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* [svn-r10511] James Laird2005-03-301-1/+6
| | | | | | | | | | | | | Purpose: "Bug fix" Description: Hardcoded Makefiles to use /bin/sh instead of letting configure detect shell automatically. This is what v1.6 does, and avoids problems on janus. Platforms tested: sleipnir, copper, modi4, mir
* [svn-r10509] James Laird2005-03-301-0/+2
| | | | | | | | | | | | | | Purpose: Bug fix Description: Header was expecting SRB headers to be installed. Solution: Only try to include SRB header if SRB is enabled. Platforms tested: sleipnir
* [svn-r10506] Purpose:Quincey Koziol2005-03-2912-24/+1014
| | | | | | | | | | | | New feature Description: Add first iteration of "segmented heap" code, which will be used to store links in groups in a more flexible way than the previous "local heap" mechanism. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti)
* [svn-r10505] Purpose:Quincey Koziol2005-03-293-53/+113
| | | | | | | | | | | | New feature Description: Search free list when checking for, or actually performing, extension of an object in the file. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10504] Purpose:Quincey Koziol2005-03-293-11/+166
| | | | | | | | | | | New feature Description: Add wrapper for v2 B-tree "neighbor" routine. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10503] Purpose:Quincey Koziol2005-03-291-1/+1
| | | | | | | | | | | Fix typo Description: Fix typo in comment. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10475] Purpose:James Laird2005-03-292-9/+51
| | | | | | | | | | | | | | | | | Feature - conditional compilation Description: SRB file driver and tests are now compiled only when SRB is enabled (using --with-srb during configure). Solution: Added an automake conditional in configure.in, altered Makefiles.am in src and test directories to depend on that conditional. This should make a nice example for posterity to add conditionally compiled sources. Platforms tested: heping (only configure change)
* [svn-r10469] Purpose: Minor typo fixRaymond Lu2005-03-281-9/+9
| | | | | | | | | | Description: During last change, part of the code wasn't updated in copy and paste accordingly. It was in the exception handling of NaN in H5T_conv_f_f(). Solution: Corrected. Platforms tested: No test needed - trivial.
* [svn-r10459] James Laird2005-03-281-0/+1
| | | | | | | | | | | | | | | | | Purpose: Added C++ wrapper for Packet Table API. Description: Added macro for high-level C++ library (LIBH5CPP_HL), which changes every Makefile.in. Added directories for high-level C++ library (though currently only Packet Table API is supported). Added both C++ source and tests. Platforms tested: sleipnir, mir, modi4 Misc. update:
* [svn-r10456] Purpose: New way to do conversion test from floating-points to ↵Raymond Lu2005-03-262-40/+207
| | | | | | | | | | | | | | | | | | | integers. Description: The 6th step of changing conversion test. This checkin is only for conversion of special values from floating-points to integers. Solution: This test is seperated from regular value conversion. It reuses the same function test_conv_int_float() in test/dtypes.c. The source buffer of floating-point type is filled up with 8 special values, +/-0, +/-infinity, +/-QNaN, +/-SNaN. Also added 3 new conversion exception values H5T_CONV_EXCEPT_PINF, H5T_CONV_EXCEPT_NINF, H5T_CONV_EXCEPT_NAN, for floating-point special values positive infinity, negative infinity, and NaN. These values are for conversion exception callback function defined through H5Pset_type_conv_cb(). (Remember to update the document!) Platforms tested: h5committest
* [svn-r10421] Purpose:Quincey Koziol2005-03-255-9/+110
| | | | | | | | | | | | | | New feature & code cleanup Description: Add feature to find first block >= a certain size (useful for allocating space) Cleaned up various comments, etc. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10402] Purpose: New way to do conversion test between floating-point ↵Raymond Lu2005-03-241-6/+26
| | | | | | | | | | | | | types. Description: The 5th step of changing conversion test. This checkin is only for conversion of special values between floating-point types. Solution: This test is seperated from regular value conversion. It reuse the same function test_conv_flt_1() in test/dtypes.c. The source buffer of floating-point type is filled up with 8 special values, +/-0, +/-infinity, +/-QNaN, +/-SNaN. Platforms tested: h5committest, fuss, and modi4.
