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* [svn-r18518] Description:Quincey Koziol2010-04-061-3/+3
| | | | | | | | | | Bring metadata journaling branch into closer correspondence with trunk: extract data structure freeing routines from metadata cache client 'destroy' callbacks. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (h5committest not required on this branch)
* [svn-r18452] Description:Quincey Koziol2010-03-251-5/+5
| | | | | | | | | | Finish renaming cache-related files & symbols on metadata journaling branch. Metadata cache-related symbols/files with no suffix now have a '1' suffix and symbols/files with a '2' suffix now have no suffix. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug, prod & parallel (h5committest not required on this branch)
* [svn-r15391] Purpose: metadata cache client conversionMike McGreevy2008-07-211-5/+15
| | | | | | | | Description: converted the shared object header message and index stored as a list metadata cache clients over to use the new journaling cache callbacks. Tested: kagiso, smirom
* [svn-r15388] Description:Quincey Koziol2008-07-201-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Convert object header cache client to use the new metadata journaling cache, which included adding a new client for handling continuation chunks. Added "real" protect calls around modifying chunks in object headers. Switched a few more metadata cache library API routines to drop the file pointer, when it is not needed (pinning/unpinning entries, etc.) Fixed bug in journaling cache handling of 'image_len' callbacks and also changed cache to retry deserializing entries when the entry's size is larger than the speculative size initially tried. Retrying for 'image_len' callbacks has problems with the 'multi' VFD, so the h5dump and FORTRAN 'multi' tests are commented out, until the changes to the 'multi' VFD from the file free space branch are brought back into the trunk. Currently, the 'h5recover' tool has a bug which requires it to be run twice before replaying the journal "sticks". However, this is from an earlier checkin, since the code in the branch already has this behavior... :-( Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.5.4 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r13926] Description:Quincey Koziol2007-06-291-29/+46
| | | | | | | | | | | | Add small interface to "wrap" a static buffer (usually on the stack), but still allow for buffers larger than the static buffer to be allocated. This can eliminate _many_ short-lived buffer allocations in situations where the buffer is a predictable size (or at least a "very likely" size). Also, some minor code cleanups, particularly in the SOHM caching code. Tested on: Mac OS X/32 10.4.10 (amazon)
* [svn-r13770] Description:Quincey Koziol2007-05-191-0/+2
| | | | | | | Clean up various memory leaks, etc. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r13753] Description:Quincey Koziol2007-05-141-20/+50
| | | | | | | | | | | | | Check in "unique, but sharable" optimization to ISOHM code, which allows object header messages that are only used in one object to remain in the sole user's header, but migrates messages that are used in more than one header into the ISOHM heap. Tested on: Mac OS X/32 10.4.9 (amazon) FreeBSD/32 6.2 (duty) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13500] Description:Quincey Koziol2007-03-121-1/+2
| | | | | | | | | Roll changes to SOHM v2 B-tree records into format, to get the format for them stable while I'm working on debugging the actual support for the "unique, but sharable" feature. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r13367] Description:Quincey Koziol2007-02-211-3/+10
| | | | | | | | | | Allow "big" attributes to push attribute storage into "dense" form immediately, to accomodate storing the attribute. (This is only allowed in the "latest" version of the format). Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13344] Description:Quincey Koziol2007-02-201-2/+0
| | | | | | | | More progress on attribute deletion by index. Tested on: Mac OS X/32 10.4.8 (amazon) FreeBSD/32 6.2 (duty)
* [svn-r13340] Fixed a bug where shared messages with the same hash values ↵James Laird2007-02-201-1/+1
| | | | | | | | | | could be sorted in the wrong order. This also makes the "unique but shareable" checkin a little easier. Tested on smirom, kagiso, and juniper.
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r13159] Added h5debug support for shared message structures.James Laird2007-01-191-0/+2
| | | | | Tests run on juniper, kagiso, smirom. h5debug run manually on sample files on Windows, juniper, and kagiso.
* [svn-r13155] Description:Quincey Koziol2007-01-191-2/+2
| | | | | | | | | | | | | | Add "set_crt_index" and "get_crt_index" methods for the object header message class. Unify fractal heap definitions for shared messages and attributes, under "object header" fractal heap definitions. Initial code for adding creation order index to object header messages. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13143] Refactoring.James Laird2007-01-161-1/+2
| | | | | | | | | | | | | | Added can_share callback for OH messages. This determines whether the message is allowed to be shared in the heap (committed and immutable datatypes can't be). Fixed a bug in the dense attribute storage that tried to open the shared message heap when it hadn't been created yet. Made the test to extend shared dataspace messages a bit more robust. Refactored the code the searches a shared message list index to be a little more efficient. A few other minor changes. Tested on smirom, kagiso, Windows, and juniper.
