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* [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk.Scot Breitenfeld2015-08-113-6/+77
| | | | Tested: h5committest --PASSED--
* [svn-r27489] reverted merge of branchScot Breitenfeld2015-08-113-77/+6
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* [svn-r27470] svn merge -r27425:27460 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-08-055-869/+866
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| * [svn-r27459] Merge of 27411 from revise_chunks.Dana Robinson2015-08-044-19/+19
| | | | | | | | | | | | | | | | | | Renamed a few "h5tri_t extended" variables to "h5tri_t was_extended". Apparently, "extended" is a typedef name someplace in the headers used on Solaris, which causes potentially confusing warnings to be emitted. Tested on: h5committest Solaris w/ Solaris Studio (emu)
| * [svn-r27432] Snapshot version 1.9 release 226HDF Tester2015-07-272-3/+3
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| * [svn-r27428] Bug fix: DAILYTEST-170Albert Cheng2015-07-244-0/+60
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: XL compilers in ostrich (PowerPC64 linux) fail in test/dt_arith because of the removal of the LLONG_TO_LDOUBLE_CORRECT (removed in r26625) and LDOUBLE_TO_LLONG_ACCURATE (removed in r26623). Solution: Reverse revisions r26623: bring back LDOUBLE_TO_LLONG_ACCURATE configure macro r26625: bring back LLONG_TO_LDOUBLE_CORRECT configure macro r26627: bring back WANT_DATA_ACCURACY configure macro which is used together with the above two macros. This also brings back the enable-dconv-accuracy configure option. Tested: h5committested. Also tested in ostrich using the XL compilers.
| * [svn-r27427] - free comm keyval after setting atribute on comm_selfMohamad Chaarawi2015-07-231-0/+3
| | | | | | | | | | | | - free allocated buffer in t_file_image test tested on jam with parallel.
* | [svn-r27469] Merge from trunk with dual-binary CMake code.Allen Byrne2015-08-0517-900/+995
| | | | | | | | Tested: local linux with CMake
* | [svn-r27426] svn merge -r27377:27425 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-07-227-222/+541
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| * [svn-r27415] Fix potential error with H5I_clear_type which could occur when ↵Neil Fortner2015-07-203-217/+533
| | | | | | | | | | | | | | | | | | | | | | a callback closed a different ID in the same type. Added a new skiplist routine, H5SL_try_free_safe, which iterates over items, freeing some of them, and which intercepts and defers attempts to remove from the list outside of the main iteration. Changed H5I_clear_type to use this function. Tested: jam, koala, ostrich (h5committest); ummon
| * [svn-r27412] Snapshot version 1.9 release 225HDF Tester2015-07-202-3/+3
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| * [svn-r27407] Updated the H5_ATTR_* macros.Dana Robinson2015-07-182-2/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | - Updated the preprocessor logic that defines the H5_ATTR_* macros. The Solaris Studio compiler understands __attribute__ but not the specific attributes that we use. The H5_ATTR_* macros are now defined as blank with that compiler which significantly cleans up the warnings, making debugging easier. - Replaced a few lingering __attribute__ macros with H5_ATTR_* markup. Tested on: h5committest Solaris w/ Solaris Studio (emu)
* | [svn-r27378] svn merge -r27326:27377 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-07-143-4/+5
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| * [svn-r27372] Snapshot version 1.9 release 224HDF Tester2015-07-132-3/+3
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| * [svn-r27364] Add Mac Framework supportAllen Byrne2015-07-091-1/+2
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* | [svn-r27357] svn merge -r27208:27356 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-07-092-3/+3
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| * [svn-r27339] Snapshot version 1.9 release 223HDF Tester2015-07-062-28/+31
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* | [svn-r27334] svn merge -r27326:27332 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-07-021-0/+2
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| * [svn-r27332] Fix src/CMakeLists.txt after Quincey's metadata cache changesJerome Soumagne2015-07-021-0/+2
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* | [svn-r27328] updated reconfigureScot Breitenfeld2015-07-021-25/+28
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* | [svn-r27327] svn merge -r27208:27326 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-07-0290-11602/+14837
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| * [svn-r27320] Fix uninitialized memory write valgrind errors in trunk. Did ↵Neil Fortner2015-07-018-16/+46
| | | | | | | | | | | | | | | | this by modifying metadata cache clients to clear unused memory in the buffer after serializing. Tested: ummon; jam, koala, ostrich (h5committest)
| * [svn-r27298] Description:Quincey Koziol2015-06-295-134/+159
| | | | | | | | | | | | | | | | | | Separate H5AC layer from using package-scoped pieces of the H5C layer, moving from including H5Cpkg.h to H5Cprivate.h. Tested on: MacOSX/64 10.10.3 (amazon) w/serial, parallel & production Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27296] Description:Quincey Koziol2015-06-294-18/+17
| | | | | | | | | | | | | | | | | | Correct error with braces around macro (in production builds), also clean up a few warnings. Tested on: MacOSX/64 10.10.3 (amazon) w/serial, parallel & production Linux/32 2.6 (jam) w/serial & parallel
