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* [svn-r23162] synchronized DECTRIS branch (r23161) with the trunkRaymond Lu2013-01-145-35/+283
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| * [svn-r23161] ported revisions 23146:23160 from the trunkRaymond Lu2013-01-143-4/+4
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| * [svn-r23152] I took out the obsolete function H5PSIwrite_chunk and its ↵Raymond Lu2013-01-112-89/+1
| | | | | | | | | | | | related test and performance test. Tested on koala.
| * [svn-r23147] ported revisions 23081:23145 from the trunkRaymond Lu2013-01-098-766/+666
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| * [svn-r23081] ported revisions 22987 to 23080 from the trunkRaymond Lu2012-12-0614-292/+92
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| * [svn-r23078] I took out O_SYNC flag from the code. I used it to do ↵Raymond Lu2012-12-053-6/+3
| | | | | | | | | | | | | | | | performance test. But we decided not to support it. Tested on koala.
| * [svn-r23075] I revised the code and test according to Quincey's review. I ↵Raymond Lu2012-12-043-18/+19
| | | | | | | | | | | | also added more test cases. Tested on koala.
| * [svn-r23017] I added a prototype function H5DOwrite_chunk in HL library for ↵Raymond Lu2012-11-075-43/+187
| | | | | | | | | | | | | | | | | | Dectris people to test performance. The library's API function H5PSIdirect_write is still in. I reorganized the internal library by adding H5D__pre_write function. Tested on koala.
| * [svn-r22987] ported revisions from 22742 to 22986 from the trunkRaymond Lu2012-10-2941-616/+5005
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| * [svn-r22739] ported revisions 22615 to 22737 from the trunkRaymond Lu2012-09-0572-2391/+2895
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| * | [svn-r22728] I forgot to include H5MMprivate.h header file for using ↵Raymond Lu2012-08-301-0/+1
| | | | | | | | | | | | | | | | | | H5MM_free function. Tested on koala.
| * | [svn-r22655] Dectris project - I changed the rank of the offset for ↵Raymond Lu2012-08-091-5/+14
| | | | | | | | | | | | | | | | | | | | | | | | H5PSIdirect_write from RANK+1 to RANK. But internally, it expands to RANK+1 as the library requires it to terminate with a zero. Tested on koala.
| * | [svn-r22653] Dectris project: I revised the code per Quincey's suggestion.Raymond Lu2012-08-091-4/+6
| | | | | | | | | | | | Tested on koala.
| * | [svn-r22641] Dectris project: I revised the code per Quincey's and Neil's ↵Raymond Lu2012-08-0810-54/+56
| | | | | | | | | | | | | | | | | | comments. I added a performance benchmark program dectris_perf.c in the test/ directory. Tested on koala and jam.
| * | [svn-r22616] The code for H5PSIdirect_write and its test dectris_tst.c.Raymond Lu2012-07-306-0/+184
| | | | | | | | | | | | Tested on koala and jam.
* | | [svn-r23160] HDFFV-8227: Mac DARWIN requires CMake 2.8.10Allen Byrne2013-01-141-1/+1
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* | | [svn-r23153] Snapshot version 1.9 release 140HDF Tester2013-01-132-3/+3
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* | | [svn-r23136] Snapshot version 1.9 release 139HDF Tester2013-01-062-3/+3
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* | | [svn-r23121] Snapshot version 1.9 release 138HDF Tester2012-12-302-3/+3
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* | | [svn-r23119] Snapshot version 1.9 release 137HDF Tester2012-12-232-3/+3
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* | | [svn-r23111] Purpose:Dana Robinson2012-12-196-763/+663
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fixes for HDF5 1.8.10 p1 HDFFV-7975 Changed the max single I/O operation size on Darwin/Mac OS X. HDFFV-8124 and HDFFV-8158 Fixed a core VFD bug when large blocks of data are read. HDFFV-8246 Added more fields to the VFD read/write error messages. Tested on: 64-bit Windows 7, Visual Studio 2010, CMake 64-bit Mac OS X Snow Leopard (Fred), Fortran, C++ 64-bit BE Linux (Ostrich), Fortran, C++ 32-bit LE Linux (jam), Fortran, C++ (also parallel w/ Fortran)
* | | [svn-r23085] Snapshot version 1.9 release 136HDF Tester2012-12-092-3/+3
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* | | [svn-r23071] Snapshot version 1.9 release 135HDF Tester2012-12-022-3/+3
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* | | [svn-r23050] Snapshot version 1.9 release 134HDF Tester2012-11-252-3/+3
