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* [svn-r27246] Remove "clipped" status from unlimited selections, decoupling ↵Neil Fortner2015-06-187-330/+289
| | | | | | | | | | | them from the extent. Improve algorithm for calculation of VDS extent by removing the need for a temporary copy of a dataspace. Other minor fixes/cleanup. Tested: ummon
* [svn-r27224] Fix bug that prevented reading from datasets with unlimited ↵Neil Fortner2015-06-171-31/+41
| | | | | | | | | | mappings with missing source datasets. Decided not to attempt to open the source dataset in this case, as doing so could create issues related to the sizing of the VDS. Users should call H5Dget_space to open these datasets. No regression test yet. Tested: ummon
* [svn-r27215] Fix issue where % characters could not be used in non-printf ↵Neil Fortner2015-06-164-57/+144
| | | | | | | | mappings. Other minor fixes/cleanup. Tested: ummon
* [svn-r27214] Fixed a bug on Windows where dcpls were set to be chunked and ↵Dana Robinson2015-06-161-1/+1
| | | | | | | | not virtual. This was due to a simple copy-paste issue in the initializer that is used when C99 initializers are not available. Also fixed a dims array size error in the vds test. Tested on: 64-bit Win7 with VS2013
* [svn-r27197] Improve performance of "printf" VDS with selections in the file ↵Neil Fortner2015-06-123-16/+60
| | | | | | | | | | space - the library no longer iterates over all source datasets in the printf mapping, it now only looks at the ones that could be involved in I/O (the ones whose bounds overlap with the selection in the unlimited dimension). Tested: ummon
* [svn-r27192] Improve support for printf selections (support partial blocks withNeil Fortner2015-06-127-253/+417
| | | | | | | | | | H5_VDS_FIRST_MISSING) Add test for this Rework VDS code to not depend on unlimited selections having a "clipped" state in preparation for removing the clipped state from unlimited selections. Other bug fixes/cleanup Tested: Kubuntu 64 (home computer)
* [svn-r27191] Merged r26781 to r27185 from trunkDana Robinson2015-06-11149-1599/+1873
|\ | | | | | | | | Tested on: 64-bit Ubuntu Linux VM w/ gcc 4.8.2 (C++ and Fortran 2003 also tested)
| * [svn-r27185] fix more instances where both mpi is_initialized and ↵Mohamad Chaarawi2015-06-101-4/+8
| | | | | | | | | | | | is_finalized need to be checked before making any MPI calls. tested with h5committest.
| * [svn-r27162] fix for HDFFV-9412:Mohamad Chaarawi2015-06-081-11/+15
| | | | | | | | | | | | | | - Check for mpi is_initialized and is_finalized before making MPI calls in init/terminate of HDF5. - Add a test to make sure we can make serial HDF5 calls from rank 0 after MPI_Finalize is called. tested with h5committest
| * [svn-r27159] Snapshot version 1.9 release 221HDF Tester2015-06-082-3/+3
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| * [svn-r27144] Description:Quincey Koziol2015-06-0334-475/+614
| | | | | | | | | | | | | | | | | | | | Normalize trunk against the metadata_cache_merge branch, in preparation for merging the branch into the trunk. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/64 2.6.x (koala) w/serial Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-01119-967/+980
| | | | | | | | | | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
| * [svn-r27130] Fix warnings in H5TconvJerome Soumagne2015-06-011-91/+132
| | | | | | | | | | | | Remove H5T_INIT_INTERFACE from H5Tconv Add macro in H5Tconv to check overflow when using H5T_CONV_uS
| * [svn-r27129] Fix warnings in H5TbitJerome Soumagne2015-06-011-5/+7
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| * [svn-r27128] Fix warnings in H5TdbgJerome Soumagne2015-06-011-2/+44
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| * [svn-r27127] Snapshot version 1.9 release 220HDF Tester2015-06-012-3/+3
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| * [svn-r27114] Fixed spelling and which file is created with the program.Scot Breitenfeld2015-05-271-1/+1
| | | | | | | | Tested: none -- comments only.
| * [svn-r27111] move undef of __attribute__ back to private and remove its ↵Mohamad Chaarawi2015-05-263-8/+3
| | | | | | | | usage from public routines.