| * [svn-r27294] Description:Quincey Koziol2015-06-295-707/+316
| | | | | | | | | | | | | | | | | | | | Clean up parameters to H5C__flush_single_entry: accept cache entry instead of address, and make new flag for deleting entry from skiplist on destroy instead of a separate parameter to the routine. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27293] Description:Quincey Koziol2015-06-279-3506/+3658
| | | | | | | | | | | | | | | | Split parallel metadata cache code into separate source code modules. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (too minor for h5committest)
| * [svn-r27292] Description:Quincey Koziol2015-06-273-12/+16
| | | | | | | | | | | | | | | | | | | | Bring 'fail if unknown always' object header message flag from the avoid_truncate branch, strengthen error checking for unknown messages, and try to catch object header code configurations at compile time (instead of runtime). Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r27278] Merge of 27270 from trunk. Fixes HDFFV-9119 and HDFFV-9421.Dana Robinson2015-06-244-31/+45
| | | | | | | | | | | | | | | | | | | | | | | | | | Changes that allow the autotools to correctly deal with inline functions. - Inline markup schemes are now checked with AC_COMPILE_IFELSE tests instead of AC_C_INLINE. - The inline designator is now H5_INLINE instead of H5_inline. This is now set in H5private.h instead of H5pubconf.h. Tested on: h5committest
| * [svn-r27262] Snapshot version 1.9 release 222HDF Tester2015-06-222-3/+3
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| * [svn-r27243] fix problem with encoding/decoding external fapl for lapls.Mohamad Chaarawi2015-06-181-17/+33
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| * [svn-r27237] Description:Quincey Koziol2015-06-1880-8004/+11390
| | | | | | | | | | | | | | | | | | Merge v3 metadata cache changes to trunk. Yay! :-) Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (daily tested on branch)
* | [svn-r27228] restricted __float128 to gnu compilersScot Breitenfeld2015-06-171-0/+3
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* | [svn-r27225] new test for __float128Scot Breitenfeld2015-06-171-1/+1
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* | [svn-r27223] Added check for quadmath.hScot Breitenfeld2015-06-171-0/+3
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* | [svn-r27221] Reworked Fortran autools REAL KIND detection.Scot Breitenfeld2015-06-162-0/+23
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* | [svn-r27209] svn merge -r27186:27208 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-06-169-3417/+2442
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| * [svn-r27207] use "closing" flag instead of always TRUE in the truncate call.Mohamad Chaarawi2015-06-151-1/+1
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| * [svn-r27206] fix for HDFFV-9418. Mohamad Chaarawi2015-06-151-8/+9
| | | | | | | | | | | | | | - Moving truncate to H5F_flush() where it was done a long time ago. - Add a second H5AC_flush() call after the truncate is done to make sure we write the correct EOA. tested with h5committest
| * [svn-r27204] Description:Quincey Koziol2015-06-153-1440/+1270
| | | | | | | | | | | | | | | | | | Clean up compiler warnings before merging in v3 metadata cache changes from branch. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27199] Description:Quincey Koziol2015-06-135-1966/+1159
| | | | | | | | | | | | | | | | | | Large code cleanups and optimizations, in preparation for the upcoming v3 metadata cache merge. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27198] Set "entire_chunk" to false in H5D__chunk_write() for point ↵Vailin Choi2015-06-122-4/+5
| | | | | | | | | | | | selection as duplicate points are not checked to determine that it is really an "entire chunk". The bug appears from running the mdset.c test. This is a short-term fix for the problem.
* | [svn-r27187] svn merge -r27135:27186 https://svn.hdfgroup.uiuc.edu/hdf5/trunkScot Breitenfeld2015-06-1038-493/+640
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| * [svn-r27185] fix more instances where both mpi is_initialized and ↵Mohamad Chaarawi2015-06-101-4/+8
| | | | | | | | | | | | is_finalized need to be checked before making any MPI calls. tested with h5committest.
| * [svn-r27162] fix for HDFFV-9412:Mohamad Chaarawi2015-06-081-11/+15
| | | | | | | | | | | | | | - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
| * [svn-r27159] Snapshot version 1.9 release 221HDF Tester2015-06-082-3/+3
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| * [svn-r27144] Description:Quincey Koziol2015-06-0334-475/+614
| | | | | | | | | | | | | | | | | | | | Normalize trunk against the metadata_cache_merge branch, in preparation for merging the branch into the trunk. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/64 2.6.x (koala) w/serial Linux/32 2.6.x (jam) w/serial & parallel
* | [svn-r27186] added fix for jam with promoted reals and integersScot Breitenfeld2015-06-101-0/+1
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* | [svn-r27167] more DT fixesScot Breitenfeld2015-06-092-0/+4
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* | [svn-r27164] various bug fixes for DTScot Breitenfeld2015-06-082-0/+4
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* | [svn-r27154] fixed issue with mis-matching long double between Fortran and CScot Breitenfeld2015-06-052-0/+4
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