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* [svn-r27197] Improve performance of "printf" VDS with selections in the file ↵Neil Fortner2015-06-123-16/+60
| | | | | | | | | | space - the library no longer iterates over all source datasets in the printf mapping, it now only looks at the ones that could be involved in I/O (the ones whose bounds overlap with the selection in the unlimited dimension). Tested: ummon
* [svn-r27192] Improve support for printf selections (support partial blocks withNeil Fortner2015-06-127-253/+417
| | | | | | | | | | H5_VDS_FIRST_MISSING) Add test for this Rework VDS code to not depend on unlimited selections having a "clipped" state in preparation for removing the clipped state from unlimited selections. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
* [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-11149-1599/+1873
|\ | | | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| * [svn-r27185] fix more instances where both mpi is_initialized and ↵Mohamad Chaarawi2015-06-101-4/+8
| | | | | | | | | | | | is_finalized need to be checked before making any MPI calls. tested with h5committest.
| * [svn-r27162] fix for HDFFV-9412:Mohamad Chaarawi2015-06-081-11/+15
| | | | | | | | | | | | | | - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
| * [svn-r27159] Snapshot version 1.9 release 221HDF Tester2015-06-082-3/+3
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| * [svn-r27144] Description:Quincey Koziol2015-06-0334-475/+614
| | | | | | | | | | | | | | | | | | | | Normalize trunk against the metadata_cache_merge branch, in preparation for merging the branch into the trunk. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/64 2.6.x (koala) w/serial Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-01119-967/+980
| | | | | | | | | | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
| * [svn-r27130] Fix warnings in H5TconvJerome Soumagne2015-06-011-91/+132
| | | | | | | | | | | | Remove H5T_INIT_INTERFACE from H5Tconv Add macro in H5Tconv to check overflow when using H5T_CONV_uS
| * [svn-r27129] Fix warnings in H5TbitJerome Soumagne2015-06-011-5/+7
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| * [svn-r27128] Fix warnings in H5TdbgJerome Soumagne2015-06-011-2/+44
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| * [svn-r27127] Snapshot version 1.9 release 220HDF Tester2015-06-012-3/+3
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| * [svn-r27114] Fixed spelling and which file is created with the program.Scot Breitenfeld2015-05-271-1/+1
| | | | | | | | Tested: none -- comments only.
| * [svn-r27111] move undef of __attribute__ back to private and remove its ↵Mohamad Chaarawi2015-05-263-8/+3
| | | | | | | | usage from public routines.
| * [svn-r27110] Snapshot version 1.9 release 219HDF Tester2015-05-242-3/+3
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* | [svn-r27174] Fix bug in H5S__hyper_project_intersection that affected empty ↵Neil Fortner2015-06-091-5/+8
| | | | | | | | | | | | selections. Tested: ummon
* | [svn-r27155] Change H5Pget_virtual_view to return herr_t and take a pointer ↵Neil Fortner2015-06-052-9/+12
| | | | | | | | | | | | | | | | to the view as a parameter. Also fix bug in H5Pget_virtual_printf_gap. Tested: jam
* | [svn-r27153] Implement fill value support for VDS.Neil Fortner2015-06-056-131/+560
| | | | | | | | | | | | | | | | | | Add testing for this. Fix bug in printf string parsing. Add test for this. Other minor fixes/cleanup. Tested: ummon
* | [svn-r27152] Updated bin/trace and src/H5trace.c to handle the H5D_vds_view_tDana Robinson2015-06-042-0/+34
| | | | | | | | | | | | enum type. Tested on: jam
* | [svn-r27145] Add some testing for printf-style source dataset name resolution.Neil Fortner2015-06-036-258/+261
| | | | | | | | | | | | | | Various bug fixes, including a temporary fix for printf with FIRST_MISSING view. Other cleanup. Tested: ummon
* | [svn-r27104] Add support for printf-style source dataset name resolution.Neil Fortner2015-05-2210-401/+1356
| | | | | | | | | | | | | | | | Passes use case test, no regression tests yet. Add functions H5Pset/get_virtual_printf_gap (not tested yet). Other minor fixes/cleanup. Tested: ummon
* | [svn-r27103] Merge revisions 26780 through 27102 from trunk to vds branch.Neil Fortner2015-05-21112-3278/+3551
|\ \ | |/ | | | | Tested: ummon
| * [svn-r27092] Snapshot version 1.9 release 218HDF Tester2015-05-172-3/+3
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| * [svn-r27089] move private functions from H5A.c to H5Aint.cMohamad Chaarawi2015-05-153-266/+266
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| * [svn-r27084] Description:Quincey Koziol2015-05-151-2/+2
| | | | | | | | | | | | | | | | Clean up cache tests, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27083] Description:Quincey Koziol2015-05-151-13/+22
| | | | | | | | | | | | | | | | Clean up H5SM interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27082] Description:Quincey Koziol2015-05-152-69/+61
| | | | | | | | | | | | | | | | Clean up H5O interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27081] Description:Quincey Koziol2015-05-152-24/+25
