| Commit message (Collapse) | Author | Age | Files | Lines |
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Bring updated layout and EFL property comparisons and new "latest format"
flags from revise_chunks branch.
Tested on:
MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
(h5committest forthcoming)
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Tested on jam, ostrich, platypus, kite, quail, osx1010test, emu, mayll, moohan.
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metadata optimizations.
- rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library
tested on bb-8 with parallel and serial.
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- merge from trunk.
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Normalize against the phdf5_metadata_opt branch, in preparation for
merging it to trunk.
Tested on:
MacOSX/64 10.11.3 (amazon) w/serial, parallel, and production builds
h5committest forthcoming
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checks from metadata dxpls
- remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead.
- remove flush_me_collectively flag from cache entries
- add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit.
tested on BB-8 with serial and parallel.
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Normalize against incoming changes from the phdf5_metadata_opt branch.
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest forthcoming)
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Normalize against changes on phdf5_metadata_opt branch to trunk
Tested on:
MacoSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest forthcoming)
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- fix farray, earray, and btree test to use correct function to retrieve internal file struct.
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Revisions to normalize revise chunks vs. trunk, plus push dataset metadata
changes into the cache immediately (instead of holding them within the dataset
data structures).
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest not required on this branch)
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Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
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Bring 'fail if unknown always' object header message flag from the
avoid_truncate branch, strengthen error checking for unknown messages, and try
to catch object header code configurations at compile time (instead of runtime).
Tested on:
MacOSX/64 10.10.3 (amazon) w/serial & parallel
(h5committest forthcoming)
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Merge v3 metadata cache changes to trunk. Yay! :-)
Tested on:
MacOSX/64 10.10.3 (amazon) w/serial & parallel
Linux/32 2.6.x (jam) w/serial & parallel
(daily tested on branch)
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* H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z)))
- Rename UNUSED attribute characterstic to H5_ATTR_UNUSED.
- Rename NORETURN attribute characterstic to H5_ATTR_NORETURN
tested with h5committest.
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the arguments to be in a more logical order.
Tested on: h5committest
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- allocate sieve buffer with calloc instead of malloc
tested with h5committest
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make a higher level wrapper object around all VOL objects that
includes the VOL information.
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plugin hid_t instead
- rework the private VL layer to use the class structure directly
- some bug fixes
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symmetrical to VFDs and allow new functionality to be implemented
later.
+ some Bug fixes
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hid_t. Bug exposed in VOL branch.
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down to H5Fint.c
- move is_HDF5 inside deprecated macros in H5Fpublic.h
- move H5ES_status_t outside of H5VLpublic.h to H5ESpublic.h
- rename public properties in H5VLpublic.h to H5VL_PROP_* to add more scoping
- no need to include private if pkg is included in H5VLnative.c
- rename plist_id to lapl_id in loc_params structs
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- uncomment tests to check error output in Makefiles.
- fix bug in native implementation of H5Aiterate.
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- change hid_t req in callbacks to void **req
- change all callbacks to accept dxpl_ids (except dataset write and read which already do)
- update all the private and public VL routines to accept a dxpl_id and event queue id
- Add an async class for the VOL plugin with cancel, test, and wait request operations
- add the external VOL log plugin test to the examples directory
NOTE that async operations are still not provided by the HDF5 API, so
all event queue IDs and requests passed to all plugins are NULL for
now.
Tested on jam.
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Switch propert list/class iteration from internal to external form of
iteration, cleaning up and simplifying the code a bit.
Bring other general improvements from plist_encode_decode branch back to
trunk.
Clean up many warnings.
Tested on:
Mac OSX/64 10.7.4 (amazon) w/gcc 4.7, debug and C++ & FORTRAN
(too minor to require h5committest)
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Description:
When jumping out from between H5_BEGIN_TAG and H5_END_TAG macros using
HGOTO_ERROR or HGOTO_DONE, the previous metadata tag is not reset on the dxpl.
This could cause problems when, for example, calling H5Ocopy within an
H5Literate callback.
Added new HGOTO_ERROR_TAG and HGOTO_DONE_TAG macros which must be used in place
of the above between H5_BEGIN_TAG and H5_END_TAG.
Tested:
jam, koala, ostrich (h5committest), durandal
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ID with the VOL info on the upper level (API and iteration/visit routines)
- this fixes the bug exposed in H5Oopen with external log plugin
update the private VL registration routine to take an app_ref
update the datatype ID creation for the VOL to take an app_ref
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instead
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move ref count management on the VOL struct inside the VLint code
- H5Freopen still needs to be handled
create the public interface for VOL callbacks:
- unresolved issue with var_args
update and create new API fapl calls to support stacking drivers:
- need to add fapl copy callback
fix a memory leak with registration of external plugins
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- change how the vlose routine is registered with VOL IDs
- some bug fixes
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- still some unresolved issues with named datatypes
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the API level for the native implementation
- work on fixing the named datatype issue.. still not resolved
- branch still not stable and tests do not pass at this point
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modify datatype open and get_binary callbacks to be disjoint
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pointers and public VL structure instead of IDs.
tests will fail now because of named datatypes.
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use the loc_param struct instead.
update the native implementation
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- create a struct to hold parameters for object locations instead of calling into VOL to lookup and free object:
* update the implementation for H5Oopen(_by_name/idx/ref)
* H5Rderefence
* H5Aopen(_by_name), H5Arename(_by_name)
* other routines coming later
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update some deprecated routines to use VOL
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move them to the VOL public header.
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for objects and files
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