| Commit message (Collapse) | Author | Age | Files | Lines |
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metadata optimizations.
- rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library
tested on bb-8 with parallel and serial.
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checks from metadata dxpls
- remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead.
- remove flush_me_collectively flag from cache entries
- add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit.
tested on BB-8 with serial and parallel.
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Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
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- allocate sieve buffer with calloc instead of malloc
tested with h5committest
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make a higher level wrapper object around all VOL objects that
includes the VOL information.
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plugin hid_t instead
- rework the private VL layer to use the class structure directly
- some bug fixes
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down to H5Fint.c
- move is_HDF5 inside deprecated macros in H5Fpublic.h
- move H5ES_status_t outside of H5VLpublic.h to H5ESpublic.h
- rename public properties in H5VLpublic.h to H5VL_PROP_* to add more scoping
- no need to include private if pkg is included in H5VLnative.c
- rename plist_id to lapl_id in loc_params structs
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Check in Neil's changes for correctly handling case where library is
reinitialized through a deprecated routine.
Tested on:
Linux 2.4.x/32 (jam)
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- change hid_t req in callbacks to void **req
- change all callbacks to accept dxpl_ids (except dataset write and read which already do)
- update all the private and public VL routines to accept a dxpl_id and event queue id
- Add an async class for the VOL plugin with cancel, test, and wait request operations
- add the external VOL log plugin test to the examples directory
NOTE that async operations are still not provided by the HDF5 API, so
all event queue IDs and requests passed to all plugins are NULL for
now.
Tested on jam.
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ID with the VOL info on the upper level (API and iteration/visit routines)
- this fixes the bug exposed in H5Oopen with external log plugin
update the private VL registration routine to take an app_ref
update the datatype ID creation for the VOL to take an app_ref
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- still some unresolved issues with named datatypes
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pointers and public VL structure instead of IDs.
tests will fail now because of named datatypes.
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use the loc_param struct instead.
update the native implementation
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- create a struct to hold parameters for object locations instead of calling into VOL to lookup and free object:
* update the implementation for H5Oopen(_by_name/idx/ref)
* H5Rderefence
* H5Aopen(_by_name), H5Arename(_by_name)
* other routines coming later
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plugin to pass a NULL request
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update the H5R routines to use the VOL
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- object open routines fall back to the generic VL object open in case the specific call back is not impemented
- H5L VOL create/copy/move routines
- make VOL create routines have similar interface and stuff parameters in creation plist
- some bug fixes
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Refactor function name macros and simplify the FUNC_ENTER macros, to clear
away the cruft and prepare for further cleanups.
Tested on:
Mac OSX/64 10.7.3 (amazon) w/debug, production & parallel
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list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c.
Tested on jam, heiwa, and koala.
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Bring r18356 from metadata journaling merge branch to trunk:
Converge metadata journaling branch with trunk with a bunch of v1 B-tree
changes:
- Remove H5ACprivate.h header from H5Bprivate.h header
- Revise v1 B-tree client callbacks
- Get rid of H5B_serialize() by bringing it into H5B_flush()
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
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Add forgotten ifdef's around deprecated routines.
Tested on:
FreeBSD/32 6.2 (duty) in debug mode
FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
in debug mode
Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
Mac OS X/32 10.4.10 (amazon) in debug mode
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Add H5Rget_obj_type() to the API versioning and switch internal
routines to use H5Rget_obj_type2()
Misc. other code cleanups, etc.
Tested on:
FreeBSD/32 6.2 (duty)
FreeBSD/64 6.2 (liberty)
Linux/32 2.6 (kagiso)
Linux/64 2.6 (smirom)
AIX/32 5.3 (copper)
Solaris/32 2.10 (linew)
Mac OS X/32 10.4.10 (amazon)
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