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* [svn-r21262] Description:Quincey Koziol2011-08-181-358/+291
| | | | | | | | | Bring changes for "journaling" cache into "merging" branch, for further merging into the trunk. Tested on: Mac OS X/32 10.6.8 (amazon) (h5committest not required on this branch)
* [svn-r18911] Description:Quincey Koziol2010-05-271-39/+25
| | | | | | | | | More general changes to align trunk with eventual changes from metadata journaling branch. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug, production & parallel (h5committest not required on this branch)
* [svn-r18672] Description:Quincey Koziol2010-04-291-15/+15
| | | | | | | | | | | | | | | | | | Mostly changes to move to only using one 'user data' parameter for calls to H5AC_protect(), along with some minor reformatting code cleanups. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18519] Description:Quincey Koziol2010-04-061-10/+16
| | | | | | | | | | Bring metadata journaling branch into closer correspondence with trunk: extract data structure freeing routines from metadata cache client 'destroy' callbacks. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug, production & parallel (h5committest not required on this branch)
* [svn-r18196] Description:Quincey Koziol2010-01-301-1/+1
| | | | | | | | | Trim trailing whitespace from source files, with the following command: find . \( -name "*.[ch]" -or -name "*.cpp" -or -name "*.f90" \) -print |xargs -n 1 sed -i "" 's/[[:blank:]]*$//' Tested on: None - just eyeballed
* [svn-r18030] Description:Quincey Koziol2009-12-171-3/+3
| | | | | | | | | | | | | | | | | | | | | | | Bring "brush clearing" changes (whitespace & style issues, mostly) from metadata_journaling branch to the "merging" branch, to converge the trunk and the metadata_journaling branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.2 (amazon) in debug mode Mac OS X/32 10.6.2 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r13926] Description:Quincey Koziol2007-06-291-294/+358
| | | | | | | | | | | | Add small interface to "wrap" a static buffer (usually on the stack), but still allow for buffers larger than the static buffer to be allocated. This can eliminate _many_ short-lived buffer allocations in situations where the buffer is a predictable size (or at least a "very likely" size). Also, some minor code cleanups, particularly in the SOHM caching code. Tested on: Mac OS X/32 10.4.10 (amazon)
* [svn-r13770] Description:Quincey Koziol2007-05-191-2/+2
| | | | | | | Clean up various memory leaks, etc. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r13753] Description:Quincey Koziol2007-05-141-2/+2
| | | | | | | | | | | | | Check in "unique, but sharable" optimization to ISOHM code, which allows object header messages that are only used in one object to remain in the sole user's header, but migrates messages that are used in more than one header into the ISOHM heap. Tested on: Mac OS X/32 10.4.9 (amazon) FreeBSD/32 6.2 (duty) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13413] Description:Quincey Koziol2007-02-271-2/+1
| | | | | | | | | | | | | Further cleanups to superblock code: - Move most of the ISOHM-specific code into the H5SM module - Make only one checksum, for combined superblock & driver info block Minor other cleanups, etc. Tested on: Mac OS X/32 10.4.8 (amazon) FreeBSD/32 6.2 (duty)
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r13223] Description:Quincey Koziol2007-01-301-22/+21
| | | | | | | | | | | | Move datatype messages into new shared message method interface Clean up various formatting & compiler warnings Minor optimizations Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13159] Added h5debug support for shared message structures.James Laird2007-01-191-1/+10
| | | | | Tests run on juniper, kagiso, smirom. h5debug run manually on sample files on Windows, juniper, and kagiso.
* [svn-r13143] Refactoring.James Laird2007-01-161-20/+20
| | | | | | | | | | | | | | Added can_share callback for OH messages. This determines whether the message is allowed to be shared in the heap (committed and immutable datatypes can't be). Fixed a bug in the dense attribute storage that tried to open the shared message heap when it hadn't been created yet. Made the test to extend shared dataspace messages a bit more robust. Refactored the code the searches a shared message list index to be a little more efficient. A few other minor changes. Tested on smirom, kagiso, Windows, and juniper.
* [svn-r13135] Continuing code cleanup.James Laird2007-01-111-31/+28
| | | | | | | | | Moved SOHM table version out of table encoding and completely into superblock. This is a file format change. Added test that extends shared dataspaces. Dynamically allocate arrays in shared message cache code. Clean up comments. Tested on windows, kagiso, smirom.