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* | | [svn-r23048] Description:Quincey Koziol2012-11-211-11/+10
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r20456 from Coverity branch to trunk: fixed coverity 678, 679 Tested on: Mac OSX/64 10.8.2 (amazon) w/debug (too minor to require h5committest)
* | | [svn-r23039] Snapshot version 1.9 release 133HDF Tester2012-11-182-3/+3
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* | | [svn-r23021] Snapshot version 1.9 release 132HDF Tester2012-11-112-3/+3
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* | | [svn-r23010] Description:Quincey Koziol2012-11-051-1/+4
| | | | | | | | | | | | | | | | | | | | | | | | Initialize cd_values pointer when cd_elemts is zero. Tested on: Mac OSX/64 (amazon) w/debug Windows (via Allen's builds)
* | | [svn-r22998] Description:Quincey Koziol2012-11-016-20/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Clean up warnings and bring changes from Coverity branch back to trunk: r20451: Fixed coverity 810 r20454: Purpose: Fix coverity issue 816 Description: Modified various file drivers to always check the return value from H5P_get_driver_info. r20455: Purpose: Cleanup fix for coverity issue 816 Description: Removed redundant check for "fa" in H5FD_core_open. Tested on: Mac OSX/64 10.8.2 (amazon) w/debug (Too minor to require h5committest)
* | | [svn-r22992] Purpose:Jonathan Kim2012-10-304-257/+54
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | HDFFV-8146 - Remove "multi-chunk IO without optimization" sub-feature from MPI I/O optimization for chunked dataset feature Description: The “multi-chunk IO without optimization” feature is removed and made the related xfer property (H5FD_MPIO_CHUNK_MULTI_IO) go directly to “multi-chunk-io” feature. Also update/fix/cleanup testings (chunk collective IO and actual chunk opt mode) accordingly. Tested: jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), fred (mac64-LE), Windows (32-LE cmake), cmake (jam)
* | | [svn-r22943] Changed the spelling of accessability to accessibility.Mark Evans2012-10-225-10/+10
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* | | [svn-r22935] Description:Quincey Koziol2012-10-211-14/+11
| | | | | | | | | | | | | | | | | | | | | | | | | | | Clean up a few warnings and minor code issues during review of enum -> int/float conversion changes. Tested on: Mac OSX/64 10.8.2 (amazon) w/debug (too minor to require h5committest)
* | | [svn-r22921] Description:Quincey Koziol2012-10-181-0/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Review Coverity changes and bring them back to trunk. (QK & JK) r20402: Added #includes for h5tools.y or h5tools_utils.h as required to remedy implicit function declarations which caused compiler warnings and coverity issues 703-4 and 708-11. r20414: This is related to the previous checkin r20399. There were incorrect updates which caused incorrect behavior when no file was given. Also possible segfault when handling hyperslab options. Simplify the code changes. r20449: Description: Modified H5E_walk2_cb to check return value of H5I_object_verify. r20450: fixed coverity 813 Tested on: Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, debug & threadsafe (too minor to require h5committest)
* | | [svn-r22915] Description:Quincey Koziol2012-10-172-6/+4
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity changes back to trunk: r20399: Change parse_command_line to free hand structure on error and only "leave()" at end of main. r20400: Purpose: Fix coverity issue 592 Description: Added void cast to call to H5F_sfile_assert_num() in H5F_term)interface(). There is no need to check the return value of this function in general, and there would be nothing to do even if it did fail. r20401: Added free(src_sizes) and free(src_offset). --gh Tested on: Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, threadsafe (too minor for h5committest)
* | | [svn-r22914] I checked in the conversion function H5T__conv_enum_numeric ↵Raymond Lu2012-10-173-0/+89
| | | | | | | | | | | | | | | | | | (numeric type means integer or floating number) and the C test for it. This is the work for Chicago. Tested on jam, koala, and ostrich.
* | | [svn-r22908] Reverted changes in revision 22819Larry Knox2012-10-161-2/+0
| | | | | | | | | | | | Tested with h5committest on jam, koala and ostrich.
