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* [svn-r11884] Snapshot version 1.7 release 57HDF Admin2006-01-221-1/+1
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* [svn-r11880] Snapshot version 1.7 release 56HDF Admin2006-01-151-1/+1
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* [svn-r11864] Purpose:James Laird2006-01-051-3/+3
| | | | | | | | | | | | | | | | Cleaned up reconfigure output Description: Added two lines to separate output from trace script from autotools output in reconfigure. Solution: Running reconfigure updated src/Makefile.in as a side effect, since I changed config/lt_vers.am in my last checkin but forgot to run reconfigure then. Platforms tested: mir (cosmetic change to reconfigure script only)
* [svn-r11850] Purpose:James Laird2006-01-021-12/+12
| | | | | | | | | | | | | | Feature Description: Added character encoding and attribute creation property lists. Solution: Attributes' character encoding is set via the ACPL. The default is ASCII, with UTF-8 being the other option currently. Platforms tested: heping, mir, sleipnir, copper
* [svn-r11848] Snapshot version 1.7 release 55HDF Admin2006-01-011-1/+1
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* [svn-r11836] Snapshot version 1.7 release 54HDF Admin2005-12-251-1/+1
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* [svn-r11795] Snapshot version 1.7 release 54HDF Admin2005-12-141-1/+1
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* [svn-r11761] Purpose:Albert Cheng2005-12-051-1/+1
| | | | | | | | | | | | | Unstable format version marker. Description: This marks the Check in baseline for compact group revisions, which radically revises the source code for managing groups and object headers. Earlier versions (1.7.52 or earlier) have the original format. This version and later have the unstable format until further notice. Platforms tested: h5committested.
* [svn-r11758] Purpose:Quincey Koziol2005-12-041-28/+35
| | | | | | | | | | | | | New feature Description: Add in a combination of Peter's & my code to support copying variable-length data from one file to another, although currently only supported with contiguous data storage. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11741] Purpose:James Laird2005-11-181-6/+16
| | | | | | | | | | | | | | | | | Bug fix Description: Fortran type generation was broken in two ways. Fixed both. Solution: Firstly, there were a couple of path problems. Fixed a typo and specified the full path of a file. Secondly, the dependencies weren't right when building with HDF5-specific commands (make lib, make check-s, etc.). Tweaked dependencies to fix the problem. Platforms tested: mir, modi4, sleipnir
* [svn-r11738] Purpose:James Laird2005-11-181-0/+22
| | | | | | | | | | | | | | | | | | | Configure feature Description: Added 'make trace' target. Solution: Added tracing to 1.7. This was done automatically in 1.6, but left out of 1.7 until now (oops!). Tracing in 1.7 only happens manually, when the user types 'make trace.' Tracing automatically requires more framework than it's worth. I also fixed a couple of tracing bugs and ran trace. Platforms tested: mir, sleipnir, modi4 Misc. update:
* [svn-r11737] Purpose:James Laird2005-11-171-0/+8
| | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: Before this checkin, 'gmake check-s' would fail if there was a file in the current directory named 'check-s'. This is fixed under gmake (not sure how to fix for other makes). Solution: check, progs, install, etc. are what gmake calls "phony" targets, which means that no file should be created. These targets can be specified by a line of the form .PHONY: check progs install ... Automake adds this line for targets it knows about, but HDF5 has a lot of custom rules. This checkin adds a .PHONY line for those rules. I believe that only gmake recognizes the .PHONY line (at least, pmake doesn't seem to), but a partial solution is better than none. This error should occur very rarely anyway (the user has to manually create files with names like 'build-check-s' or '_test'). Platforms tested: mir, sleipnir, modi4
