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* [svn-r936] Changes since 19981119Robb Matzke1998-11-211-92/+96
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gstab.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5Iprivate.h ./src/H5MF.c ./src/H5MM.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Smpio.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5detect.c ./src/H5private.h Most of these changes are because the `interface_initialize_g' variable change from hbool_t to int. It's a one line change. Changed the way the library is closed so we have more control over the order the interfaces are shut down. Instead of registering an atexit() function for every interface in some haphazard order we just register one: H5_term_library() which then calls the H5*_term_interface() functions in a well-defined order. If the library is closed and then reopened repeatedly by calling H5close() and H5open() in a loop we only add one copy of the library termination functions with atexit(). Termination is a two-step process in order to help detect programming errors that would cause an infinite loop caused by the termination of one interface waking up some other previously terminated interface. The first step terminates the interface and *marks it as unusable*. After all interfaces are terminated then we mark them all as usable again. The FUNC_ENTER() macro has been modified to return failure or to dump core (depending on whether NDEBUG is defined) if we try to call an interface while it's shutting down. ./src/H5.c The H5dont_atexit() function returns failure if it's called more than once or if it's called too late. However, the error stack is not automatically printed on failure because the library might not be initialized yet ./test/chunk.c ./test/flush1.c ./test/flush2.c ./test/iopipe.c ./test/overhead.c ./test/ragged.c Changed the extra cast for Win32 so we do floating point division again -- it was just confusion about precedence and associativity of casting and the C coercion rules. Removed extra carriage returns inserted by broken operating system. ./src/H5Ffamily.c Fixed an bug where H5F_fam_write() lowered the EOF marker for one of the family members causing H5F_fam_read() to read zeros. ./test/h5test.h [NEW] ./test/h5test.c [NEW] ./test/Makefile.in ./test/bittests.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/extend.c ./test/external.c Support library for test files. This isn't done yet but Katie's contractions are ~10 minutes apart so I figured I better back this stuff up just in case I'm not here next week... Eventually all test files will understand HDF5_DRIVER to name the low level file driver and parameters so we can easily test various drivers. They will also understand HDF5_PREFIX to prepend to the beginning of file names which is necessary for testing ROMIO with various drivers. Also, the cleanup function will know how to use the file name prefix and will understand different file driver naming schemes like file families. I'm not sure they'll understand the `gsf:' type prefixes yet. Note, the external test is completely commented out because I'm in the middle of modifying it. It will still compile and run but it doesn't test anything at the moment.
* [svn-r925] Changes since 19981116Robb Matzke1998-11-181-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./INSTALL.parallel [NEW] We're beginning to unify some of the parallel installation steps. This file will contain general information for installing the parallel library. It's not complete yet. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] Check for xdr_int() in libnsl required on Solaris when linking with hdf4. It's found on the Irix system I tested which complains that `-lnsl' didn't resolve any symbols. Oh well. Fixed the order of searching for libdf and libmfhdf for hdf4 linking. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5Z.c Check for compress() in libz in order to find older versions of the library that will still work for hdf4. Added a separate check for compress2() that hdf5 will use. ./configure.in ./configure [REGENERATED] ./src/H5config.h.in [REGENERATED] ./src/H5.c ./src/H5private.h ./src/H5A.c ./src/H5B.c ./src/H5Bprivate.h ./src/H5D.c ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5HG.c ./src/H5HL.c ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Ofill.c ./src/H5Olayout.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5R.c ./src/H5RA.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Snone.c ./src/H5Spoint.c ./src/H5Sprivate.h ./src/H5Sselect.c ./src/H5T.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5V.c ./test/bittests.c ./test/gheap.c ./test/hyperslab.c ./test/istore.c ./test/tmeta.c ./test/trefer.c ./test/tselect.c ./tools/h5debug.c ./tools/h5tols.c Added checks for Posix.1g types like `int8_t'. If not defined then H5private.h defines them. Changed all `int8' etc. to `int8_t'. ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5I.c ./src/H5P.c ./src/H5R.c ./src/H5RA.c ./src/H5S.c ./src/H5T.c ./src/H5TB.c ./src/H5Z.c Calling H5*_term_interface() resets interface_initialize_g to FALSE so a subsequent call to H5open() (implied or explicit) reinitializes global variables properly. ./src/H5private.h ./src/H5Oefl.c ./src/H5S.c Changed MAX_SIZET, MAX_SSIZET, MAX_HSIZET, and MAX_HSSIZET to SIZET_MAX, SSIZET_MAX, HSIZET_MAX, and HSSIZE_MAX to they match the Posix.1 constants in <limits.h>. ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5detect.c Added 36 more integer hardware conversion functions to the type conversion table for conversions to/from `long long' and `unsigned long long'. The `long long' names will be changed shortly to make them portable to Win32. Changed H5T_init() to H5T_native_open() and added an H5T_native_close() to open and close the predefined native data types. Increased the initial size of the type conversion table from 64 to 128 entries. Reordered the 90 new integer conversion functions so the names that are printed favor `int' over `short' or `long' when two of them are the same. ./test/dtypes.c Added hardware and software integer conversion tests for the 56 functions I added recently but not the additional 36 checked in this time. That will come next. Call H5close() after each test so type conversion statistics are easier to follow. Try this: $ HDF5_DEBUG=t ./dtypes Added more debugging output for when things go wrong. ./src/H5private.h Removed trailing carriage-returns inserted by broken operating system ;-)
* [svn-r800] Made a "htri_t" as a return value from "boolean" functions returningQuincey Koziol1998-10-261-6/+6
| | | | TRUE/FALSE/FAIL, hbool_t is now strictly for true boolean values.