| | | | | | | | | | | | | | | | Clean up H5HL interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27080] Description:Quincey Koziol2015-05-151-595/+355
| | | | | | | | | | | | | | | | Clean up H5HF interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27079] Description:Quincey Koziol2015-05-151-8/+8
| | | | | | | | | | | | | | | | Clean up H5G interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27078] Description:Quincey Koziol2015-05-153-22/+20
| | | | | | | | | | | | | | | | Clean up H5FS interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27077] Description:Quincey Koziol2015-05-154-46/+67
| | | | | | | | | | | | | | | | Clean up H5FD interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27076] Description:Quincey Koziol2015-05-156-48/+107
| | | | | | | | | | | | | | | | Clean up H5FA interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27075] Description:Quincey Koziol2015-05-156-35/+46
| | | | | | | | | | | | | | | | Clean up H5F interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27074] Description:Quincey Koziol2015-05-155-56/+101
| | | | | | | | | | | | | | | | Clean up H5EA interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27073] Description:Quincey Koziol2015-05-152-4/+4
| | | | | | | | | | | | | | | | Clean up H5D interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27072] Description:Quincey Koziol2015-05-154-318/+203
| | | | | | | | | | | | | | | | Clean up H5B interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27071] Description:Quincey Koziol2015-05-158-479/+482
| | | | | | | | | | | | | | | | Clean up H5B2 interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux 2.6.* (jam) w/serial & parallel
| * [svn-r27070] Description:Quincey Koziol2015-05-154-64/+65
| | | | | | | | | | | | | | | | | | Clean up the H5B interface code, to better align with v3 metadata cache changes. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27068] Description:Quincey Koziol2015-05-155-370/+370
| | | | | | | | | | | | | | | | | | Clean up the H5A interface code, to better align with v3 metadata cache changes. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27058] Description:Quincey Koziol2015-05-1311-282/+495
| | | | | | | | | | | | | | | | | | | | Convert internal chunk structures to use 'scaled' coordinates instead of absolute coordinates. Tested on: Mac OSX/64 10.10.3 (amazon) w/parallel & serial Linux 2.6.x/32 (jam) w/parallel & serial Linux 2.6.x/64 (koala) w/serial
| * [svn-r27045] Renamed H5_ASSIGN_OVERFLOW() to H5_CHECKED_ASSIGN() and re-orderedDana Robinson2015-05-1051-150/+171
| | | | | | | | | | | | the arguments to be in a more logical order. Tested on: h5committest
| * [svn-r27040] Moved '*' in H5PLget_loading_state() so that bin/trace would ↵Dana Robinson2015-05-082-2/+3
| | | | | | | | | | | | | | | | correctly process it and ran bin/trace. Tested on: h5committest
| * [svn-r27031] Fix warnings in H5detect and clean up code, use unsigned variablesJerome Soumagne2015-05-061-149/+152
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Use H5_GCC_DIAG_ON/OFF to suppress larger-than and float-equal warnings Variables used with sigsetjmp/siglongjmp must be declared as volatile Remove unnecessary use of volatile after r24171 fix and fix prototypes Tested in release mode on: - jam (CentOS 5.11 i386 GCC 4.1.2) - ostrich (RHEL 6.6 ppc64 GCC 4.4.7) - local linux (OpenSuSE 13.2 x86_64 GCC 4.8.3) - local linux (Fedora 21 x86_64 GCC 4.9.2) - local linux (Fedora 21 x86_64 ICC 15.0.2) - local windows (Windows 8.1 x86_64 MSVC 2013 update 4) - lemur (MacOSX 10.10.3 x86_64 clang-602.0.49 Xcode 6.3.1) - ibm p95a07 (Ubuntu 14.10 ppc64le GCC 4.9.1) - ibm p95a07 (Ubuntu 14.10 ppc64le IBM XL C V13.1.1) - bluewaters (Cray PE 2.2.1 x86_64 GCC 4.8.2) - bluewaters (Cray PE 2.2.1 x86_64 Cray C 8.3.3) - bluewaters (Cray PE 2.2.1 x86_64 PGCC 14.2)
| * [svn-r27029] Fix bad comment in H5detect, this was preventing PGCC from ↵Jerome Soumagne2015-05-061-1/+1
| | | | | | | | | | | | compiling correctly. Tested on: bluewaters
| * [svn-r27009] Fix mismatching prototypes in H5FD/H5B2Jerome Soumagne2015-05-043-6/+6
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| * [svn-r26997] Snapshot version 1.9 release 217HDF Tester2015-05-032-3/+3
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| * [svn-r26996] Description:Quincey Koziol2015-05-022-11/+1
| | | | | | | | | | | | | | | | Eliminate unneccessary 'rdcc' field from common chunk info struct. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5commitest)
| * [svn-r26995] Description:Quincey Koziol2015-05-022-27/+33
| | | | | | | | | | | | | | | | | | | | Clean up chunk 'prune by extent' and flush code, and make the rehashing routine 'update cache' hold onto more chunks, instead of evicting them as aggressively. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r26993] Description:Quincey Koziol2015-05-025-45/+100
| | | | | | | | | | | | | | | | | | Align w/incoming chunk performance changes, including some small performance improvements here, as well as a few minor general code cleanups. Tested on: Mac OSX/64 10.10.3 (amazon) w/serial & parallel (Too minor to require h5committest)
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