* [svn-r11712] Purpose:Quincey Koziol2005-11-151-7/+25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | New feature Description: Check in baseline for compact group revisions, which radically revises the source code for managing groups and object headers. WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! This initiates the "unstable" phase of the 1.7.x branch, leading up to the 1.8.0 release. Please test this code, but do _NOT_ keep files created with it - the format will change again before the release and you will not be able to read your old files!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! WARNING!!!! Solution: There's too many changes to really describe them all, but some of them include: - Stop abusing the H5G_entry_t structure and split it into two separate structures for non-symbol table node use within the library: H5O_loc_t for object locations in a file and H5G_name_t to store the path to an opened object. H5G_entry_t is now only used for storing symbol table entries on disk. - Retire H5G_namei() in favor of a more general mechanism for traversing group paths and issuing callbacks on objects located. This gets us out of the business of hacking H5G_namei() for new features, generally. - Revised H5O* routines to take a H5O_loc_t instead of H5G_entry_t - Lots more... Platforms tested: h5committested and maybe another dozen configurations.... :-)
* [svn-r11686] Purpose:Quincey Koziol2005-11-071-5/+7
| | | | | | | | | | | | | | | | | | | New feature Description: Add in baseline "object copy" code from Peter [in the form of a new API routine: H5Gcopy()]. There's still some work to do (like handling variable- length datatypes and possibly support for references) and it hasn't been tested on mounted files yet, but the core functionality is there and working correctly. I've also got a set of patches to update the 1.6 branch with tweaks to keep the branches mostly in sync, but Elena will kill me if I import them before the 1.6.5 release is out... :-) Platforms tested: FreeBSD 4.11 (sleipnir) h5committested
* [svn-r11646] Purpose:James Laird2005-10-311-4/+14
| | | | | | | | | | | | | | | | | | Bug fix/feature Description: Added support for -shlib in h5fc and h5c++. Made check-install use -shlib when only shared libraries have been installed. Solution: h5fc and h5c++ didn't recognize -shlib. Stole code from h5cc to link against shared libraries. When static libraries are disabled, the examples Makefiles will automatically use the -shlib option to link against shared libraries. Thus, --disable-static and make check-install should work together. Platforms tested: heping(disable-static, enable-static, fortran, c++), modi4 (disable-static, fortran, c++, parallel, enable-static)
* [svn-r11612] Purpose:James Laird2005-10-271-1/+1
| | | | | | | | | | | | | Bug fix Description: Failed parallel tests now cause make to exit with an error. Solution: Edited config/conclude.am to throw an error if parallel test programs fail. Platforms tested: heping, modi4
* [svn-r11602] Purpose:James Laird2005-10-241-3/+0
| | | | | | | | | | | | Bug fix Description: Removed detection of pdb from configure.in as a corollary to removal of pdb2hdf5 tool. Platforms tested: mir, modi4
* [svn-r11573] Purpose:James Laird2005-10-171-0/+1
| | | | | | | | | | | | | | | | | | | | Bug fix Description: Changed configure.in to use an environment variable TR to set the path to the tr utility. Solution: There are two kind of tr on Solaris with slightly different syntax. HDF5's configure relies on the "standard" tr. Traditionally, HDF5ers have needed to make sure that the "right" tr was found before the wrong one in their path; now they can use an environment variable. Platforms tested: mir, shanti, sol Misc. update: Forgot to update release notes. Off to do that now.
* [svn-r11566] Purpose:James Laird2005-10-141-0/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | Makefile bug fix Description: Previously, automake didn't output rules to build perform/mpi-perf or the test/gen_* programs. Now these can be built by typing 'make mpi-perf' (or 'make foo') or by configuring with --enable-build-all. Solution: Automake doesn't like having rules for programs it doesn't build. Tricked it by having these programs built "sometimes"--whenever the user enables --build-all. This should be used mostly for testing and to ensure that these helper programs compile. ***IMPORTANT*** These programs do *not* currently compile. When --enable-build-all is used (not the default), gen_new_fill fails because it uses an old API. This is an existing "bug" that has simply been exposed by this checkin. Platforms tested: sleipnir, modi4, sol Misc. update:
* [svn-r11489] Snapshot version 1.7 release 51HDF Admin2005-10-021-1/+1
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* [svn-r11478] Purpose:Albert Cheng2005-09-291-8/+7
| | | | | | | | | | | | | | | | bug fix. Description: When a parallel test script test fails, make would continue because the way it was setup inside a for loop. Fixed it by issuing an exit 1 inside the loop. There was also a typo error in the newer command comparision that it must be $${chkname} in order to be valid. Also, the test script itself was not checked in the newer lists. All fixed. Platforms tested: h5committested and also hand tested in heping pp mode.