* [svn-r797] Changed comments from returning "SUCCEED/FAIL" to ↵Quincey Koziol1998-10-261-40/+24
| | | | | | "non-negative/negative" and also fixed a few more explicit checks against FAIL.
* [svn-r795] Changes since 19981026Robb Matzke1998-10-261-16/+22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./test/th5s.h5 [NEW] ./test/th5s.c Added a test to make sure that creating a data space with too large a rank fails. Added a test to make sure that reading a file that has a dataset with a space with too large a rank fails. Actually, this one is a little weird: the code that reads the data space message assumes the space is scalar if the message cannot be read. Fortunately the layout message fails also, preventing the dataset from being opened. However, since the data type message is still visible h5ls will report that the object is a named data type. ./test/space_overflow.c [NEW] This is the little program that makes the th5s.h5 file. ./src/H5A.c ./src/H5R.c ./src/H5Sselect.c Updated trace info. ./src/H5Olayout.c ./src/H5Osdspace.c Added code to fail if the dimensionality is too large when decoding a layout or simple data space message. ./src/H5Oprivate.h Redefined H5O_LAYOUT_NDIMS in terms of H5S_MAX_RANK. ./src/H5P.c ./src/H5S.c Check for ndims>H5S_MAX_RANK in API function calls, added assert to internal functions. ./src/H5V.c Changed a `<' to an `<=' in an assert. ./test/flush2.c Includes stdlib.h for getenv(). ./tools/h5tools.c Able to handle up to H5S_MAX_RANK dimensions during output.
* [svn-r789] Changes since 19981023Robb Matzke1998-10-261-4/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./test/Makefile.in ./test/flush1.c [NEW] ./test/flush2.c [NEW] Test to see if calling H5Fflush() results in a consistent file. ./src/H5.c ./src/H5A.c ./src/H5D.c ./src/H5Fistore.c ./src/H5I.c ./src/H5S.c ./src/H5Shyper.c ./src/H5Sselect.c ./src/H5TB.c Changed comparisons against SUCCEED and FAIL to >=0 and <0 in about 15 places. ./src/H5.c ./src/H5V.c ./src/H5detect.c ./src/H5private.h ./src/H5public.h ./test/big.c ./test/chunk.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/external.c ./test/fillval.c ./test/iopipe.c ./test/links.c ./test/mount.c ./test/mtime.c ./test/ragged.c ./test/shtype.c ./test/unlink.c Removed ^M from the end of lines inserted on broken OS's ;-) ./src/H5private.h Changed c++ comments to c comments. ./src/H5R.c Added tracing macros.
* [svn-r770] H5B.c:Albert Cheng1998-10-211-2/+2
| | | | | | | | | | | | | | | | | | Replaced FAIL with H5B_INS_ERROR in routine H5B_remove_helper. Updated code that calls H5B_remove_helper with the proper code. H5Fmpio.c: Removed a typo. H5Gnode.c: Replaced FAIL with H5B_INS_ERROR in routine H5G_node_remove. H5Odtype.c: Put in proper casting to remove compiler warnings. H5S.c: Replaced FAIL with H5S_NO_CLASS in routine H5Sget_simple_extent_type. H5Sselect.c: Fixed couple typos to remove compiler warnings. Platform tested: O2K.
* [svn-r737] Changed H5I groups to have a H5I_ prefix before them, to better ↵Quincey Koziol1998-10-051-15/+15
| | | | | | align with the library.
* [svn-r673] Changes since 19980908Robb Matzke1998-09-081-3/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./COPYING Reformatted as text instead of C. Removed zlib crew from the list of contributors since no zlib code is actually in the hdf5 library. ./INSTALL ./INSTALL.ascired ./MANIFEST Minor updates for Beta release including version number change. ./INSTALL_MAINT Added information about making a release. ./RELEASE Updated function list based on public header files. ./bin/checkposix Got rid of complaints about some obvious things. ./doc/html/H5.api.html ./doc/html/RM_H5F.html ./src/H5F.c ./src/H5Fpublic.h ./test/tfile.c Changed H5Fget_create_template() and H5Fget_access_template() to H5Fget_create_plist() and H5Fget_access_plist() since that conforms better to lots of other names. ./doc/html/Datatypes.html ./doc/html/ExternalFiles.html ./doc/html/Files.html ./doc/html/H5.api.html ./doc/html/H5.sample_code.html ./doc/html/RM_H5F.html ./doc/html/RM_H5Front.html Changed `template' to `property list', etc. ./doc/html/Ragged.html [NEW] Documentation for ragged arrays. ./src/H5Iprivate.h ./src/H5Ipublic.h ./src/H5I.c Changed the scope of some symbols to be more local. ./src/H5.c ./src/H5AC.c ./src/H5D.c ./src/H5E.c ./src/H5F.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5I.c ./src/H5O.c ./src/H5Ocomp.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Omtime.c ./src/H5Oname.c ./src/H5P.c ./src/H5S.c ./src/H5Shyper.c ./src/H5Tbit.c ./src/H5Tconv.c ./src/H5V.c ./src/H5Z.c ./src/H5private.h Fixed some violations of our naming scheme by adding HD to the beginning of all Posix functions.