* [svn-r10396] Purpose:Xiaowen Wu2005-03-241-5/+3
| | | | | | | | | | | | | | Minor modification. Description: Remove some redundant codes. Solution: Platforms tested: heping Misc. update:
* [svn-r10384] Purpose:Xiaowen Wu2005-03-231-322/+1297
| | | | | | | | | | | | | | | | | | New feature & bug fix. Description: The scaleoffset filter was not completed at last check-in and had quite a few bugs. Solution: The scaleoffset filter is now complete for compressing integers. All previous bugs have been fixed. The filter does not compress floating-point at present. The filter only supports integer and floating-point datatypes. Platforms tested: heping, copper, shanti Misc. update:
* [svn-r10266] Purpose: Bug fixRaymond Lu2005-03-221-31/+29
| | | | | | | | | | Description: The recent change of conversion between floating-point and floating-point types in dtypes.c have detected some bugs in H5T_conv_f_f in H5Tconv.c. Solution: This checkin is to fix these bugs. They happened in a few places in H5T_conv_f_f causing incorrect rounding, denormalization, etc. Platforms tested: h5committest and modi4
* [svn-r10238] Purpose:Quincey Koziol2005-03-207-114/+164
| | | | | | | | | | | | | | | | Optimization Description: Speed up I/O on enumerated datatypes (including those nested in compound datatypes, arrays, etc.) if the destination datatype is a proper superset of the source datatype. Solution: Detect the situation and treat as no-op datatype conversion. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10231] Purpose:Quincey Koziol2005-03-181-21/+29
| | | | | | | | | | | | | | | | Bug fix Description: Opening an object in a group that is located in a file which has been unmounted would cause a core dump. :-( Solution: Re-arrangement internal code to compute internal "user" and "canonical" names for the newly opened object in a safer way. Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10230] Purpose:Quincey Koziol2005-03-182-0/+49
| | | | | | | | | | | New feature Description: Add in support for deleting entire block tracker. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10229] Purpose:Quincey Koziol2005-03-171-2/+2
| | | | | | | | | | | Update comments Description: Correct some minor errors in comments/error strings. Platforms tested: FreeBSD 4.11 (sleipnir) w/parallel Solaris 2.9 (shanti)
* [svn-r10216] James Laird2005-03-141-10/+15
| | | | | | | | | | | | | | | | Purpose: Bug fix Description: Calling H5Iobject_verify on an invalid type of ID (e.g., H5I_BADID) triggers an assert. Solution: Test for this condition and return an error instead of an assert. Added tests for this case. Platforms tested: sleipnir (minor change)
* [svn-r10215] Purpose:James Laird2005-03-141-2/+2
| | | | | | | | | | | | | | | | | Configure feature Description: On some platforms with some compilers, automake's dependency tracking is silently disabled. This can be confusing for developers. Solution: Set configure to enable dependencies all the time unless the user explicitly disables them (using the configure flag --disable-dependency-tracking) or a site file overrides the default (as is the case on IRIX). Platforms tested: sleipnir, mir
* [svn-r10208] Purpose:MuQun Yang2005-03-141-0/+4
| | | | | | | | | | | | | | Collective chunk IO configuration Description: Forgot adding H5config.h.in to the CVS tree. Solution: Platforms tested: Copper, heping Misc. update:
* [svn-r10203] Purpose:Quincey Koziol2005-03-111-3/+46
| | | | | | | | | | | New feature/tests Description: Add better support & tests for removing blocks being tracked. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10199] Purpose:Quincey Koziol2005-03-112-0/+155
| | | | | | | | | | | New feature Description: Add basic block removal feature Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10198] Purpose:Quincey Koziol2005-03-111-37/+179
| | | | | | | | | | | New feature Description: Handle merging new blocks with existing blocks Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10196] Purpose:Quincey Koziol2005-03-111-2/+2
| | | | | | | | | | Code cleanup Description: Actually use the new error code defined... :-) Platforms tested: None, too minor to require re-test.
* [svn-r10195] Purpose:Quincey Koziol2005-03-117-2/+198
| | | | | | | | | | | New feature Description: Add feature to modify an existing record in a B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10191] Purpose:Quincey Koziol2005-03-115-13/+152
| | | | | | | | | | | | New tests Description: Add some internal validation routines and make certain that the max & min block sizes get tracked accurately, at least for a simple series of insertions Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10190] Purpose:Quincey Koziol2005-03-112-2/+48
| | | | | | | | | | | New feature Description: Add query for the total size of blocks tracked Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10189] Purpose:Quincey Koziol2005-03-111-1/+52
| | | | | | | | | | | | | New feature & bug fix Description: Support inserting multiple blocks Start tracking the metadata about the blocks. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10188] Purpose:Quincey Koziol2005-03-111-10/+10
| | | | | | | | | | | Bug fix Description: Correct the native record size. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10187] Purpose:Quincey Koziol2005-03-118-45/+36
| | | | | | | | | | | | | Code cleanup, mostly Description: Remove remaining TBBT error info Add new error code for block tracker Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10186] Purpose:Quincey Koziol2005-03-112-0/+116
| | | | | | | | | | | New feature Description: Add basic code to insert blocks into block tracker. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10185] Purpose:Quincey Koziol2005-03-111-3/+9
| | | | | | | | | | | | | | New feature & bug fix Description: Allow NULL 'op' for find operations to easily query the existance of a record for a key during H5B2_find() operations. Fix H5B2_neighbor() to work properly with empty B-tree Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10184] Purpose:Quincey Koziol2005-03-1119-14/+1014
| | | | | | | | | | | | | | | | | | | | New feature Description: Add new "block tracker" data structure to library, for tracking blocks of bytes in a file. Block trackers will be used to keep track of the blocks belonging to the soon-to-be-implemented "segmented heap" which is designed to replace the current local & global heaps (starting with the local heap). Block trackers will also keep track of the free space in the segmented heap and someday could be used to track the free space in the entire HDF5 file. They are implemented as a small header of information to cache the state of the blocks (max & min sizes of blocks tracked, etc.) and the records of the blocks themselves are stored in a v2 B-tree. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti) h5committest
* [svn-r10183] Purpose:Quincey Koziol2005-03-112-2/+2
| | | | | | | Fix comment Platforms tested: None, too minor...
