file properties which have been replaced by the various file drivers. ./src/H5I.c ./src/H5Iprivate.h Added the H5I_inc_ref() which was removed a few months ago since we finally have a use for it. ./src/H5Ipublic.h Added the H5I_VFL object ID type to identify file drivers in the virtual file layer. ./src/H5MF.c ./src/H5MFprivate.h Moved all the allocation/deallocation code into the virtual file layer which allows file drivers to override much of it. ./src/H5P.c ./src/H5Ppublic.h Moved file driver-specific code into the various file driver files. The H5Pcopy() and H5Pclose() functions make calls into the virtual file driver to manage the memory for driver-specific file access and data transfer properties. ./src/H5private.h ./src/H5public.h The `haddr_t' type is now public. ./test/tfile.c Added a few more comments.
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