* [svn-r654] Fixed last bug (hah! ;-) for beta release, changed H5Gget_stat to ↵Quincey Koziol1998-09-021-13/+13
| | | | | | H5Gget_objinfo and renamed internal functions to match up with the renamed API functions.
* [svn-r641] Changed function names for beta release.Quincey Koziol1998-09-011-13/+13
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* [svn-r633] Changes since 19980828Robb Matzke1998-08-311-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./RELEASE Updated with important changes I made since the second beta. ./src/H5A.c ./src/H5D.c ./src/H5Dprivate.h ./src/H5G.c ./src/H5Gprivate.h ./src/H5R.c ./src/H5Rprivate.h ./src/H5T.c ./src/H5Tprivate.h Any API function that used to take an `hid_t loc_id' followed by a `const char *name' can now take any type of object for the loc_id as long as the object is somehow associated with a file. Internally, H5G_loc() was modified to return an H5G_entry_t* instead of an H5G_t* so it's more general. Among other things, this allows one to retrieve information about an object like a named type or dataset without knowing the name of the type or dataset: int get_nlinks (hid_t obj) { H5G_stat_t sb; if (H5Gstat(obj, ".", TRUE, &sb)<0) return -1; return sb.nlink; } ./test/gheap.c ./test/istore.c These files needed a couple of changes because they call some of the internal functions whose H5G_t arguments changed to H5G_entry_t. ./src/H5A.c Got rid of all the switch statements for getting symbol table entries for varous objects and replaced them with a call to H5G_loc() allowing attributes to automatically apply to any type of object that belongs to a file. ./test/Makefile.in Moved the ragged array tests from the normal list of tests to the `make timings' target. ./test/ragged.c Added rewrite tests -- rewrite the rows of a dataset changing the number of rows and the length of each row. ./test/mtime.c Added a test that checks that H5Gstat() can be called with a dataset as the first argument. ./src/H5S.c Added #ifdef HAVE_PARALLEL around code to check for the HDF5_MPI_OPT_TYPES environment variable because the global variable that gets set is #ifdef'd. ./bin/release bzip2 uses .bz2 as the file extension.
* [svn-r629] Put ifdef HAVE_PARALLEL around init of H5_mpi_opt_types_g.Robert Kim Yates1998-08-281-0/+2
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* [svn-r628] MPI buffer and file type optimization is bypassed,Robert Kim Yates1998-08-281-0/+14
| | | | unless the environment variable HDF5_MPI_OPT_TYPES is nonzero.
* [svn-r620] Changes since 19980825Robb Matzke1998-08-271-13/+13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./src/H5R.c [NEW] ./src/H5Rprivate.h [NEW] ./src/H5Rpublic.h [NEW] ./src/Makefile.in ./src/hdf5.h ./test/ragged.c [NEW] Preliminary support for 2d ragged arrays for Mark Miller and Jim Reus. Not fully implemented yet. The test is not actually part of `make test' because we still have some memory problems. ./src/H5E.c ./src/H5Epublic.h Added H5E_RAGGED as a major error number. ./bin/release Checks the MANIFEST file against `svf ls' on systems that have it. ./bin/trace Fixed a bug that caused arguments of type `void *x[]' to not be handled. ./src/H5.c Removed unused variables and changed a couple types to fix compiler warnings. Added tracing support for ragged array object ID's and arrays of pointers. ./src/H5D.c H5Dcreate() will complain if either of the property lists are invalid (instead of using the default). ./src/H5D.c ./src/H5Dprivate.h Split H5Dget_space() into an API and internal function so it can be called from the new ragged array layer. ./src/H5Fistore.c Fixed warnings about unsigned vs. signed comparisons. ./src/H5Flow.c Fixed a warning about a variable being shadowed in the MPI-IO stuff. ./src/H5Iprivate.h ./src/H5Ipublic.h Added the H5_RAGGED atom group. ./src/H5Shyper.c Fixed some freeing-free-memory errors that resulted when certain arrays were freed but the pointers were left in the data structures. I simply set the pointers to null after they were freed. ./src/H5Sprivate.h ./src/H5Sselect.c Split the H5Sselect_hyperslab() function into an API and a private function so it could be called from the ragged array layer. Added H5S_SEL_ERROR and H5S_SEL_N to the switch statements to get rid or compiler warnings. ./src/H5Tconv.c Removed a misleading comment. ./test/bittests.c Fixed a warning about a printf(). ./test/cmpd_dset.c Fixed warnings about unused variables because of test #11 being commented out. ./bin/trace Shortened the right margin for the output to allow room for the `);' at the end of the TRACE() macros.
* [svn-r606] Debugging can be enabled/disabled at runtime though code is stillRobb Matzke1998-08-191-67/+71
| | | | | conditionally included at compile time. Tracing and debugging share the same environment variable. All is documented in Debugging.html.
* [svn-r601] Changes since 19980814Robb Matzke1998-08-181-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5Fistore.c Fixed a bug that caused the wrong number of chunk offsets to be read or written from the file. ./src/H5Z.c Fixed a memory bug. ./test/dtypes.c Removed redundant tests. ./bin/snapshot Removed Perl code from a shell script. Oops :-) ./src/H5D.c Removed cvs merge conflicts. ./src/H5Omtime.c Fixed a typo in the Irix5.3 code. ./src/H5S.c Fixed a memory leak. ./src/H5Shyper.c Fixed a bad call to malloc() that didn't allocate enough memory. Reordered a comparison to eliminate an array bounds read error.