| * [svn-r27110] Snapshot version 1.9 release 219HDF Tester2015-05-242-3/+3
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* | [svn-r27174] Fix bug in H5S__hyper_project_intersection that affected empty ↵Neil Fortner2015-06-091-5/+8
| | | | | | | | | | | | selections. Tested: ummon
* | [svn-r27155] Change H5Pget_virtual_view to return herr_t and take a pointer ↵Neil Fortner2015-06-052-9/+12
| | | | | | | | | | | | | | | | to the view as a parameter. Also fix bug in H5Pget_virtual_printf_gap. Tested: jam
* | [svn-r27153] Implement fill value support for VDS.Neil Fortner2015-06-056-131/+560
| | | | | | | | | | | | | | | | | | Add testing for this. Fix bug in printf string parsing. Add test for this. Other minor fixes/cleanup. Tested: ummon
* | [svn-r27152] Updated bin/trace and src/H5trace.c to handle the H5D_vds_view_tDana Robinson2015-06-042-0/+34
| | | | | | | | | | | | enum type. Tested on: jam
* | [svn-r27145] Add some testing for printf-style source dataset name resolution.Neil Fortner2015-06-036-258/+261
| | | | | | | | | | | | | | Various bug fixes, including a temporary fix for printf with FIRST_MISSING view. Other cleanup. Tested: ummon
* | [svn-r27104] Add support for printf-style source dataset name resolution.Neil Fortner2015-05-2210-401/+1356
| | | | | | | | | | | | | | | | Passes use case test, no regression tests yet. Add functions H5Pset/get_virtual_printf_gap (not tested yet). Other minor fixes/cleanup. Tested: ummon
* | [svn-r27103] Merge revisions 26780 through 27102 from trunk to vds branch.Neil Fortner2015-05-21112-3278/+3551
|\ \ | |/ | | | | Tested: ummon
| * [svn-r27092] Snapshot version 1.9 release 218HDF Tester2015-05-172-3/+3
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| * [svn-r27089] move private functions from H5A.c to H5Aint.cMohamad Chaarawi2015-05-153-266/+266
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| * [svn-r27084] Description:Quincey Koziol2015-05-151-2/+2
| | | | | | | | | | | | | | | | Clean up cache tests, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27083] Description:Quincey Koziol2015-05-151-13/+22
| | | | | | | | | | | | | | | | Clean up H5SM interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27082] Description:Quincey Koziol2015-05-152-69/+61
| | | | | | | | | | | | | | | | Clean up H5O interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27081] Description:Quincey Koziol2015-05-152-24/+25
| | | | | | | | | | | | | | | | Clean up H5HL interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27080] Description:Quincey Koziol2015-05-151-595/+355
| | | | | | | | | | | | | | | | Clean up H5HF interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27079] Description:Quincey Koziol2015-05-151-8/+8
| | | | | | | | | | | | | | | | Clean up H5G interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27078] Description:Quincey Koziol2015-05-153-22/+20
| | | | | | | | | | | | | | | | Clean up H5FS interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27077] Description:Quincey Koziol2015-05-154-46/+67
| | | | | | | | | | | | | | | | Clean up H5FD interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27076] Description:Quincey Koziol2015-05-156-48/+107
| | | | | | | | | | | | | | | | Clean up H5FA interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27075] Description:Quincey Koziol2015-05-156-35/+46
| | | | | | | | | | | | | | | | Clean up H5F interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27074] Description:Quincey Koziol2015-05-155-56/+101
| | | | | | | | | | | | | | | | Clean up H5EA interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27073] Description:Quincey Koziol2015-05-152-4/+4
| | | | | | | | | | | | | | | | Clean up H5D interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27072] Description:Quincey Koziol2015-05-154-318/+203
| | | | | | | | | | | | | | | | Clean up H5B interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
| * [svn-r27071] Description:Quincey Koziol2015-05-158-479/+482
| | | | | | | | | | | | | | | | Clean up H5B2 interface, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux 2.6.* (jam) w/serial & parallel
| * [svn-r27070] Description:Quincey Koziol2015-05-154-64/+65
| | | | | | | | | | | | | | | | | | Clean up the H5B interface code, to better align with v3 metadata cache changes. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27068] Description:Quincey Koziol2015-05-155-370/+370
| | | | | | | | | | | | | | | | | | Clean up the H5A interface code, to better align with v3 metadata cache changes. Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel
| * [svn-r27058] Description:Quincey Koziol2015-05-1311-282/+495
| | | | | | | | | | | | | | | | | | | | Convert internal chunk structures to use 'scaled' coordinates instead of absolute coordinates. Tested on: Mac OSX/64 10.10.3 (amazon) w/parallel & serial Linux 2.6.x/32 (jam) w/parallel & serial Linux 2.6.x/64 (koala) w/serial
| * [svn-r27045] Renamed H5_ASSIGN_OVERFLOW() to H5_CHECKED_ASSIGN() and re-orderedDana Robinson2015-05-1051-150/+171
| | | | | | | | | | | | the arguments to be in a more logical order. Tested on: h5committest
| * [svn-r27040] Moved '*' in H5PLget_loading_state() so that bin/trace would ↵Dana Robinson2015-05-082-2/+3
| | | | | | | | | | | | | | | | correctly process it and ran bin/trace. Tested on: h5committest
| * [svn-r27031] Fix warnings in H5detect and clean up code, use unsigned variablesJerome Soumagne2015-05-061-149/+152
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Use H5_GCC_DIAG_ON/OFF to suppress larger-than and float-equal warnings Variables used with sigsetjmp/siglongjmp must be declared as volatile Remove unnecessary use of volatile after r24171 fix and fix prototypes Tested in release mode on: - jam (CentOS 5.11 i386 GCC 4.1.2) - ostrich (RHEL 6.6 ppc64 GCC 4.4.7) - local linux (OpenSuSE 13.2 x86_64 GCC 4.8.3) - local linux (Fedora 21 x86_64 GCC 4.9.2) - local linux (Fedora 21 x86_64 ICC 15.0.2) - local windows (Windows 8.1 x86_64 MSVC 2013 update 4) - lemur (MacOSX 10.10.3 x86_64 clang-602.0.49 Xcode 6.3.1) - ibm p95a07 (Ubuntu 14.10 ppc64le GCC 4.9.1) - ibm p95a07 (Ubuntu 14.10 ppc64le IBM XL C V13.1.1) - bluewaters (Cray PE 2.2.1 x86_64 GCC 4.8.2) - bluewaters (Cray PE 2.2.1 x86_64 Cray C 8.3.3) - bluewaters (Cray PE 2.2.1 x86_64 PGCC 14.2)
| * [svn-r27029] Fix bad comment in H5detect, this was preventing PGCC from ↵Jerome Soumagne2015-05-061-1/+1
| | | | | | | | | | | | compiling correctly. Tested on: bluewaters
| * [svn-r27009] Fix mismatching prototypes in H5FD/H5B2Jerome Soumagne2015-05-043-6/+6
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