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* Update text in COPYING files in subdirectories to match changes tolrknox2017-04-111-7/+4
| | | | | | | | copyright notices in source files. Update Copyright notices in acsite.m4 and bin/yodconfigure that were overlooked by chkcopyright. Remove broken and unnecessary urls from comments in hl/fortran/src/H5IMcc.c and hl/src/H5IM.c.
* Change copyright headers to replace url referring to file to be removedlrknox2017-04-06446-2694/+1796
| | | | | | | | and replace it with new url for COPYING file. Fix 2 lines in java error test expected output file where messages include line numbers changed by reducing the copyright header by 2 lines.
* Merge branch 'develop' into hdf5_1_10_1lrknox2017-04-041-5/+5
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| * Merge pull request #374 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop ↵Binh-Minh Ribler2017-04-031-5/+5
| |\ | | | | | | | | | | | | | | | | | | | | | | | | to develop Fix HDFFV-8089 * commit '52f8c2ed494ea1b89374981ecc6901abe8fd5fed': Fix HDFFV-8089 Description: Some code within an "ifdef H5D_CHUNK_DEBUG" block was using outdated data structure but not caught because the case of H5D_CHUNK_DEBUG being defined was never tested. It was commented out. I defined H5D_CHUNK_DEBUG, tested, and commented out again. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
| | * Merge branch 'develop' of ↵Binh-Minh Ribler2017-03-281-0/+2
| | |\ | | | | | | | | | | | | https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop
| | * | Fix HDFFV-8089Binh-Minh Ribler2017-03-281-5/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Some code within an "ifdef H5D_CHUNK_DEBUG" block was using outdated data structure but not caught because the case of H5D_CHUNK_DEBUG being defined was never tested. It was commented out. I defined H5D_CHUNK_DEBUG, tested, and commented out again. Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* | | | Merge branch 'develop' into hdf5_1_10_1lrknox2017-03-314-29/+116
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| * | | Omnibus checkin for several relatively minor modifications:mainzer2017-03-284-29/+116
| | |/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | 1) Added code test/page_buffer.c to verify that page buffering is disabled in parallel builds. 2) Added code to test/cache_image.c to verify correct interaction between evict on close and cache image -- in particular management of a file containing a cache image containing dirty metadata that has been opened R/O. Also fix for the bug exposed. 3) Added code to testpar/t_cache_image.c to verify expected procedure for reading cache images, and also supporting stats collection code needed for the test. 4) Repair of an overactive sanity check in H5C__reconstruct_cache_contents(). 5) Other minor tidies in passing. Tested serial and parallel, debug and production on Jelly.
| * | Add H5_DLL to H5AC_get_mdc_image_info() prototypeQuincey Koziol2017-03-241-1/+1
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| * | Add prototype for H5AC_get_mdc_image_infoQuincey Koziol2017-03-221-0/+2
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| * Minor style cleanupsQuincey Koziol2017-03-223-7/+8
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| * Revert "Switch h5clear for cache images to use existing ↵Quincey Koziol2017-03-225-0/+97
| | | | | | | | | | | | H5Pget_cache_image_config()" This reverts commit dd5105fc9912c77f6d6074700d83e5e8282e86c9.
| * Extend h5vers to update version strings in java files and h5repacklrknox2017-03-201-3/+3
| | | | | | | | | | | | | | | | version test expected output file. Update version on develop branch to 1.11.0. Please enter the commit message for your changes. Lines starting
* | Update version to 1.10.1-pre2.lrknox2017-03-291-2/+2
| | | | | | | | Switch default build mode from debug to production.
* | Switch maintainer mode off.lrknox2017-03-248-0/+7365
| | | | | | | | | | | | Update version to 1.10.1-pre1. Check in files generated by autogen.sh, and comment those out in .gitignore.
* | Update version to HDF5 1.10.1-pre1.lrknox2017-03-231-2/+2
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* | Add H5_DLL to function prototype.lrknox2017-03-231-1/+1
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* | Merge pull request #361 in HDFFV/hdf5 from merge_h5clear_revert to developQuincey Koziol2017-03-235-0/+98
| | | | | | | | | | | | * commit '46c9ab600de491657520897322b75659c3bdfb5f': Minor style cleanups Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
* | Add prototype for H5AC_get_mdc_image_infoQuincey Koziol2017-03-231-0/+2
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* | Merge branch 'hdf5_1_10' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 ↵lrknox2017-03-201-4/+4
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| * set initial version for HDF5 1.10.1.lrknox2017-03-171-4/+4
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* | Merge pull request #341 in HDFFV/hdf5 from ~MAINZER/hdf5_jrm:develop to developJohn Mainzer2017-03-206-20/+50
|\ \ | | | | | | | | | | | | | | | * commit 'b7c58f7dfca66d4caa26d7f8b318ad3514b8c46f': Minor code changes to address comments in pull request Checkin of additions to cache image parallel test code and associated bug fixes.
| * | Minor code changes to address comments in pull requestmainzer2017-03-173-3/+6
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| * | Checkin of additions to cache image parallel test code andmainzer2017-03-166-20/+47
| |/ | | | | | | | | | | | | | | | | | | | | | | associated bug fixes. Also, modifications to H5PB_dest() to flush the page buffer before destroying the page buffer. This is necessary, as when persistant free space managers are enabled, the page buffer will typically contain dirty FSM data at page buffer destroy time. Tested serial/debug, serial/production, serial/check-vfd/debug, parallel/debug, parallel/production on Jelly.