* | | [svn-r22866] Description:Quincey Koziol2012-10-0512-122/+184
| | | | | | | | | | | | | | | | | | | | | | | | | | | Correct use of 'uint8_t' parameter type in public header file (which was causing Windows builds to fail). Tested on: Mac OSX/64 10.7.5 (amazon) w/debug (too minor to require h5committest)
* | | [svn-r22846] Snapshot version 1.9 release 131HDF Tester2012-09-302-3/+3
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* | | [svn-r22819] Added H5BLD_STATIC and HDF5_USE_SHLIB to configure.ac so that ↵Larry Knox2012-09-271-0/+2
| | | | | | | | | | | | | | | | | | if configured with --disable-static the default for HDF5_USE_SHLIB in the compile scripts will be changed to yes. This is a fix for HDFFV-8141, where the compile scripts try to link to non-existant static hdf5 libraries. Tested on jam,koala,ostrich(h5committest) and other THG machines.
* | | [svn-r22817] Description:Quincey Koziol2012-09-261-0/+1
| | | | | | | | | | | | Update CMake files for new encode/decode property list files.
* | | [svn-r22807] Description:Quincey Koziol2012-09-2527-257/+4470
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add encode/decode API routines for property lists: H5Pencode/H5Pdecode. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (ostrich) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (ember) w/Intel compilers, w/parallel, C++ & FORTRAN, in production mode Mac OS X/32 10.7.3 (amazon) in debug mode Mac OS X/32 10.7.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.7.3 (amazon) w/parallel, in debug mode
* | | [svn-r22802] Snapshot version 1.9 release 130HDF Tester2012-09-232-3/+3
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* | | [svn-r22785] HDFFV-8153: Pull POSIX_C_SOURCE define out to separate ↵Allen Byrne2012-09-181-0/+5
| | | | | | | | | | | | | | | | | | variable. Use ADD_DEFINITIONS (${HDF5_EXTRA_C_FLAGS}) in non-fortran CMakeLists.txt folders Tested: jam with intel compilers
* | | [svn-r22772] Synch line spaces with 1.8Allen Byrne2012-09-171-0/+21
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* | | [svn-r22766] Snapshot version 1.9 release 129HDF Tester2012-09-162-3/+3
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* | | [svn-r22763] Purpose:Jonathan Kim2012-09-142-5/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | HDFFV-8143 Provide a routine(s) for telling the user why the library broke collective data access Description: Fixed Daily test failed from the previous commit r22735. (ember) Also changed H5Pget_mpio_no_collective_cause() parameter type from H5D_mpio_no_collective_cause_t to uint32_t due to change to return combined bitmap value which can be not emun defined value. Tested: jam (linux32-LE), koala-pp (linux64-LE), ember, h5committest
* | | [svn-r22758] Description:Quincey Koziol2012-09-1313-336/+335
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring generic improvements from encode/decode property list branch to the trunk. This includes a better version of the property list comparison routine, cleaned up compiler warnings, and some cleaned up property list callbacks. Also, started on changes to clean up parallel test output, so that it doesn't report successful tests from each process. Tested on: Mac OSX/64 10.7.4 (amazon) w/debug, GCC 4.7.x, FORTRAN, C++, threadsafe and parallel Linux 2.6/32 (jam) w/debug Solaris 2.7/64 (linew) w/debug
* | | [svn-r22750] Removed check-in r22746 because it causes an error in objcopy ↵Scot Breitenfeld2012-09-101-4/+0
| | | | | | | | | | | | | | | | | | on Linew 64 byte. Will check-in again after the issue is resolved.
* | | [svn-r22749] Description:Dana Robinson2012-09-1010-758/+887
| | | | | | | | | | | | | | | | | | | | | Undo of accidental check-in of H5T code in last check-in. Tested on: jam w/ parallel enabled (revert to pre-existing code)
* | | [svn-r22748] Description:Dana Robinson2012-09-1011-890/+761
| | | | | | | | | | | | | | | | | | | | | H5FD_FLMAP_SINGLE changed to H5FD_FLMAP_DICHOTOMY in the MPI-POSIX VFD. Tested on: jam w/ parallel and fortran enabled (minor change)
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