* [svn-r588] Changes since 19980810Robb Matzke1998-08-131-118/+216
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./src/H5Ssimp.c [REMOVED] ./src/Makefile.in Removed H5Ssimp.c since it was no longer used. ./bin/snapshot Fixed a few minor things to make it work better. ./src/H5D.c Cleaned up H5D_read() and H5D_write() by combining some code in each. Added timing calls around the data space calls when H5S_DEBUG is defined. ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Spoint.c ./src/H5Sprivate.h Changed H5S_find() so it returns a table entry again instead of copying the data into a caller-supplied buffer. This allows the timers to be stored in the table and updated by the caller. Added H5S_register() to register new table entries and added entry creation to all the H5S selection methods. Also changed lots of global functions to static functions. ./src/H5Fistore.c Fixed a memory bug in the raw data cache.
* [svn-r578] Changes since 19980805Robb Matzke1998-08-061-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST Replaced Compression.html with Filters.html ./doc/html/Filters.html ./src/H5Ocomp.c ./src/H5P.c ./src/H5Ppublic.h ./src/H5Z.c ./src/H5Zprivate.h Added two extra arguments to H5Pget_filter() in order to retrieve the filter name. The name is the name registered for the filter with H5Zregister(), but if the dataset creation property originally came from an existing file then the name is that which is stored in the file. ./tools/h5ls.c The `-v' option now prints the names of the filters. ./src/H5B.c ./src/H5Fistore.c ./src/H5O.c ./src/H5Oefl.c ./src/H5Oprivate.h ./src/H5P.c Plugged a memory leak. ./src/H5MMprivate.h H5MM_malloc(0) and H5MM_calloc(0) actually allocate a single byte in order to be sure that we get a valid pointer. ./src/H5S.c ./src/H5Sselect.c Fixed pointer->integer conversions in error return values in three places.
* [svn-r566] Fixed offset code [finally :-/ ] for selections.Quincey Koziol1998-08-041-3/+65
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* [svn-r539] Added H5Sselect_all codeQuincey Koziol1998-07-231-1/+1
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* [svn-r538] Added H5Sset_extent_none and H5Sextent_copy functions. They are ↵Quincey Koziol1998-07-231-10/+113
| | | | | | wrappers around features already tested.
* [svn-r537] Changes since 19980722Robb Matzke1998-07-231-2/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5A.c ./src/H5Apublic.h ./test/tattr.c Switched the order of the second and third argument of H5Aget_name() to make it consistent with other functions that take buffers and buffer sizes. ./src/H5G.c ./src/H5Gpublic.h ./src/H5Gprivate.h The H5Gget_comment() function returns the size of the comment including the null terminator. If the object has no comment then zero is returned. If an error occurs then a negative value is returned. ./MANIFEST ./tools/Makefile.in ./tools/h5tools.h [NEW] ./tools/h5dump.c [NEW] Created a library for printing values of datasets in a way that looks nice. It's not done yet, but I needed it for debugging the contents of files from Jim Reus. ./tools/h5ls.c Added the `-d' and `--dump' options which cause the contents of a dataset to be printed. Added `-w N' and `--width=N' options to control how wide the raw data output should be. If you want single-column output then say `-w1'. Printing dataset values can now handle datasets of any integer or floating point atomic type. As a special case, integers which are one byte wide are treated a character strings for now. Sample output: $ h5ls --dump --width=60 banana.hdf ARCHIVE 0:0:0:744 Dataset {52/Inf} Data: (0) "U struct complex { double R; double I; };\012V" (43) " double;\012" U 0:0:0:2500 Dataset {256/512} Data: printing of compound data types is not implemented yet V 0:0:0:3928 Dataset {256/512} Data: (0) 0, 0.015625, 0.03125, 0.046875, 0.0625, (5) 0.078125, 0.09375, 0.109375, 0.125, 0.140625, (10) 0.15625, 0.171875, 0.1875, 0.203125, 0.21875, (15) 0.234375, 0.25, 0.265625, 0.28125, 0.296875, ...
* [svn-r532] Added code for H5Sextent_class (renamed H5Sget_class)Quincey Koziol1998-07-231-1/+39
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* [svn-r529] Changes since 19980722Robb Matzke1998-07-221-23/+28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5.c Handle hid_t of type H5_TEMPBUF, arguments usually called tbuf_id. Added array tracing where the array rank is stored in a simple data space. Just use the name of the data space argument when declaring the array argument: herr_t H5Sselect_hyperslab (hid_t space_id, H5S_seloper_t op, const hssize_t start[/*space_id*/], const hsize_t _stride[/*space_id*/], const hsize_t count[/*space_id*/], const hsize_t _block[/*space_id*/]) and when the program runs you'll see array values printed: H5Sselect_hyperslab(space=218103813, op=H5S_SELECT_SET, start=0xbfffef4c {0}, _stride=NULL, count=0xbfffef44 {64}, _block=NULL) = SUCCEED; Added more symbolic data types to the tracing output. ./src/H5A.c ./src/H5Apublic.h ./src/H5D.c ./src/H5Dpublic.h ./src/H5F.c ./src/H5Fpublic.h ./src/H5G.c ./src/H5Gpublic.h ./src/H5P.c ./src/H5Ppublic.h ./src/H5S.c ./src/H5Sall.c ./src/H5Shyper.c ./src/H5Spoint.c ./src/H5Spublic.h ./src/H5Sselect.c ./src/H5Ssimp.c ./src/H5TB.c ./src/H5V.c Changed some API argument names to be more consistent with other API functions and to produce better tracing output. Reformatted some long lines. Indented printf statements. ./tools/h5ls.c Fixed warnings about unsigned vs. signed comparisons.