* [svn-r11446] Purpose:James Laird2005-09-201-2/+3
| | | | | | | | | | | Bug fix Description: Massaged the newer script and config/conclude.am to make SX6 happy. Platforms tested: SX6, sol, mir
* [svn-r11431] Purpose:Albert Cheng2005-09-181-2/+3
| | | | | | | | | | | | | | | | | New feature. Description: Added the time command to the make check target to report time usage of the execute of each test and test scripts. This gives us some idea how long each test takes and some vague idea it is compute bound or not. powerpc-ibm-aix5.x: Change $RUNPARALLEL default setting to allow it being invoked by the time command. Platforms tested: h5committested.
* [svn-r11421] Purpose:James Laird2005-09-161-4/+11
| | | | | | | | | | | | | | | Feature Description: Added H5_CFLAGS, etc. to 1.7 branch. Now compilation flags can be put in H5_*FLAGS and they'll be used when building hdf5 but not in h5cc. Platforms tested: mir, sleipnir, modi4 Misc. update:
* [svn-r11420] Purpose:James Laird2005-09-161-0/+2
| | | | | | | | | | | | | | | | | Bug fix Description: Disabled C++ shared libraries for Sun Workshop compiler. Solution: This bug only seems to happen when using the -xarch=v9 flag to compile in 64-bit mode, but disabling shared libraries entirely for this compiler is an easier fix (I don't know how to detect 64 bit mode from the command line). The framework for disabling shared libraries for other C++ compilers is in place. Platforms tested: sol, mir, sleipnir, modi4
* [svn-r11418] Purpose:James Laird2005-09-151-2/+4
| | | | | | | | | | | | | | | | Bug fix/feature Description: Disabled shared libraries for a number of Fortran compilers that don't support them. This allows other compilers to support shared Fortran libraries. Solution: Added a conditional, SHARED_FORTRAN_CONDITIONAL, which is true if Fortran supports shared libraries. It is set in configure.in. Platforms tested: mir, sleipnir, colonelk, heping
* [svn-r11411] Purpose:James Laird2005-09-131-11/+12
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug fix Description: Building with --disable-static seems to have been broken on several platforms. Fixed this. Configure will now disable shared libraries automatically when using pgf90 or when building on Cygwin. Solution: To avoid errors when using shared libraries with pgf90 (which I had not realized were compiler-specific), I had manually set convenience libraries to use the -static linking flag. Apparently, this is not necessary, and caused these libraries to be created as empty archives when --disable-static was used. Also, some libraries were including other libraries, which was not necessary. I also fixed code in configure.in to correctly detect whether shared or static libraries are enabled, and moved code that disables shared libraries to before libtool is created (rather than editing libtool after the fact). Despite repeated warnings that only one shared library can be linked at a time, I have yet to have shared libraries break the linking of tests on any system. We'll see if the Daily Tests turn up anything. Platforms tested: mir (fortran, C++), sleipnir (C++), modi4 (fortran, C++, parallel), sol (fortran, C++), cygwin
* [svn-r11386] Purpose:Quincey Koziol2005-09-121-2/+3
| | | | | | | | | | | | | | Code cleanup/reorganization Description: Merge back some more changes extracted from the "compact group" set. This bunch cleans up and prepares the H5G_* routines for eventual import of new features. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Mac OS X.4
* [svn-r11361] Purpose:James Laird2005-09-071-1/+1
| | | | | | | | | | | | | | | | Bug fix Description: Cygwin was failing (seemingly only when I built in parallel) when it couldn't find or build H5detect. Fixed a dependency. Solution: H5init.c was depending on H5detect instead of H5detect$(EXEEXT). On Cygwin, applications end in .exe ! Platforms tested: mir, cygwin (finrod)
* [svn-r11341] James Laird2005-09-021-0/+4
| | | | | | | | | | | | | | Purpose: Bug fix Description: H5Tinit.c wasn't being cleaned properly. Solution: Clean H5Tinit.c. Platforms tested: sleipnir only (very minor change)
* [svn-r11323] Purpose:Albert Cheng2005-08-311-1/+2
| | | | | | | | | | | | | | | | tidy up. Description: MPE option created *.clog file whenever it is executed in MPI. The cleanup of *.clog files were done in individual Makefile.in. Often, it is forgotten. Solution: Moved the cleaning of *.clog files to CHECK_CLEANFILES in commence.am so that it is applied whenever check-clean is called. Platforms tested: heping pp using MPE.
