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Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)
Description:
Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation. So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.
I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
FreeBSD 4.10 (sleipnir) w/threadsafe
FreeBSD 4.10 (sleipnir) w/backward compatibility
Solaris 2.7 (arabica) w/"purify options"
Solaris 2.8 (sol) w/FORTRAN & C++
AIX 5.x (copper) w/parallel & FORTRAN
IRIX64 6.5 (modi4) w/FORTRAN
Linux 2.4 (heping) w/FORTRAN & C++
Misc. update:
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Code cleanup & optimization
Description:
Improve ADF/CGNS benchmark by reducing the number of internal attribute
copies made during creations, opens and writes.
Added new H5O_iterate() routine for iterating through messages of a certain
type in the object header (attributes are the only message currently that can
have multiple instances in the object header).
Cross-pollinated various minor code cleanups to reduce diffs between
branches.
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel
Solaris 2.7 (arabica)
Too minor to require h5committest
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Code cleanup
Description:
Update null dataspace changes to try to write older version of dataspace
information whenever possible.
Refactor common code to only one location.
Allow I/O operations to succeed on null dataspaces.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Description: Mainly are header message changes for dataspace. In last round
of check-in, a new header message for dataspace to created, which is not a good
way. Now, there will be no new message for dataspace, but just add the type of
dataspace in the message while increment its version number. Backward compatibility
is addressed. The attribute design is modified accordingly.
Platforms tested: h5committest
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Description: NULL dataspace. This step is mainly for dataspace header
message and a test.
Solution: The test mainly checks NULL dataspace features. Backward compatibility
is tested in the fill value test.
Platforms tested: h5committest
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Bug fixes and code cleanup
Description:
Lots of changes here:
- Fixed bug #691 - when shared datatypes are used in attributes they
are incorrectly copied into the attribute instead of referring
the the named datatype in the file. This required bumping the
version of the attribute message. The new version of the attribute
message is only written out when a shared datatype is used in
the attribute. [Also, this format change made the size of the
attribute smaller.]
- Added information to attribute debugging routine so that shared
datatypes are displayed correctly with the h5debug tool.
- Refactored the H5O* routines to extract code that was common to
several routines into subroutines to call.
- Added 'link' method for H5O message sub-classes, which increments
the link count on shared objects when a message is created which
shares them.
- Corrected [unreported] bug where the link count was not being
decremented on the shared object when a object header message
with a reference to that object was deleted from the file.
- Reduced size of shared message from 49 bytes (which was incorrect
anyway and should have been 48 bytes) to 10 bytes, which required
bumping the version of "shared" messages.
- Refactored some of the shared datatype routines to allow for easier
queries of "committedness" internally to the library and also
added routine to easily increment/decrement the reference count of
a shared datatype.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
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Code cleanup
Description:
Change some variables that are keywords in C++ to non-keywords.
Platforms tested:
FreeBSD 4.8 (sleipnir)
too minor to require full h5committest
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New feature
Description:
Track changes in the internal metadata API with clearing the metadata
dirty flag without flushing object.
Added ability to delete an object header in the file and restore all the
space referenced by various header messages.
Platforms tested:
FreeBSD 4.8 (sleipnir) w/C++
Linux 2.4 (burrwhite) w/FORTRAN
Solaris 2.7 (arabica) w/FORTRAN
IRIX64 6.5 (modi4) w/parallel & FORTRAN
(h5committest not run due to my ongoing difficulties with C++ on burrwhite).
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Cleanup
Description:
The H5O_FPHDF5 object was left in this header file by mistake when
the H5Ofphdf5 module was removed
Solution:
Removed it.
Platforms tested:
Linux
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Code cleanup
Description:
Clean up miscellaneous warnings which have crept into the code.
Fix "_POSIX_C_SOURCE not defined" warning on FreeBSD.
Adjust gcc compiler flags to be more concise for production mode.
Refactor the H5O code so that there is a stronger boundary between code
in the H5O package and code in the library which just calls H5O routines.
Platforms tested:
Tested h5committest {arabica (fortran), eirene (fortran, C++)
modi4 (parallel, fortran)}
FreeBSD 4.7 (sleipnir) serial & parallel and gcc 2.95.4 & gcc 3.2.2
Misc. update:
Update MANIFEST if you add or remove any file.
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