* [svn-r526] Changes since 19980721Robb Matzke1998-07-221-6/+7
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./tools/h5ls.c If the dataset is of type H5T_NATIVE_CHAR then we print the value as a string. This is temporary -- I plan to add better control of this later but needed something now for debugging. ./src/H5Fistore.c Squashed a bug in the chunk caching code that caused the wrong chunk to be returned. ./bin/trace ./src/H5.c Added support for printing values of array arguments when the size of the array is supplied by some previous argument. You must declare the argument as an array in order for the automatic tracing stuff to work. For instance, the third argument of H5Pset_chunk() is an array whose size is determined by the second argument `ndims'. Here's how you should declare it: herr_t H5Pset_chunk(hid_t plist_id, intn rank, hsize_t dims[/*rank*/]) The comment inside the `[]' is the name of some previous integer argument (int, unsigned, size_t, ssize_t, hsize_t, hssize_t). The trace output will look something like: H5Pset_chunk(plist=1234567, rank=2, dims=0x112233 {11, 22}) Changed tracing so that data types are printed out symbolically when possible. Changed tracing so data type initializations are not printed. This used to be confusing because lots of H5Tcopy() and H5Tregister...() calls showed up before the applications first explicit API call. ./src/H5Ipublic.h Changed the file atom group from zero to one so printing of atoms during tracing is more consistent -- they're all big numbers now. ./src/H5A.c ./src/H5E.c ./src/H5F.c ./src/H5G.c ./src/H5Sselect.c ./src/H5T.c ./src/H5TB.c ./src/H5Z.c Accidently modified these when working on the tracing, but nothing should have changed. ./src/H5P.c Changed the definition of H5Pset_chunk() for tracing. ./src/H5S.c ./src/H5Spublic.h Changed the definitions of H5Sset_extent_simple() and H5Screate_simple() for tracing. Changed the FUNC_ENTER() name for H5Screate_simple() so tracing shows the correct name.
* [svn-r523] Changes since 19980720Robb Matzke1998-07-211-0/+46
| | | | | | | | | | | | | | | ---------------------- ./test/dtypes.c We try to detect whether floating point overflow generates a SIGFPE and if it does we don't test overflow cases. ./test/H5Sprivate.h ./test/H5S.c ./test/H5Oattr.c Added an H5S_debug() which is called from H5O_attr_debug() and which has a switch statement to handle the various data type messages.
* [svn-r490] Changed more API functions to the new names as documented.Quincey Koziol1998-07-141-15/+24
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* [svn-r480] Fixed an ugly bug by teaching the recursive hyperslab I/O code ↵Quincey Koziol1998-07-101-9/+0
| | | | | | | how to resume when a buffer gets full. Also removed the check for disallowing zero-dim extents on unlimited dimension datasets, per user's request.
* [svn-r473] Changes since 19980708Robb Matzke1998-07-081-21/+68
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5Fistore.c ./src/H5S.c Fixed places where `herr_t' functions returned NULL for failure: H5F_istore_get_addr() and printf(?!?) (probably because a printf() was in the first column :-/ so I don't know what function it really was that I fixed), and H5S_extent_copy(). ./src/H5Fprivate.h Added declarations for H5F_istore_get_addr() and H5F_istore_allocate(). ./src/H5S.c ./src/H5Sprivate.h Split H5Sset_extent_simple() into H5S_set_extent_simple() and replaced calls to the API function with calls to the internal function. Changed calls to H5Screate() to H5S_create() and H5Sclose() to H5S_close(). ./src/H5Shyper.c ./src/H5Spoint.c Removed unused labels and variable. ./src/H5T.c ./src/H5Tconv.c Changed calls to H5Tfind() to H5T_find(). ./src/H5TB.c Split function return type onto a separate line for five functions and added API tracing calls.
* [svn-r469] Changes since 19980707Robb Matzke1998-07-081-1/+2
| | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./bin/trace ./src/H5.c Added tracing support for H5S_seloper_t and H5S_class_t. ./src/H5Sselect.c ./src/H5S.c Added tracing statements that weren't inserted previously because of formatting problems. ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5Tpublic.h ./test/cmpd_dset.c Added H5Tinsert_array() for inserting an array member into a compound data type. Added support to the struct conversion function for member arrays. The index permutation is not supported yet in the conversion (source and destination must have the same permutations).
* [svn-r468] Fixed formatting problems and moved H5S_sel_iter_release calls ↵Quincey Koziol1998-07-081-6/+12
| | | | | | above dataspace release calls in H5D_read and H5D_write.
