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* Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-211-0/+8
| | | | clean up warnings.
* Merge pull request #1747 in HDFFV/hdf5 from ↵Dana Robinson2019-06-181-6/+10
|\ | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:vds_memory_bug to develop * commit '8d67b440f7d94f1b191ce154a41685bcaa90fd12': Reset the other convenience pointer because why no Fixed a memory bug where a pointer is used after it's been freed.
| * Reset the other convenience pointer because why noDana Robinson2019-06-181-6/+7
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| * Fixed a memory bug where a pointer is used after it's been freed.Dana Robinson2019-06-181-6/+9
| | | | | | | | This is going to need a release note when it's moved to 1.10.
* | Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, toQuincey Koziol2019-06-171-2/+9
| | | | | | | | | | share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open).
* | Fix misc. typos, etc. from code reviewQuincey Koziol2019-06-171-18/+18
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* | New hyperslab selection routines and new public selection iterator routines.Quincey Koziol2019-06-161-5/+304
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* Minor fixes/improvements for VDS performance improvement (HDFFV-10693).Neil Fortner2019-06-031-15/+17
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* Refactor H5S__hyper_project_intersection to operate directly on spanNeil Fortner2019-06-011-335/+716
| | | | | trees, improving performance and removing the conditionn that the extents be equal.
* Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-291-214/+658
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| * HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change.Vailin Choi2019-04-061-207/+673
| | | | | | | | This also addresses HDFFV-10255: H5Sencode/decode performance issue.
* | Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-04-061-20/+65
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| * Merge pull request #1644 in HDFFV/hdf5 from ↵Vailin Choi2019-04-061-0/+1
| |\ | | | | | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-10271-version-2-hyperslab-encoding to develop * commit '7fe665ebff3e86aaf1eef92199f757a5c0d1fe80': Fix for HDFFV-10271 hyperslab encoding incorrect length.
| | * Fix for HDFFV-10271 hyperslab encoding incorrect length.Vailin Choi2019-04-051-0/+1
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| * | Move dataspace selection-specific coding to the callbacks as preparation for ↵Vailin Choi2019-04-051-20/+64
| |/ | | | | | | the H5Sencode changes.
* | Clean up if-else chain.Quincey Koziol2019-03-201-26/+24
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* | Remove thread-local copy of hyperslab operation generation value.Quincey Koziol2019-03-191-85/+4
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* | Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01Quincey Koziol2019-03-171-24/+25
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| * - Added H5MMprivate.h #includes where neededDana Robinson2019-03-161-0/+1
| | | | | | | | | | - Added casts to quiet H5MM_memcpy warnings - Removed char * casts from HDmemcpy
| * Added an H5MM_memcpy call that checks for buffer overlap.Dana Robinson2019-03-161-10/+10
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* | Core changes to selection code from the hyperslab_updates branch.Quincey Koziol2019-03-161-1928/+3735
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* More changes to align with incoming selection improvements.Quincey Koziol2019-02-141-2458/+1330
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* Align develop with incoming hyperslab_updates branch changes.Quincey Koziol2019-02-131-173/+181
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* Delta reduction against hyperslab_updates branch.Quincey Koziol2019-01-111-111/+99
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* H5S adjust callbacks now return an herr_t instead of void.Dana Robinson2018-09-241-4/+4
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* Removed white spaceBinh-Minh Ribler2018-07-171-1/+2
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* Fixed HDFFV-10476, HDFFV-10478, HDFFV-10480Binh-Minh Ribler2018-07-171-2/+3
| | | | | | | | | Description: Fixed potential out of bound read and NULL pointer dereferences. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
* Fixed HDFFV-10404Binh-Minh Ribler2018-07-131-10/+10
| | | | | | | | | Description: Applied the typo fixes from user's report. The previous pull request couldn't be merged because it was too old, and it was too complicated for me to resolve conflicts. Platform tested: Linux/64 (jelly) - very minor
* Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-275/+96
| | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-081-1486/+1462
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| * Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-04-291-7/+5
| |\ | | | | | | | | | merge_hyperslab_updates
| | * Added missing casts for the return value of H5I_object_verify().Dana Robinson2017-05-241-6/+6
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| | * Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
| * | Checkpoint normalization against incoming hyperslab / selection / dataspaceQuincey Koziol2017-03-281-1500/+1478
| |/ | | | | | | improvements.
* | Re-factor coding for H5P/Sencode with libver bounds.Vailin Choi2018-03-121-17/+35
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* | Resolve compilation errors.Vailin Choi2018-03-091-1/+1
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* | Fix for HDFFV-9947 H5SencodeVailin Choi2017-11-281-82/+245
| | | | | | | | Modifications to fix H5Sencode bug when num points selected is > 2^32.
* | Added missing casts for the return value of H5I_object_verify().Dana Robinson2017-05-251-6/+6
| | | | | | | | (cherry picked from commit 8807f918b9b00916efa822dda0301d3aa9debd80)
* | Change copyright headers to replace url referring to file to be removedlrknox2017-04-141-6/+4
|/ | | | | | | | and replace it with new url for COPYING file. Fix 2 lines in java error test expected output file where messages include line numbers changed by reducing the copyright header by 2 lines.
* [svn-r30189] Description:Quincey Koziol2016-07-181-21/+39
| | | | | | | | | Clean up more warnings: drop the warning count from ~1310 down to ~940, with only 31 types of warnings in 148 files (down from 38 types in 167 files). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28606] Description:Quincey Koziol2015-12-131-1/+1
| | | | | | | | | | Revisions to normalize revise chunks vs. trunk, plus push dataset metadata changes into the cache immediately (instead of holding them within the dataset data structures). Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r27916] Re-merge of r27884-27891 from the trunk + bugfix for a fewDana Robinson2015-09-301-42/+53
|\ | | | | | | | | | | | | | | H5S recursive functions where an aliased pointer was incorrectly set too early. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2 serial and parallel (w/ MPICH 3.1.4)
| * [svn-r27888] Description:Quincey Koziol2015-09-271-1/+1
| | | | | | | | | | | | | | | | Fix typo in last checkin. *sigh* Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* | [svn-r27912] Revert of r27887, which caused failures in the vds test. TheseDana Robinson2015-09-291-54/+40
| | | | | | | | | | | | | | | | changes will be merged more carefully so we can more easily identify any errors that arise. Tested on: Ubuntu 15.04 (Linux 3.19 x86_64) w/ gcc 4.9.2 serial and parallel (w/ MPICH 3.1.4)
* | [svn-r27887] Description:Quincey Koziol2015-09-271-40/+54
|\ \ | |/ | | | | | | | | | | | | Merge changes from trunk to the branch. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27884] Description:Quincey Koziol2015-09-261-31/+45
| | | | | | | | | | | | | | | | | | Update dataspace selection encode/decode routines to avoid type aliasing errors. Tested on: Linux/64 2.6.x (platypus) w/production (h5committest forthcoming)
| * [svn-r27849] Description:Quincey Koziol2015-09-221-12/+15
| | | | | | | | | | | | | | | | Normalize against incoming changes on VDS branch. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (h5committest forthcoming)
* | [svn-r27848] Description:Quincey Koziol2015-09-221-1/+0
| | | | | | | | | | | | | | | | Clean up warnings and some normalization against trunk. Tested: McaOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
* | [svn-r27835] Description:Quincey Koziol2015-09-211-31/+35
|\ \ | |/ | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27768] Description:Quincey Koziol2015-09-141-16/+17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
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