* [svn-r13135] Continuing code cleanup.James Laird2007-01-111-4/+0
| | | | | | | | | Moved SOHM table version out of table encoding and completely into superblock. This is a file format change. Added test that extends shared dataspaces. Dynamically allocate arrays in shared message cache code. Clean up comments. Tested on windows, kagiso, smirom.
* [svn-r13129] More refactoring. Moved index versions to the index header, so ↵James Laird2007-01-091-2/+2
| | | | | | | | that an index can be read all at once. This changes the file format! Tested on Windows, kagiso, and smirom.
* [svn-r13127] Refactoring. Cleaned up some buggy code when searching for ↵James Laird2007-01-091-4/+5
| | | | | | | | messages in B-trees. Tested on Windows, smirom, and kagiso.
* [svn-r13126] More cleanup. Shared messages now use in-heap callbacks when ↵James Laird2007-01-091-1/+1
| | | | | | | | searching for a matching message, which should improve performance. Tested on Windows, kagiso, and smirom.
* [svn-r13121] Description:Quincey Koziol2007-01-081-12/+10
| | | | | | | | | | Add support & tests for using shared datatypes with shared & un-shared attributes. Involves some fairly icky code to make the "copy on write" paradigm for shared attributes work. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13116] Description:Quincey Koziol2007-01-061-19/+21
| | | | | | | | | | | | Add support for deleting all the attributes on an object, when they are dense and possibly shared. Also, add some testing routines, for better error detection. Should fix daily test failures also... Tested on: FreeBSD/32 6.1 (duty)
* [svn-r13113] Refactoring. Cleaned up code, added a few sanity checks.James Laird2007-01-051-7/+5
| | | | | | Extracted duplicated code into functions. Tested on Windows, juniper, and kagiso. Will test on copper next.
* [svn-r13102] Found a bug: shared message list sizes above the maximum were ↵James Laird2007-01-031-3/+0
| | | | | | | | | | | not caught. Fixed bug and a related one where the number of indexes could be set above the maximum. Added tests for both bugs. Tested on kagiso and smirom.
* [svn-r13079] Description:Quincey Koziol2006-12-191-9/+43
| | | | | | | | | | | | | | | | | | Add more tests for checking that writing to shared attributes works correctly. (Looks like it still has a bug when dense storage is used, which I'll correct shortly). Add testing routine to shared message code, to retrieve reference count for a shared message. Add fractal heap 'op' callback for efficiently computing the hash value of an existing encoded message in the shared message fractal heap. Various minor cleanups and warning placations. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13010] Cleaned up warnings in H5SM* files.James Laird2006-12-021-4/+4
| | | | Cleaned up all warnings on kagiso. Tested on kagiso and copper.
* [svn-r13006] Added checksumming to shared message metadata.James Laird2006-12-011-2/+4
| | | | Tested on kagiso, currently testing elsewhere.
* [svn-r13004] Much improved shared object header message test, along with ↵James Laird2006-12-011-1/+3
| | | | | | | | | | | some bug fixes to make the test pass. These changes involve changes to the file format of SOHMs, but that's okay because nobody should have been using SOHMs yet anyway. Tested on Windows, kagiso, copper, and heping
* [svn-r12935] Added list-to-btree conversion, changed SOHM apis, and pushed ↵James Laird2006-11-171-5/+13
| | | | | | | | | | | SOHM table version and size information into the superblock to eliminate a read when loading it. This is a file format change, and hopefully the last one (knock on wood). Tested on kagiso and Windows (mostly just a SOHM change).
* [svn-r12902] Checkin of Shared Object Header Message work.James Laird2006-11-131-0/+174
This feature is still in progress; Shared Object Header Messages are not complete as a feature and are not thoroughly tested. There are still "TODO" comments in the code (comments with the word "JAMES" in them, so as not to be confused with other TODO comments). Hopefully this checkin will reduce the liklihood of conflicts as I finish implementing this feature. All current tests pass on juniper, copper (parallel), heping, kagiso, and mir.
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