* [svn-r463] H5S.c:Albert Cheng1998-07-071-35/+36
| | | | | | | | | | | Moved the source of H5S_extent_npoints before H5Sextent_npoints to reduce a compiler complaint. H5Shyper.c: H5Sprivate.h: H5Spublic.h: H5Sselect.c: Changed the parameter declarations of H5S_hyper_add and H5Sselect_hyperslab as originally intended as const hsize *.
* [svn-r460] Changes since 19980707Robb Matzke1998-07-071-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./bin/trace ./src/H5.c ./src/H5private.h ./src/H5A.c ./src/H5D.c ./src/H5F.c ./src/H5G.c ./src/H5P.c ./src/H5Pprivate.h ./src/H5S.c ./src/H5T.c Output-only arguments have their addresses printed during tracing and added symbolic output for the H5F_driver_t arguments. That's another reason that we should be careful to add `/*out*/' after arguments that are output-only and `/*in,out*/' after arguments that are used for both input and output values. No internal function calls H5Pget_class() anymore. ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tpublic.h Added H5Tget_overflow() and H5Tset_overflow() so the application can query or set a function that will be called whenever an overflow occurs. Implemented as documented in previous e-mail except the overflow handler gets two buffers: one that contains the source value and one to receive the optional destination value. ./test/dtypes.c Tests overflow handler. ./src/H5.c We have to declare fdopen() because I'm getting errors when compiling on Irix64 even though we include <stdio.h> as documented in the fdopen() man page.
* [svn-r458] Changed H5Sget_npoints call to H5Sextent_npoints and ↵Quincey Koziol1998-07-071-12/+13
| | | | H5Sselect_npoints calls.
* [svn-r454] Changes since 19980702Robb Matzke1998-07-061-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5T.c Prints statistics for no-op conversions also. For now, hardware floating point conversions may or may not raise SIGFPE depending on the hardware, operating system, etc. Software conversions never raise SIGFPE and use +Inf or -Inf for overflow. ./test/dtypes.c Catches SIGFPE and causes the test to be skipped. Better test for NaN. ./config/irix5.3 Removed the -U_POSIX_SOURCE because it was removed from the main makefiles. ./bin/trace ./src/H5S.c Fixed a typo that prevented tracing info from being added to new API functions.
* [svn-r451] Completely tore out existing dataspace API and replaced with code ↵Quincey Koziol1998-07-061-702/+624
| | | | | | | | to match API defined in the html/Dataspaces.html document. This code does not include support for strides, merging selections, or permutations of coordinates yet, but it's a drop-in replacement for the existing API with the same features.
* [svn-r435] ./INSTALLRobb Matzke1998-06-231-17/+57
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ./INSTALL_MAINT ./README ./RELEASE Partially updated for second alpha, but haven't updated version numbers yet. ./src/H5.c ./src/H5A.c ./src/H5AC.c ./src/H5B.c ./src/H5D.c ./src/H5F.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Fmpio.c ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5I.c ./src/H5MM.c ./src/H5MMprivate.h ./src/H5O.c ./src/H5Oattr.c ./src/H5Ocomp.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Olayout.c ./src/H5Oname.c ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5S.c ./src/H5T.c ./src/H5Tconv.c ./src/H5detect.c ./test/hyperslab.c ./test/istore.c Changed memory allocation functions so they fail instead of dumping core. The `x' was removed from the name to remind us of that: H5MM_xmalloc() -> H5MM_malloc(), etc. H5MM_calloc() takes one argument like H5MM_malloc() instead of two like calloc() because we almost always called it with `1' for one of the arguments anyway. The only difference between the two functions is that H5MM_calloc() returns memory which is initialized to zero. ./src/H5Gent.c ./src/H5Gprivate.h Removed H5G_ent_calloc() since it wasn't used. ./src/H5Fistore.c Fixed a bug found by Albert. Thanks, Albert! This fix combined with the changes to memory allocation prevent the library from failing an assertion if the application uses an unreasonable size for chunks (like Alberts 10000x10000x4). ./src/H5MF.c ./src/H5MFprivate.h Changed H5MF_free() to H5MF_xfree() since calling it with an undefined address is allowed.
* [svn-r432] Changes since 19980617Robb Matzke1998-06-181-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./html/Datatypes.html ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tpublic.h ./src/H5detect.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/external.c ./test/tattr.c ./test/th5s.c Organized the predefined data types. ./html/H5.intro.html NO MODIFICATIONS! This file is a mess (obviously generated from something else) so I skipped updating it! ./src/h5ls.c ./test/dsets.c ./test/tattr.c ./test/th5s.c Added extra argument to H5Sget_dims() calls per Albert's last update.
* [svn-r431] H5Sget_dims:Albert Cheng1998-06-181-7/+8
| | | | | | Added maxdims agrument to H5Sget_dims. Also removed the check of dims since H5Sget_dims can still return ndims even if both *dims and *maxdims are NULLs.