* [svn-r10182] Purpose:Quincey Koziol2005-03-111-0/+7
| | | | | | | | | | | Add comments Description: Add note to investigate "deterministic skip lists", in case I forget... Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10181] Purpose:Quincey Koziol2005-03-111-12/+15
| | | | | | | | | | | Code cleanup Description: Make more of the loops over the types of memory use the existing macros. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10178] Purpose:Quincey Koziol2005-03-101-6/+6
| | | | | | | | | | Correct formatting Description: Move some typedefs out of the macro section into the typedef section Platforms tested: None, too minor to require any.
* [svn-r10177] Purpose:Quincey Koziol2005-03-101-3/+2
| | | | | | | | | | Update comments Description: Correct comment about how H5B2_create() works. Platforms tested: None, just minor comment change.
* [svn-r10176] Purpose:Quincey Koziol2005-03-102-6/+135
| | | | | | | | | | | New feature Description: Add routine to delete entire B-tree from a file. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10175] Purpose:Quincey Koziol2005-03-101-5/+5
| | | | | | | | | | | Code cleanup Description: Clean up a few warnings flagged by the Intel C compiler. Platforms tested: FreeBSD 4.11 (sleipnir) w/Intel C Too minor to require h5committest
* [svn-r10172] Purpose:Quincey Koziol2005-03-092-14/+276
| | | | | | | | | | | | | | Bug fix & New feature Description: Correct some situations where a write lock on the data in the metadata cache was requested, but only a read lock is necessary. Add routine to find nearest neighbor record < or > to a query key. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10169] Purpose:Quincey Koziol2005-03-081-1/+2
| | | | | | | | | | | Bug fix Description: Correct minor array bounds read error of 0 bytes that purify found. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10168] Purpose:Quincey Koziol2005-03-081-1/+0
| | | | | | | | | | | | Bug fix & new tests Description: Fix another couple of issues with record removal and add some more tests to make certain removals work correctly. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10162] Purpose:Quincey Koziol2005-03-081-10/+4
| | | | | | | | | | | | | Bug fix & new tests Description: Fix several errors in record removel routines, which should now be feature complete for removing records at any location in the B-tree (further testing will verify this) Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10161] Purpose:Xiaowen Wu2005-03-081-30/+182
| | | | | | | | | | | | | | | | | | New feature. Description: The nbit filter does not support situations where datatype of string, time, enum, variable-length, bitfield, opaque, reference is a field of a compound datatype or array datatype. Solution: Modify the nbit filter to hanle such situations. The filter is a no-op to these dataytypes. Platforms tested: copper, heping. Misc. update:
* [svn-r10159] Purpose:Quincey Koziol2005-03-071-28/+39
| | | | | | | | | | | | Bug fix Description: Corrected errors in record removal code to handle removing records in higher nodes in the B-tree. Platforms tested: FreebSD 4.11 (sleipnir) Solaris 2.9 (shanti)
* [svn-r10158] Purpose:James Laird2005-03-071-264/+311
| | | | | | | | | | | | | | | | | | | | | | Automake version upgrade Description: Upgraded automake version from 1.6.2 to 1.9.5. Changed bin/reconfigure script to use automake 1.9.5. Changed configure.in and Makefiles to use new FCFLAGS and FC variables instead of FFLAGS and F9X. Automake and configure should now do the lion's share of the work supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will be cleaned later). Altered how configure handles pmake; now root-level Makefile.in is processed by bin/reconfigure to have a .MAKEFLAGS target, since automake no longer allows us to define unused variables. Configure now always checks for C++ compiler even if it is not used, since automake thinks this is the Right Thing To Do and will break otherwise. Platforms tested: Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
* [svn-r10156] Purpose:Quincey Koziol2005-03-051-18/+74
| | | | | | | | | | | Bug fix & new feature Description: Allow B-tree's height to be reduced when removing records. Platforms tested: FreeBSD 4.11 (sleipnir) Solaris 2.9 (shanti)
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