* [svn-r13129] More refactoring. Moved index versions to the index header, so ↵James Laird2007-01-091-11/+11
| | | | | | | | that an index can be read all at once. This changes the file format! Tested on Windows, kagiso, and smirom.
* [svn-r13126] More cleanup. Shared messages now use in-heap callbacks when ↵James Laird2007-01-091-16/+5
| | | | | | | | searching for a matching message, which should improve performance. Tested on Windows, kagiso, and smirom.
* [svn-r13122] Description:Quincey Koziol2007-01-081-3/+6
| | | | | | | | | | Add more tests for attributes with shared components. Close memory leak in shared message table loading. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13119] More code cleanup. Made shared messages zero-indexed instead ofJames Laird2007-01-081-1/+1
| | | | | | one-indexed. Changed the names of some constants to be more consistent. Tested on juniper, smirom, and copper.
* [svn-r13113] Refactoring. Cleaned up code, added a few sanity checks.James Laird2007-01-051-11/+9
| | | | | | Extracted duplicated code into functions. Tested on Windows, juniper, and kagiso. Will test on copper next.
* [svn-r13105] Fixed a bug where buffer size didn't change when #defined ↵James Laird2007-01-031-2/+5
| | | | | | constants changed. Committing from Windows using Tortoise SVN. Cool!
* [svn-r13103] Description:Quincey Koziol2007-01-031-1/+1
| | | | | | | | | Bump table buf size to reflect current reality (and avoid smashing the stack :-) Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13102] Found a bug: shared message list sizes above the maximum were ↵James Laird2007-01-031-1/+1
| | | | | | | | | | | not caught. Fixed bug and a related one where the number of indexes could be set above the maximum. Added tests for both bugs. Tested on kagiso and smirom.
* [svn-r13079] Description:Quincey Koziol2006-12-191-7/+6
| | | | | | | | | | | | | | | | | | Add more tests for checking that writing to shared attributes works correctly. (Looks like it still has a bug when dense storage is used, which I'll correct shortly). Add testing routine to shared message code, to retrieve reference count for a shared message. Add fractal heap 'op' callback for efficiently computing the hash value of an existing encoded message in the shared message fractal heap. Various minor cleanups and warning placations. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13065] Added support for copying shared messages (including turning ↵James Laird2006-12-151-3/+13
| | | | | | | | | | | | unshared messages to shared messages and vice versa). Extended objcopy test to test all "permutations" of shared/unshared and new/old group format. If this proves to take a long time to test, I'll go back and have it run fewer tests when HDF5_TEST_EXPRESS is enabled. Tested on smirom, kagiso, copper, and Windows.
* [svn-r13034] Description:Quincey Koziol2006-12-081-4/+4
| | | | | | | | Take out separate memory type in the file for SOHM objects and create aliases for existing memory types for SOHM use. Tested on: FreeBSD/32 4.11 (sleipnir)
* [svn-r13006] Added checksumming to shared message metadata.James Laird2006-12-011-11/+46
| | | | Tested on kagiso, currently testing elsewhere.
* [svn-r13004] Much improved shared object header message test, along with ↵James Laird2006-12-011-2/+3
| | | | | | | | | | | some bug fixes to make the test pass. These changes involve changes to the file format of SOHMs, but that's okay because nobody should have been using SOHMs yet anyway. Tested on Windows, kagiso, copper, and heping
* [svn-r12988] Description:Quincey Koziol2006-11-271-2/+1
| | | | | | | | | General cleanups, in preparation for adding some attribute-tracking fields to the object header prefix. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12957] Clean up some purify warnings in the code by making sure thatJames Laird2006-11-211-0/+4
| | | | | | memory is always initialized. Tested on heping, kagiso, and juniper.
* [svn-r12935] Added list-to-btree conversion, changed SOHM apis, and pushed ↵James Laird2006-11-171-35/+33
| | | | | | | | | | | SOHM table version and size information into the superblock to eliminate a read when loading it. This is a file format change, and hopefully the last one (knock on wood). Tested on kagiso and Windows (mostly just a SOHM change).
* [svn-r12902] Checkin of Shared Object Header Message work.James Laird2006-11-131-0/+626
This feature is still in progress; Shared Object Header Messages are not complete as a feature and are not thoroughly tested. There are still "TODO" comments in the code (comments with the word "JAMES" in them, so as not to be confused with other TODO comments). Hopefully this checkin will reduce the liklihood of conflicts as I finish implementing this feature. All current tests pass on juniper, copper (parallel), heping, kagiso, and mir.
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