* [svn-r429] Changes since 19980616Robb Matzke1998-06-171-9/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./html/tracing.html NEW This entire update is to make it possible for the library to print the name, arguments, and return value of every API call without requiring any extra work from developers or app programmers. This file describes how this all works. ./configure.in Added the `--enable-tracing' switch. If you use it then the library will include code to print API function names, argument names and values, and function return values. However, you must then turn on the tracing by setting the HDF5_TRACE environment variable to a file descriptor number. The default is `--disable-tracing' since enabling it causes a slight increase in library size and a slowdown resulting from an extra function call for each API function call (I couldn't even measure the slowdown :-) ./bin/trace NEW A perl script that synchronizes the H5TRACE() macro calls in the *.c files with the function return type and formal argument names and types. If you use GNU make and gcc then this will be done automatically, otherwise just invoke this script with the names of one or more .c files. You could do it by hand to, but encoding argument types is a little tricky at first. ./config/commence.in Added the $(TRACE) macro, which defaults to the no-op. Added -D_POSIX_SOURCE to the compiler command line. ./src/Makefile.in Override the default for $(TRACE). ./config/depend.in Automatically calls $(TRACE) to synchronize the H5TRACE() macros in any source file that changed. As with makefile dependencies, one way to force synchronization of all files is to remove the `.depend' file. ./MANIFEST Added new files. ./src/H5Eprivate.h Modified HRETURN_ERROR() and HRETURN() for tracing. ./src/H5.c ./src/H5private.h This is where the real tracing work really happens, in H5_trace(). ./src/H5A.c ./src/H5D.c ./src/H5G.c ./src/H5P.c ./src/H5S.c ./src/H5Z.c Added H5TRACE() calls to all API functions. You don't really need these changes if you don't want to merge your stuff because they can be generated automatically by going to the hdf5/src directory and saying ../bin/trace *.c ./src/H5T.c Added H5TRACE() calls. Other stuff below. ./src/H5E.c ./src/H5Epublic.h Added H5TRACE() calls. Created a type H5E_auto_t for the `func' argument of H5Eset_auto() and H5Eget_auto() to make those arguments easier to parse for tracing. It should also make it clearer for users that don't know how to read complicated ANSI data types. ./src/H5F.c Added H5TRACE() calls. Changed a couple `uintn' argument types in API functions to `unsigned int' since `uintn' part of the API. Changed a few "can't" and "cant" error messages to "unable to". ./src/H5Ipublic.h Removed H5_DIRECTORY from the H5I_group_t enum. It wasn't used anywhere. ./src/H5Tconv.c Removed an unused label. ./src/H5Fistore.c ./src/H5Oattr.c ./src/H5Odtype.c ./src/H5T.c ./test/dsets.c ./test/dtypes.c Fixed a warning about a variable possibly used before it's initialized. Added __unused__ to turn off some unused argument warnings that pop up when debugging is turned off and optimizations are turned on.
* [svn-r418] ./html/Files.htmlRobb Matzke1998-06-101-3/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ./src/H5F.c ./src/HFcore.c ./src/H5Ffamily.c ./src/H5Flow.c ./src/H5Fmpio.c ./src/H5Fprivate.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5MF.c ./src/H5P.c ./src/H5Ppublic.h Added H5Pset_alignment() so that it is now possible to align file allocation requests on application-specified boundaries. Any request >= the specified threshold will begin on an address which is a multiple of the specified alignment. Defaults are one for threshold and alignment. The alignment is done on relative addresses, so the size of the user block can affect the location of the data in the file. ./src/H5D.c ./src/dsets.c Added a test for, and fixed the data space caching bug in datasets. Extending a dataset through one handle will cause all other handles to the same dataset to get the new dataset size. ./src/H5S.c ./src/H5Sprivate.h Removed an unused argument from H5S_read() which duplicated information from the other argument. ./config/linux Made `--enable-parallel' the default on my system. It used to be that way before but then I accidently turned it off and forgot about it. ./src/H5Fmpio.c Qualified some function arguments with __unused__. Changed a couple places where NULL was returned on error for herr_t functions. ./src/H5P.c Removed unused autos from H5Pset_mpi().
* [svn-r381] Added "rank=0" for a scalar variable initialization.Quincey Koziol1998-04-291-0/+1
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* [svn-r379] Fleshed out code for scalar dataspace support.Quincey Koziol1998-04-281-32/+23
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* [svn-r361] Added Attribute (H5A) code.Quincey Koziol1998-04-231-3/+32
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* [svn-r338] Changes since 19980407Robb Matzke1998-04-081-43/+49
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5B.c ./src/H5D.c ./src/H5Dprivate.h ./src/H5Dpublic.h ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5MF.c ./src/H5MFprivate.h ./src/H5O.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Olayout.c ./src/H5Oname.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5Ppublic.h ./src/H5S.c ./src/H5Sprivate.h ./src/H5Spublic.h ./src/H5Ssimp.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5V.c ./src/H5Vprivate.h ./src/H5private.h ./src/H5public.h ./src/h5ls.c ./test/cmpd_dset.c ./test/dsets.c ./test/extend.c ./test/external.c ./test/hyperslab.c ./test/iopipe.c ./test/istore.c ./test/shtype.c ./test/tfile.c ./test/th5s.c Anything having to do with the size of a dataset now uses the types `hsize_t' and `hssize_t' which must be the same size and at least as large as `size_t'. This isn't fully tested yet, so hsize_t and hssize_t are defined as size_t and ssize_t in H5public.h. Setting them to larger values will trip up gcc versions less than 2.8.1 on x86 platforms. Documented unused function formals with `__unused__' before the formal name. This also has the effect of supressing warning messages for gcc since it's defined to be `__attribute__((unused))' in the H5private.h file. ./src/debug.c ./src/h5ls.c If the file name contains a `%' then the file is opened as a file family with H5P_DEFAULT for the file member access property list. ./src/h5ls.c The group name is optional, defaulting to `/'. ./src/hdf5.h Added some missing public header files.
