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* Merge pull request #1873 in HDFFV/hdf5 from ↵Dana Robinson2019-08-159-484/+566
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:H5Pset_fapl_mpi to develop * commit 'bd8da502cf5b763433e3c628a4043a4264529cec': Some refactoring prior to implementing new H5P MPI functions. * Macro cleanup and obvious warning fixes in parallel code. * Moved H5FD comm and info dup/free wrapper code to a new H5mpi.c file and separated it to deal with each MPI type separately.
| * Some refactoring prior to implementing new H5P MPI functions.Dana Robinson2019-08-149-484/+566
| | | | | | | | | | | | * Macro cleanup and obvious warning fixes in parallel code. * Moved H5FD comm and info dup/free wrapper code to a new H5mpi.c file and separated it to deal with each MPI type separately.
* | Merge pull request #1874 in HDFFV/hdf5 from ↵Dana Robinson2019-08-153-0/+82
|\ \ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5s_api_for_daos to develop * commit 'c490fefbc3199d45fa4d3af09dd567671a244e8d': Added public H5Sselect_adjust_u and H5Shyper_adjust_s calls.
| * | Added public H5Sselect_adjust_u and H5Shyper_adjust_s calls.Dana Robinson2019-08-153-0/+82
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* | | Merge pull request #1869 in HDFFV/hdf5 from ↵Jerome Soumagne2019-08-155-9/+10
|\ \ \ | |/ / |/| | | | | | | | | | | | | | ~JSOUMAGNE/hdf5:topic_file_get_id to develop * commit '7f5a5020c8ec882e6b7eceab878470003e2a8b63': Fix H5F_get_file_id and H5F__get_file_id to take app_ref parameter
| * | Fix H5F_get_file_id and H5F__get_file_id to take app_ref parameterJerome Soumagne2019-08-145-9/+10
| |/ | | | | | | Fix app_ref_count from being incremented when private routines are used
* | Fix compiler warnings with diabled ROS3 and HDFS VFDs.Jacob Smith2019-08-144-709/+1032
|/ | | | | | Fix misuse of [HD]strncpy and [HD]snprintf. Minor formatting changes. Fix test cleanup issue with java groups example.
* Added map API build status to libhdf5.settings.Dana Robinson2019-08-141-0/+1
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* Merge pull request #1860 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:map_api_merge ↵Dana Robinson2019-08-1335-12/+1900
|\ | | | | | | | | | | | | | | | | | | to develop * commit 'd95745235a468b17f697843adb3d0e54bd919893': Updated h5trav.c to emit output that doesn't require ddl changes for map support. Fixed Map API CMake option Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput. Added the map (H5M) API
| * Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput.Dana Robinson2019-08-132-17/+17
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| * Added the map (H5M) APIDana Robinson2019-08-1335-12/+1900
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* | Added ifdef for intel compilers, __GNUC__ has to be defined for header files ↵M. Scot Breitenfeld2019-08-131-1/+1
|/ | | | which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers.
* Added gcc conditional for __attribute__((fallthrough)), removes 34 warnings ↵M. Scot Breitenfeld2019-08-081-0/+4
| | | | on theta (10% of warnings).
* Fix return type for H5Sselect_intersect_block().Quincey Koziol2019-07-311-1/+1
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* Updated H5TRACE macro.Quincey Koziol2019-07-301-0/+1
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~koziol/hdf5 ↵Quincey Koziol2019-07-3010-12/+8575
|\ | | | | | | into develop
| * Update comment and check for strtoumax.Larry Knox2019-07-261-3/+2
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| * Add HD to string functions.Larry Knox2019-07-264-53/+58
| | | | | | | | | | | | Switched strtoul to strtoumax in H5FDs3comms.c. Removed unused functions and variables in s3 and hdfs TestH5Pfapl*.java. Update Copyright headers.
| * Squashed commit of the following:Larry Knox2019-07-2510-12/+8571
| | | | | | | | | | | | | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* | Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, alongQuincey Koziol2019-07-3013-152/+399
|/ | | | with tests and minor cleanups and refactorings.
* HDFFV-10845 update mingw cmake changesAllen Byrne2019-07-171-7/+5
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* HDFFV-10845 add_custom_command requires emulatorAllen Byrne2019-07-171-2/+2
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* HDFFV-8631, HDFFV-10595, HDFFV-10845Allen Byrne2019-07-171-1/+5
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* HDFFV-8631 mingw is different platformAllen Byrne2019-07-171-2/+2
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* HDFFV-10845 add support for mingw toolchainAllen Byrne2019-07-171-2/+2
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* H5P: Fix wrong value comparison in assertJerome Soumagne2019-07-161-3/+5
| | | | Move compile assert of H5P_plist_type to H5P__init_package()
* Reverted snprintf to sprintf in the multi VFD sinceDana Robinson2019-07-111-12/+12
| | | | the former causes problems on Windows.
* Revert path processing to fix daily test errors.Dana Robinson2019-07-101-1/+1
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* Merge branch 'develop' into feature/update_gcc_flagsQuincey Koziol2019-07-101-1/+1
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| * HDFFV-10581 fix locations for static pdb filesAllen Byrne2019-07-081-1/+1
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* | Updates to warnhist script, along with a few cleanups, and add some commentsQuincey Koziol2019-07-106-7/+25
| | | | | | | | to warning cleanups that are a bit obscure.