* [svn-r11319] Purpose:James Laird2005-08-301-8/+1
| | | | | | | | | | | | | | | | | | | | | | | Bug fixes Description: This checkin fixes an occasional error on kelgia on sol during distclean. It also causes test scripts to depend properly on the programs they're supposed to be testing. Solution: The kelgia bug was due to some files being cleaned by automake and manually. Removed the manual cleaning in src/Makefile.am. Test script dependencies now need to be specified manually, since the makefile can't guess what they test from their name. Currently all test scripts in a given directory have a single list of dependencies--this was easy and seems to be sufficient. These dependencies are listed in the SCRIPT_DEPEND variable in the Makefile.am. Platforms tested: heping, mir, modi4, sol Misc. update:
* [svn-r11303] Purpose:Albert Cheng2005-08-261-25/+15
| | | | | | | | | | | | minor tidy up. Description: Changed both test programs and test scripts to use the same suffixes (.chkexe and .chklog). Changed from .log to .chklog to avoid running into potential conflicts by other "things" (e.g., config.log). Tested: Heping.
* [svn-r11215] Purpose:Quincey Koziol2005-08-081-20/+22
| | | | | | | | | | | | | Bug fix & code cleanup Description: Fix another bug in the file mounting code and refactor the unmount code that it is simpler. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 Too minor to require h5committest
* [svn-r11213] Purpose:Albert Cheng2005-08-081-7/+2
| | | | | | | | | | | | | | | | | | | Bug fix and improvement. Description: The test output were not displayed for parallel tests. The serial tests output were always displayed whether the test was actually ran this time or not. Solution: Moved the display of test output inside the target where the actual tests are run. Platforms tested: Tested in heping using pp and fortran.
* [svn-r11208] Purpose:Albert Cheng2005-08-081-55/+63
| | | | | | | | | | | | | | | | | | | Bug fix and code minor cleanup. Description: The attempt to redirect stderr together to the log files were done in the wrong order such that stderr output goes to where stdout WAS. Fixed that. Code minor cleanup--use shell variables to hold the name of the log file and the test instead of generating them repeatedly. This makes easier code reading, less crowded and avoid typos. Only conclude.in is changed. The Makefile.in changes are all derived from automake. Platforms tested: h5committested.
* [svn-r11204] Snapshot version 1.7 release 50HDF Admin2005-08-071-1/+1
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* [svn-r11185] Purpose:James Laird2005-08-021-9/+11
| | | | | | | | | | | | | | | Makefile feature Description: 'make check-clean' now cleans *.h5 files created by tests as well as .log and .chkexe files. Solution: check-clean is now a separate target in its own right, which cleans less than mostlyclean (check-clean < mostlyclean < clean < distclean). Platforms tested: mir, heping, modi4 (serial and parallel)
* [svn-r11179] Purpose:James Laird2005-08-011-8/+16
| | | | | | | | | | | | | | | | | | | Feature: check-clean target Description: 'make check-clean' cleans up output files from tests. Solution: Tests create foo.chkexe and foo.log files. Scripts create foo.chksh and foo.logsh files. 'make check-clean' will clean these files up so that the tests can be re-run. Also suppressed some not-very-useful output of Makefiles when it would echo commands. Platforms tested: mir, sleipnir, modi4 Misc. update:
* [svn-r11148] Snapshot version 1.7 release 49HDF Admin2005-07-241-1/+1
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* [svn-r11095] Purpose:James Laird2005-07-211-16/+53
| | | | | | | | | | | | | | | | | | | | | | Configuration feature Description: Serial test output is now stored in log files and printed when all tests in a directory complete, or when a test fails. This should make test output more readable and useful. Also made changes to clean up ii_files directories that are created by some C++ compilers/linkers. Also fixed a few minor Makefile bugs. Solution: When serial tests run, their output is saved in *.log or *.logsh. While running, tests only print when they begin and when they complete; their more specific output (from the log file) is printed if the test fails or when all tests have completed. Comments welcome. Platforms tested: mir, modi4 (parallel and serial), copper, shanti
