| Commit message (Collapse) | Author | Age | Files | Lines |
| |
|
| |
|
|
|
|
| |
This reverts commit 8b9338ab57eec0cc8fa5a36c44d7b28e52e9a466.
|
|
|
|
| |
This reverts commit d242a900f420b040e364f6c0976c01593e955db3.
|
|
|
|
| |
This reverts commit fc61b7a9f3a38331809ebcb6247482943947cdb8.
|
| |
|
| |
|
| |
|
|
|
|
|
| |
(1) Set the version for reference datatype messge to H5O_DTYPE_VERSION_4.
(2) Verify the decoded version for hyperslab selection.
|
|
|
|
| |
checking for ank validity.
|
|
|
|
|
|
|
| |
callbacks. This makes the
procedure for checking it consistent across selection types and between
_s and _u, ensures it is always is performed even when called within the H5S package, and removes the redundant check that would occur when callins H5S_select_adjust_s() from outside the H5S package.
|
|
|
|
|
| |
H5Sselect_adjust. Implement "adjust_s" callback for all selection
types. Add range checking to H5Sselect_adjust().
|
|
|
|
|
|
|
|
| |
algorithm to (optionally) avoid sharing selection data structures.
Tested internal code (including with valgrind) by setting VDS code to
avoid sharing selection, has since been changed to share selection for
performance, so this code is not yet tested in regression tests. API
has not been tested.
|
|
|
|
|
|
|
|
| |
including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and
I share.
Now I need to put this branch on a fork with a less confusing name than
vchoi_fork!
|
| |
|
| |
|
|
|
|
|
|
|
|
|
| |
Description:
Fixed potential out of bound read and NULL pointer dereferences.
Platforms tested:
Linux/64 (jelly)
Linux/32 (jam)
Darwin (osx1010test)
|
|
|
|
|
|
|
|
|
| |
Description:
Applied the typo fixes from user's report.
The previous pull request couldn't be merged because it was too old,
and it was too complicated for me to resolve conflicts.
Platform tested:
Linux/64 (jelly) - very minor
|
|
|
|
|
|
|
| |
~HDFTEST/hdf5_hft:hdf5_1_10 to develop"
This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing
changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
|
|\ |
|
| |\
| | |
| | |
| | | |
merge_hyperslab_updates
|
| | | |
|
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | |
| | | |
hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
|
| |/
| |
| |
| | |
improvements.
|
| | |
|
| | |
|
| |
| |
| |
| | |
Modifications to fix H5Sencode bug when num points selected is > 2^32.
|
| |
| |
| |
| | |
(cherry picked from commit 8807f918b9b00916efa822dda0301d3aa9debd80)
|
|/
|
|
|
|
|
|
| |
and replace it with new url for COPYING file.
Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
|
|
|
|
|
|
|
|
|
| |
Clean up more warnings: drop the warning count from ~1310 down to ~940,
with only 31 types of warnings in 148 files (down from 38 types in 167 files).
Tested on:
MacOSX/64 10.11.5 (amazon) w/serial & parallel
(h5committest forthcoming)
|
|
|
|
|
|
|
|
|
|
| |
Revisions to normalize revise chunks vs. trunk, plus push dataset metadata
changes into the cache immediately (instead of holding them within the dataset
data structures).
Tested on:
MacOSX/64 10.11.2 (amazon) w/serial & parallel
(h5committest not required on this branch)
|
|\
| |
| |
| |
| |
| |
| |
| | |
H5S recursive functions where an aliased pointer was
incorrectly set too early.
Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2
serial and parallel (w/ MPICH 3.1.4)
|
| |
| |
| |
| |
| |
| |
| |
| | |
Fix typo in last checkin. *sigh*
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest forthcoming)
|
| |
| |
| |
| |
| |
| |
| |
| | |
changes will be merged more carefully so we can more easily
identify any errors that arise.
Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2
serial and parallel (w/ MPICH 3.1.4)
|
|\ \
| |/
| |
| |
| |
| |
| |
| | |
Merge changes from trunk to the branch.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest not required on this branch)
|
| |
| |
| |
| |
| |
| |
| |
| |
| | |
Update dataspace selection encode/decode routines to avoid type aliasing
errors.
Tested on:
Linux/64 2.6.x (platypus) w/production
(h5committest forthcoming)
|
| |
| |
| |
| |
| |
| |
| |
| | |
Normalize against incoming changes on VDS branch.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial
(h5committest forthcoming)
|
| |
| |
| |
| |
| |
| |
| |
| | |
Clean up warnings and some normalization against trunk.
Tested:
McaOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest not required on this branch)
|
|\ \
| |/
| |
| |
| |
| |
| |
| | |
Sync w/trunk.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(h5committest not required on this branch)
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.
This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.
Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)
Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
Linux/64 3.10.x (kituo) w/serial & parallel
Linux/64 2.6.x (ostrich) w/serial
|
| |
| |
| |
| |
| |
| |
| |
| | |
Make error values from hyperslab operations clearer.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial & parallel
(Too minor to require h5committest)
|
| |
| |
| |
| |
| |
| |
| |
| | |
recent fix to
H5Screate().
Tested: ummon
|
| |
| |
| |
| | |
Tested: ummon
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
Revert changes to pass file pointer to selection serialize/deserialize
routines. Also patch back in some changes that were merged out in the
previous merge w/trunk.
Tested on:
MacOSX/64 10.10.5 (amazon) w/serial
(h5committest not required on this branch)
|
| |
| |
| |
| |
| |
| |
| |
| |
| | |
H5Shyper.c.
Add more tests for unlimited selections.
Fix bug related to empty unlimited source dataset.
Tested: ummon
|
| |
| |
| |
| |
| |
| | |
Other items identified during reviews.
Tested: ummon
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
selections, incorrect
numbers of elements selected, incorrect "slice" through limited dimensions,
incorrect number of printf substitutions.
Patch source selection space extent with bounds of selection if extent is
unknown before returning via H5Pget_virtual_srcspace.
Write updated VDS dataspace to file when it changes due to unlimited selections.
Other minor fixes/cleanup.
Tested: ummon
|
| |
| |
| |
| |
| |
| |
| | |
Other comments.
Add some input checking.
Tested: ummon
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
file and dataset
to open source files and datasets, instead of using the default property lists.
Modify VDS to reject attempts at parallel I/O, fix parallel compile error.
Modify VDS to not write fill value to memory buffer if the fill value is
undefined.
Other minor fixes/cleanup.
Tested: ummon
|
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| | |
them from the
extent.
Improve algorithm for calculation of VDS extent by removing the need for a
temporary copy of a dataspace.
Other minor fixes/cleanup.
Tested: ummon
|