* [svn-r337] Changes since 19980403Robb Matzke1998-04-071-4/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./configure.in Moved setting of compiler warning switches earlier in the file. Turned on more warning switches to gcc. ./config/linux Prints a warning if the gcc version is less than 2.8.1 since that version has problems with register allocation for `long long'. ./html/Datatypes.html Documented sharing of data types between datasets. ./src/H5G.c ./src/H5Gpublic.h Implemented H5Gmove(), H5Glink() and H5Gunlink() for hard links. Still have soft links to do. ./src/H5AC.c ./src/H5ACprivate.h ./src/H5D.c ./src/H5E.c ./src/H5Eprivate.h ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Fsec2.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gpkg.h ./src/H5Gprivate.h ./src/H5HG.c ./src/H5HL.c ./src/H5HLprivate.h ./src/H5I.c ./src/H5Iprivate.h ./src/H5MM.c ./src/H5MMprivate.h ./src/H5O.c ./src/H5Oefl.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5S.c ./src/H5Ssimp.c ./src/H5T.c ./src/H5Tconv.c ./src/H5Tprivate.h ./src/H5Tpublic.h ./src/H5V.c ./src/H5Vprivate.h ./src/H5detect.c ./src/h5ls.c ./test/cmpd_dset.c ./test/dsets.c ./test/external.c ./test/hyperslab.c ./test/iopipe.c ./test/istore.c ./test/shtype.c ./test/tstab.c Fixed comparisons between signed and unsigned values. Fixed warnings about unused function arguments.
* [svn-r324] Change H5A (atoms) to H5I (IDs)Quincey Koziol1998-03-171-20/+20
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* [svn-r321] Changes since 19980306Robb Matzke1998-03-131-0/+3
| | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./src/H5D.c ./src/H5S.c ./src/H5Sprivate.h ./src/H5Ssimp.c ./src/H5Tpkg.h ./src/H5Tprivate.h ./src/H5V.c ./test/Makefile.in ./test/iopipe.c [NEW] Optimizations to the I/O pipeline. ./src/H5Fistore.c ./src/H5Oefl.c Fixed a few compiler warnings. ./MANIFEST Added entries for ./config/{intel-osf1,irix5.3}
* [svn-r303] Changes since 19980228Robb Matzke1998-03-041-369/+444
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./html/Dataspaces.html ./html/Errors.html ./html/Files.html ./html/H5.api.html ./html/review1.html ./src/H5private.h ./src/H5public.h ./test/dsets.c ./test/dtypes.c Removed all the types like `int32' and `intn' into private headers since they violate the naming scheme and pollute application name space. Besides, our test files only use them in a handful of places and it's probably useless to export them to the app. The app is always written in terms of standard numeric types or its own numeric types and probably never in terms of HDF5 numeric types. If it were, then the user would have to copy from their type to hdf5 type for almost every hdf5 API function call! Same goes for return values. I also removed SUCCEED/FAIL from the API since apps should be checking against zero anyway. if (FAIL==(space=H5Screate_simple(...))) /*wrong*/ if ((space=H5Fcreate_simple(...)<0)) /*right*/ ./src/H5.c Changed arguments of H5version() from `uintn' to `unsigned'. ./src/H5Tpublic.h ./src/H5T.c Changed return type of H5Tget_nmembers() from `intn' to `int' ./src/H5A.c ./src/H5Aprivate.h ./src/H5Apublic.h Changed `H5Asearch_func_t' to `H5A_search_func_t' and moved its definition from the public to the private header file. ./html/H5.format.html Documented changes made to the external file list (H5O_EFL) message. ./src/H5D.c ./src/H5Dprivate.h ./src/H5E.c ./src/H5Epublic.h ./src/H5O.c ./src/H5Oefl.c ./src/H5Oprivate.h ./src/H5P.c ./src/H5Ppublic.h Added partial support for external raw data files. HDF5 can now describe external raw data files by listing the file names, offsets, and size for a dataset. However, we will restrict a dataset to be stored "contiguously" when the external file list is viewed as a single address space. The current implementation is unable to read/write to external files--that will come later this week as will documentation. For now, take a look at ./test/external.c, particularly the calls to H5Pset_external(). ./test/Makefile.in ./test/external.c [NEW] ./MANIFEST Added tests for external storage. Note: the read test is supposed to fail at this point since reading external datasets is not implemented yet. There is no write test. ./src/H5S.c ./src/H5Sprivate.h ./src/H5Ssimp.c Added H5S_get_npoints_max() to return the maximum possible number of data points in a data space. Added an extra argument to H5S_get_dims() which returns the maximum dims. ./src/H5F.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5M.c [DEPRICATED] ./src/H5Mpublic.h [DEPRICATED] Changed `template' to `property list' in lots of places. ./src/H5Osdspace.c Removed an extra `\n' from a print statement. ./src/H5S_public.h Changed H5S_UNLIMITED to the maximum size_t value. ./test/extend.c "Extendable" is spelled "extendible". ./src/H5Farray.c ./src/H5V.c ./src/H5Vprivate.h ./test/hyperslab.c Strides are now type ssize_t instead of int. These have nothing to do with the sample granularity arguments for hyperslabs, which are also called "strides" in the code. ./test/tstab.c Changed assumptions about default address and length sizes.
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