* [svn-r11081] Snapshot version 1.7 release 48HDF Admin2005-07-181-1/+1
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* [svn-r11042] Purpose:Quincey Koziol2005-07-071-7/+7
| | | | | | | | | | | | | | | | | | Bug fix Description: The ".chksh" file for a test script was being created in the "source" location rather than the build location. This can cause problems when multiple builds are running because "slower" machines will see the ".cshsh" file from faster machines and will not run the test script as they should. Solution: Use 'basename' command to strip off the path of the script and create the ".chksh" file in the build location. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11034] Purpose:Albert Cheng2005-07-071-4/+2
| | | | | | | | | | | | | | | | | bug fix. Description: -nt is not a universal option for the test command in all platforms. The use of it in conclude.am cause some platforms to bark at the Makefile generated. Solution: Created a command script bin/newer which tests if file1 is newer than file2. Replace the "test file1 -nt file2" by "newer file1 file2". Platforms tested: Tested in sol.
* [svn-r11031] Purpose:Quincey Koziol2005-07-061-4/+10
| | | | | | | | | | | | | New feature Description: Initial checkin of B+ Tree code. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest Misc. update:
* [svn-r11022] Purpose:Quincey Koziol2005-07-051-5/+7
| | | | | | | | | | | | | | | | | | | | Bug fix & code cleanup Description: Don't unmount child files from a parent file if the parent file is being held open by an object. Also, moved the mounting routines into their own source file and the superblock routines into their own file also. Solution: Moved the code for unmounting child files down in the H5F_close routine and also add checks to the file and group mounting code to unmount child files when the last object holding open a file closes. Platforms tested: FreeBSD 4.11 (sleipnir) h5committest
* [svn-r11013] Purpose:James Laird2005-07-011-7/+7
| | | | | | | | | | | | | | | | | | Bug fix Description: Fixed bugs that caused tests to be unable to find testhdf5.sh during daily tests, and another that broke sol and shanti. Solution: When tests are run, their path is ./$testname . When scripts are run, their path has no leading "./". Fixed. Sol and shanti don't recognize the -e option for test, but they do know -f. Fixed. Also modified release notes. Platforms tested: mir, shanti, heping
* [svn-r11008] Purpose:James Laird2005-06-301-90/+83
| | | | | | | | | | | | | | | | | | | | | | Feature: tests now use parallel make and only run once Description: When make is invoked in parallel (using the -j option), several tests will now be run simultaneously. This should speed up testing on a number of systems. When a test passes, it creates a foo.chkexe or foo.chksh file, which prevents the test from running again unless the test or library changes. Solution: Most of the changes live in config/conclude.am. Added *.chkexe and *.chksh files to the list of files to be cleaned at "make mostlyclean" time. Parallel tests still run one at a time, but use the same make instructions as serial tests. Platforms tested: mir, eirene, sleipnir, pommier, copper, modi4 (some errors occurred, probably due to the test being run before updating hdf5. Will re-run tests after checkin.)
* [svn-r10958] Purpose:Quincey Koziol2005-06-201-10/+12
| | | | | | | | | | | | | New feature Description: Add group creation & access property lists, dataset access property lists and named datatype creation & access property lists. Currently have <foo>_extend() API names, which will need to be changed for the final release. Platforms tested: FreeBSD 4.11 (sleipnir) Linux 2.4 (heping)
* [svn-r10858] Purpose:Albert Cheng2005-06-041-4/+15
| | | | | | | | | | | bug fix. Description: The check-s and check-p targets are not recursively passes down. Make them so. Platforms tested: heping (serial and pp).
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