* | Update cmake pubconf to match autotools and add strtoll checksAllen Byrne2017-03-163-18/+39
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* Final merge of page buffering branch to developQuincey Koziol2017-03-1452-1717/+7486
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* Bring changes to I/O parameters from page_buffering branch.Quincey Koziol2017-03-1313-221/+324
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* Merge in reentrency changes to "make space in cache" from page_buffering branch.Quincey Koziol2017-03-132-0/+38
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* Minor cleanups and bring over "prefetched dirty" fixes for entries loaded fromQuincey Koziol2017-03-129-31/+204
| | | | a cache image.
* Remove some usage of "prefetched_dirty" flag (which hasn't been merged from theQuincey Koziol2017-03-103-416/+577
| | | | | page_buffering branch yet. Also, bring over improvements to flush candidate entries for parallel code.
* Align with incoming page buffering changes: minor cleanups, centralize removingQuincey Koziol2017-03-073-77/+133
| | | | entries from collective metadata read list
* Misc. small cleanups to sync against incoming page buffering changes.Quincey Koziol2017-03-023-57/+31
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* Normalize against incoming page buffering changes.Quincey Koziol2017-03-017-757/+749
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* Corrected version of 4b5e05c084f93c35dae946c2c9e814d565a613b0:Quincey Koziol2017-02-287-251/+187
| | | | | Fix some more signed -> unsigned value issues with cache data structures, also misc. style cleanups. All to align w/incoming page_buffering changes.
* Revert "Fix some more signed -> unsigned value issues with cache data ↵Quincey Koziol2017-02-286-83/+143
| | | | | | structures, also" This reverts commit 4b5e05c084f93c35dae946c2c9e814d565a613b0.
* Align w/incoming page buffering changes.Quincey Koziol2017-02-259-182/+121
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2017-02-231-2/+2
|\ | | | | | | merge_page_buffering_03
| * Changed C++ comments to C comments in H5win32defs.h.Dana Robinson2017-02-221-2/+2
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* | Fix some more signed -> unsigned value issues with cache data structures, alsoQuincey Koziol2017-02-236-143/+83
|/ | | | misc. style cleanups. All to align w/incoming page_buffering changes.
* Cleanups and normalizations against incoming page_buffering changes.Quincey Koziol2017-02-203-15/+23
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* Switch major error code from H5E_FSPACE [back] to H5E_RESOURCEQuincey Koziol2017-02-182-102/+102
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* Misc. style cleanups from the page_buffering branch.Quincey Koziol2017-02-187-673/+436
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* Minor warning fixes.Dana Robinson2017-02-091-1/+1
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* Merge pull request #281 in HDFFV/hdf5 from ↵Allen Byrne2017-02-031-0/+1
|\ | | | | | | | | | | | | | | | | | | | | | | ~BYRN/hdf5_adb:bugfix/HDFFV-9875-investigate-adding-static-library to develop * commit 'd1292691c42cbc548fc7e4b39e4dd9cc1a376f94': HDFFV-9875 enable static pdb and cleanup exports Add static lib to pdb exports HDFFV-9875 Fix typo HDFFV-9875 Change test for shared libs HDFFV-9875 Remove compile pdb references HDFFV-9875 Fix target exports and add static tools pdb files
| * Add static lib to pdb exportsAllen Byrne2017-02-021-1/+1
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| * HDFFV-9875 Fix target exports and add static tools pdb filesAllen Byrne2017-02-021-0/+1
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* | Optimize loading cache image, removing lots of memory allocations and copies.Quincey Koziol2017-02-031-201/+150
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* | Simplify H5C__serialize_single_entry(), using H5C__generate_image()Quincey Koziol2017-02-023-199/+74
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* Merge pull request #274 in HDFFV/hdf5 from develop_merge_cache_image_08 to ↵Quincey Koziol2017-01-311-41/+15
|\ | | | | | | | | | | | | develop * commit '0827105ddaffa5024ed25bd0268aa329f4b97e74': Review changes to closing files on error in H5Fcreate.
| * Review changes to closing files on error in H5Fcreate.Quincey Koziol2017-01-311-41/+15
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