* | Merge branch 'develop' into feature/update_gcc_flagsQuincey Koziol2019-07-031-1/+1
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| * Fixed libhdf5 settings file for both autotools & CMakeDhvanil Popat2019-06-251-1/+1
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* | Add support for GCC9, update warnhist script, and clean up warnings.Quincey Koziol2019-07-0315-80/+93
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* Merge pull request #1787 in HDFFV/hdf5 from ↵Dana Robinson2019-07-023-5/+11
|\ | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_minor_pr to develop * commit 'f250815151df8da8a93c0ff781a3cf134f1c6cbd': Cleaned up misc warnings.
| * Cleaned up misc warnings.Dana Robinson2019-06-293-5/+11
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* | Move the -Wformat-nonliteral warning to the developer flags. Fix bugsQuincey Koziol2019-06-291-1/+1
| | | | | | | | I introduced in the last commit.
* | Merge branch 'develop' into feature/update_gcc_flagsQuincey Koziol2019-06-2818-855/+565
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| * Merge pull request #1781 in HDFFV/hdf5 from ↵Dana Robinson2019-06-283-57/+93
| |\ | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_minor_pr to develop * commit 'f83d034105e2c72210dd41723044acca37a6d735': Refactored some fsinfo code from H5Fsuper.c to H5Ofsinfo.c.
| | * Refactored some fsinfo code from H5Fsuper.c to H5Ofsinfo.c.Dana Robinson2019-06-273-57/+93
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| * | Merge pull request #1782 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:warning_fixes ↵Dana Robinson2019-06-282-4/+3
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '1c4101c6a77dd9223483dd9e3f7bec0f9e92f435': Fixed various warnings in testhdf5 files. Warning fixes: * fix for static/const flipped in H5Dint.c * Removed missing done target in H5Rint.c * Fixed misleading indentation in h5format_convert.c
| | * | Warning fixes:Dana Robinson2019-06-282-4/+3
| | |/ | | | | | | | | | | | | | | | * fix for static/const flipped in H5Dint.c * Removed missing done target in H5Rint.c * Fixed misleading indentation in h5format_convert.c
| * | (1) Add/remove comments.Vailin Choi2019-06-274-191/+105
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | (2) A temporary fix to address the test/objcopy.c: test_copy_group_deep() test failure with the family driver. The test failure occurs with these configurations in objcopy.c: --with shared src messages (CONFIG_SHARE_SRC) --without shared dst messages (CONFIG_SHARE_DST) --with latest format for source file (CONFIG_SRC_NEW_FORMAT) --without dense attributes (CONFIG_DENSE) --with latest format for destination file (CONFIG_DST_NEW_FORMAT) The temporary fix is in src/H5MFaggr.c (see comments above #ifdef REPLACE/#endif).
| * | Merge branch 'develop' of ↵Vailin Choi2019-06-266-18/+97
| |\ \ | | |/ | | | | | | https://bitbucket.hdfgroup.org/scm/~vchoi/my_third_fork into bugfix/new_shutdown_fsm
| * | Merge pull request #8 in ~VCHOI/my_third_fork from develop to ↵Vailin Choi2019-06-2428-76/+123
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | bugfix/new_shutdown_fsm * commit '35fd0ec8ceffe96cee352187154da15c967fb990': Updated H5Tcopy() to get the dataset's datatype through the VOL when that is passed in as the object ID. Fix fortran test and test library linking Update GCC 6 & 7 flags for CMake builds Move -Wnormalized down into GCC 6.x flags Put the memcpy overlap check back into H5MM. Fixed the heap overflow in t_filters_parallel Fixed some low-hanging fruit from -fsanitize in t_filters_parallel. Add lib dir for testing plugins Add support for GCC 7.x warnings, update warnhist script to account for them, clean up warnings. Add H5_HLDLL prefix for windows link HDFFV-10805 cleanup examples and test code Fix minor typo in H5S_select_iter_release Add missing fortran mods HDFFV-10805 Fix test of library libinfo Cleanup possible CMake target conflicts Correct CMake issues
| * | | Checkin for new shutting down free-space manager.Vailin Choi2019-06-2015-619/+380
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* | | | Updated configure & CMake compiler flags for GCC 8.x, along with correspondingQuincey Koziol2019-06-2829-147/+172
| |_|/ |/| | | | | | | | | | | changes to warnhist script (and some extra improvements for condensing C++ and Java warnings), and fixed a bunch of warnings.
* | | Add release notes.Vailin Choi2019-06-251-2/+1
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* | | Merge branch 'bugfix/HDFFV-10808-h5pset_file_space_strategy-succeeds' of ↵Vailin Choi2019-06-241-12/+12
|\ \ \ | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~vchoi/my_third_fork into bugfix/HDFFV-10808-h5pset_file_space_strategy-succeeds
| * | | Move pragma statements outside of routines, to make older compilers happy.Quincey Koziol2019-06-241-12/+12
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