| Commit message (Collapse) | Author | Age | Files | Lines |
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CMake stuff is not verified.
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merge_func_enter_vol
Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
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Merge from develop.
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(2) Add two new options to h5repack for low and high bounds as in H5Pset_libver_bounds.
(3) Modify message pre_copy callbacks so that H5Ocopy can handle version bounds check.
(4) Add version bounds check for cache image feature.
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Code changes to provide versioning support when adding to the enumerated defines for H5F_libver_t.
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Changes made so that raw data for dataset objects are copied from cached info when possible instead of flushing objects to file and read them back in again.
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hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
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1) Calculate chunk index for extensive array index based on swizzled max chunks when unlim_dim > 0
2) Minor fixes to test/fheap.c that somehow were missed from last check in. See pull request #396 review comments.
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and the tool and API wrappers will be coming in over the weekend.
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Adds /*out*/ parameters to H5O_close() and H5F_try_close() so
that H5D/G_close() will know when H5O_close() has triggered a
file close and thus the file struct is not reliable.
Also removes the H5F_CLOSING() macro and related which were
formerly used to check if the file was closing.
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with revise_chunks changes, and remove unused "message locking" code.
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More warning cleaups: down to 770 warnings (from ~940) in 134 files (from
148), with 28 unique kinds of warnings (from 31).
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial & parallel
(h5committest forthcoming)
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Bring object/dataset/group/named datatype features from revise_chunks
branch to trunk. Also CMake support for h5format_convert and a bunch of
misc. cleanups.
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
(h5committest forthcoming)
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Bring H5DOappend(), H5P[s|g]et_object_flush_cb, and H5P[s|g]et_append_flush
from revise_chunks branch to trunk. Brings along updated metadata cache
entry tagging, and the internal object flush routine.
Tested on:
MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
(h5committest forthcoming)
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Bring "single" chunk index from revise_chunks branch to trunk.
Tested on:
MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd)
(h5committest forthcoming)
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Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
Autotools serial w/ Java, Fortran, & C++
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Bring support for earray and v2 B-trees from revise_chunks branch to
trunk.
Tested on:
MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
(h5committest forthcoming)
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Bring "don't filter partial edge chunks" capability from revise_chunks
to trunk.
Tested on:
MacOSX/64 10.11.4 (amazon) w/debug, production & parallel
(h5committest forthcoming)
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This is unused and causes problems for a user who has OUT #defined.
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
autotools serial
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Tested on jam, ostrich, platypus, kite, quail, osx1010test, emu, mayll, moohan.
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Normalize against the phdf5_metadata_opt branch, in preparation for
merging it to trunk.
Tested on:
MacOSX/64 10.11.3 (amazon) w/serial, parallel, and production builds
h5committest forthcoming
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Bring over rest of performance improvements for extending chunked datasets
and normalize against revise_chunks branch.
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel)
(h5committest forthcoming)
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Revisions to normalize revise chunks vs. trunk, plus push dataset metadata
changes into the cache immediately (instead of holding them within the dataset
data structures).
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest not required on this branch)
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Sync w/trunk.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest not required on this branch)
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Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
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were previously
opened when calculating the VDS extent, instead assuming they still exist.
Tested: ummon
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Tested: ummon
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Bring 'fail if unknown always' object header message flag from the
avoid_truncate branch, strengthen error checking for unknown messages, and try
to catch object header code configurations at compile time (instead of runtime).
Tested on:
MacOSX/64 10.10.3 (amazon) w/serial & parallel
(h5committest forthcoming)
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file and dataset
to open source files and datasets, instead of using the default property lists.
Modify VDS to reject attempts at parallel I/O, fix parallel compile error.
Modify VDS to not write fill value to memory buffer if the fill value is
undefined.
Other minor fixes/cleanup.
Tested: ummon
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Tested: ummon
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Merge v3 metadata cache changes to trunk. Yay! :-)
Tested on:
MacOSX/64 10.10.3 (amazon) w/serial & parallel
Linux/32 2.6.x (jam) w/serial & parallel
(daily tested on branch)
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mappings.
Other minor fixes/cleanup.
Tested: ummon
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space - the
library no longer iterates over all source datasets in the printf mapping, it
now only looks at the ones that could be involved in I/O (the ones whose bounds
overlap with the selection in the unlimited dimension).
Tested: ummon
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H5_VDS_FIRST_MISSING)
Add test for this
Rework VDS code to not depend on unlimited selections having a "clipped" state
in preparation for removing the clipped state from unlimited selections.
Other bug fixes/cleanup
Tested: Kubuntu 64 (home computer)
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Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2
(C++ and Fortran 2003 also tested)
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Normalize trunk against the metadata_cache_merge branch, in preparation
for merging the branch into the trunk.
Tested on:
MacOSX/64 10.10.3 (amazon) w/serial & parallel
Linux/64 2.6.x (koala) w/serial
Linux/32 2.6.x (jam) w/serial & parallel
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Add testing for this.
Fix bug in printf string parsing.
Add test for this.
Other minor fixes/cleanup.
Tested: ummon
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Various bug fixes, including a temporary fix for printf with FIRST_MISSING view.
Other cleanup.
Tested: ummon
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Passes use case test, no regression tests yet.
Add functions H5Pset/get_virtual_printf_gap (not tested yet).
Other minor fixes/cleanup.
Tested: ummon
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