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* Normalization with hdf5_1_10Dana Robinson2020-06-011-47/+47
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* Merge branch 'develop' into bugfix/intel_warningskmu2019-12-091-1/+4
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| * Two fixes:Vailin Choi2019-12-051-0/+3
| | | | | | | | | | (1) Set the version for reference datatype messge to H5O_DTYPE_VERSION_4. (2) Verify the decoded version for hyperslab selection.
| * Add support for scalar dataspaces to H5Sproject_intersection. AddNeil Fortner2019-12-021-1/+1
| | | | | | | | checking for ank validity.
* | remove unnecessary check macrokmu2019-12-061-1/+1
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* | fix intel compile warningskmu2019-12-041-1/+1
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* Move checking for zero offset in selection adjust calls to the selection ↵Neil Fortner2019-11-181-22/+33
| | | | | | | callbacks. This makes the procedure for checking it consistent across selection types and between _s and _u, ensures it is always is performed even when called within the H5S package, and removes the redundant check that would occur when callins H5S_select_adjust_s() from outside the H5S package.
* Replace H5Sselect_adjust_u() and H5Shyper_adjust_s() withNeil Fortner2019-11-181-48/+9
| | | | | H5Sselect_adjust. Implement "adjust_s" callback for all selection types. Add range checking to H5Sselect_adjust().
* Implement public H5Sselect_project_intersection(). Updated internalNeil Fortner2019-11-131-87/+189
| | | | | | | | algorithm to (optionally) avoid sharing selection data structures. Tested internal code (including with valgrind) by setting VDS code to avoid sharing selection, has since been changed to share selection for performance, so this code is not yet tested in regression tests. API has not been tested.
* Fix the errors when updating the versions in the new 1.13 develop branch.Vailin Choi2019-09-261-1/+1
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* Update versioning to next major versionAllen Byrne2019-09-251-214/+215
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* Added public H5Sselect_adjust_u and H5Shyper_adjust_s calls.Dana Robinson2019-08-151-0/+41
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* Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, alongQuincey Koziol2019-07-301-64/+50
| | | | with tests and minor cleanups and refactorings.
* Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-211-0/+8
| | | | clean up warnings.
* Merge pull request #1747 in HDFFV/hdf5 from ↵Dana Robinson2019-06-181-6/+10
|\ | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:vds_memory_bug to develop * commit '8d67b440f7d94f1b191ce154a41685bcaa90fd12': Reset the other convenience pointer because why no Fixed a memory bug where a pointer is used after it's been freed.
| * Reset the other convenience pointer because why noDana Robinson2019-06-181-6/+7
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| * Fixed a memory bug where a pointer is used after it's been freed.Dana Robinson2019-06-181-6/+9
| | | | | | | | This is going to need a release note when it's moved to 1.10.
* | Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, toQuincey Koziol2019-06-171-2/+9
| | | | | | | | | | share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open).
* | Fix misc. typos, etc. from code reviewQuincey Koziol2019-06-171-18/+18
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* | New hyperslab selection routines and new public selection iterator routines.Quincey Koziol2019-06-161-5/+304
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* Minor fixes/improvements for VDS performance improvement (HDFFV-10693).Neil Fortner2019-06-031-15/+17
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* Refactor H5S__hyper_project_intersection to operate directly on spanNeil Fortner2019-06-011-335/+716
| | | | | trees, improving performance and removing the conditionn that the extents be equal.
* Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-291-214/+658
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| * HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change.Vailin Choi2019-04-061-207/+673
| | | | | | | | This also addresses HDFFV-10255: H5Sencode/decode performance issue.
* | Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-061-20/+65
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| * Merge pull request #1644 in HDFFV/hdf5 from ↵Vailin Choi2019-04-061-0/+1
| |\ | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10271-version-2-hyperslab-encoding to develop * commit '7fe665ebff3e86aaf1eef92199f757a5c0d1fe80': Fix for HDFFV-10271 hyperslab encoding incorrect length.
| | * Fix for HDFFV-10271 hyperslab encoding incorrect length.Vailin Choi2019-04-051-0/+1
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| * | Move dataspace selection-specific coding to the callbacks as preparation for ↵Vailin Choi2019-04-051-20/+64
| |/ | | | | | | the H5Sencode changes.
* | Clean up if-else chain.Quincey Koziol2019-03-201-26/+24
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* | Remove thread-local copy of hyperslab operation generation value.Quincey Koziol2019-03-191-85/+4
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* | Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-03-171-24/+25
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| * - Added H5MMprivate.h #includes where neededDana Robinson2019-03-161-0/+1
| | | | | | | | | | - Added casts to quiet H5MM_memcpy warnings - Removed char * casts from HDmemcpy
| * Added an H5MM_memcpy call that checks for buffer overlap.Dana Robinson2019-03-161-10/+10
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* | Core changes to selection code from the hyperslab_updates branch.Quincey Koziol2019-03-161-1928/+3735
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* More changes to align with incoming selection improvements.Quincey Koziol2019-02-141-2458/+1330
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* Align develop with incoming hyperslab_updates branch changes.Quincey Koziol2019-02-131-173/+181
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* Delta reduction against hyperslab_updates branch.Quincey Koziol2019-01-111-111/+99
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* H5S adjust callbacks now return an herr_t instead of void.Dana Robinson2018-09-241-4/+4
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* Removed white spaceBinh-Minh Ribler2018-07-171-1/+2
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* Fixed HDFFV-10476, HDFFV-10478, HDFFV-10480Binh-Minh Ribler2018-07-171-2/+3
| | | | | | | | | Description: Fixed potential out of bound read and NULL pointer dereferences. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
* Fixed HDFFV-10404Binh-Minh Ribler2018-07-131-10/+10
| | | | | | | | | Description: Applied the typo fixes from user's report. The previous pull request couldn't be merged because it was too old, and it was too complicated for me to resolve conflicts. Platform tested: Linux/64 (jelly) - very minor
* Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-275/+96
| | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-081-1486/+1462
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| * Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-04-291-7/+5
| |\ | | | | | | | | | merge_hyperslab_updates
| | * Added missing casts for the return value of H5I_object_verify().Dana Robinson2017-05-241-6/+6
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| | * Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
| * | Checkpoint normalization against incoming hyperslab / selection / dataspaceQuincey Koziol2017-03-281-1500/+1478
| |/ | | | | | | improvements.
* | Re-factor coding for H5P/Sencode with libver bounds.Vailin Choi2018-03-121-17/+35
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* | Resolve compilation errors.Vailin Choi2018-03-091-1/+1
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* | Fix for HDFFV-9947 H5SencodeVailin Choi2017-11-281-82/+245
| | | | | | | | Modifications to fix H5Sencode bug when num points selected is > 2^32.
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