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* Misc clang production warning fixes (#1932)Dana Robinson2022-07-271-22/+23
| | | | | | | * Misc clang production warning fixes * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Develop clang 13 format (#1933)Allen Byrne2022-07-261-8/+8
| | | | | * Update format source to clang 13 * More format changes
* Updates uthash and makes some tweaks (#1928)Dana Robinson2022-07-251-59/+37
| | | | | | | | | | | * Updates uthash from 2.1.0 to 2.3.0 * Moves uthash include and related to H5private.h * Defines HASH_NONFATAL_OOM so that out-of-memory doesn't abort() * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* OESS-168: Remove clang warnings. (#1124)H. Joe Lee2021-11-051-10/+20
| | | | | | | | | | | * OESS-168: Remove clang warnings. * OESS-168: Remove clang warnings. * Committing clang-format changes * OESS-168: Address @derobins review for FALLTHROUGH. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Hash table replacement for skip lists in ID code (#600)Dana Robinson2021-05-041-0/+1184
| | | | | | | | | | | | | | | | | | | | | | | | | | * Committing clang-format changes * Brings over hash table code from Bitbucket * Can be switched between skip list and hash table implementation with H5_USE_ID_HASH_TABLE #define * Not yet updated to use iterate-safe delete * Fixes a warning and changes where the problematic test is commented out. * Adds mark-and-sweep flags and members * Final fixes for hash table ID code * Removes skip list ID code * Committing clang-format changes * Formatted source * Adds a comment about the mark-and-sweep scheme. Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Revert "Switch ID code to use a hash table instead of a skip list (#52)" (#104)Dana Robinson2020-11-201-1150/+0
| | | This reverts commit a50d211755cb272b2e468144e7d892a4c90813c4.
* Switch ID code to use a hash table instead of a skip list (#52)Dana Robinson2020-11-171-0/+1150
* Brings hash table ID code over from Bitbucket branch * Includes reformatting via clang. * Excludes uthash.h from reformatting. * Still has the failing test issue in tid.c. This should only be a problem if a custom ID type is used and its free function deletes other IDs. * Fixes munged H5_GCC_DIAG_ON/OFF macros in H5I.c The H5_GCC_DIAG_ON/OFF macros used to turn off fallthrough warnings in uthash.h (external code) were munged when formatting with clang due to their lack of quotes. e.g.; H5_GCC_DIAG_OFF(implicit-fallthrough) was munged to: H5_GCC_DIAG_OFF(implicit - fallthrough) which compiles, but is useless. So, with quotes, this is now: H5_GCC_DIAG_OFF("implicit-fallthrough") which survives reformatting with clang. * Fixes issues with user callbacks in the ID hash tables The skip lists (previously) used to handle IDs use a mark-and-sweep scheme to deal with user-defined ID delete callbacks which themselves delete other IDs in the list. The uthash hash table implementation used to manage the IDs in this feature branch does not have this ability. This commit restores the skip lists for non-library ID types in lieu of significantly modifying the uthash code. The hash tables are used to manage the library IDs as those do not delete other IDs when they are closed. * Adds uthash.h to MANIFEST * Removes implicit-fallthrough diagnostic disable Removing -Wimplicit-fallthrough=5 means that the uthash code no longer raises warnings so the H5_GCC_DIAG_OFF/ON macros that disabled those warnings have been removed from H5I.c. * Adds a test to ensure you can delete IDs in the H5Iiterate() callback