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* [svn-r7458] Purpose:Quincey Koziol2003-09-101-22/+25
| | | | | | | | | | | | | | | | | | Bug fix. Description: Correct bug where a file opened twice, once with read-write permission and once with read-only permission would cause closing the file with the read-only file ID to fail because it was trying to flush information out of the file. Solution: Check the permissions on file IDs that are being closed and only flush when the particular file ID was opened with write permission. Platforms tested: FreeBSD 4.9 (sleipnir) too small to need h5committest
* [svn-r7455] Purpose:Quincey Koziol2003-09-103-20/+39
| | | | | | | | | | | Checkpoint file format revisions. Description: Clarifications and cleanups related to file format review. Platforms tested: FreeBSD 4.9 (sleipnir) Too minor to need h5committest
* [svn-r7447] Snapshot version 1.6 release 0 (post4)HDF Admin2003-09-081-2/+2
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* [svn-r7443] Purpose:Quincey Koziol2003-09-041-2/+2
| | | | Snapshot repo for bug fix testing
* [svn-r7442] Purpose:Quincey Koziol2003-09-042-4/+9
| | | | | | | | | | | | | | | | | Bug fix Description: The VFL driver ID in a file's access proprty list wasn't being reference counted correctly, causing the VFL driver to get prematurely closed after several calls to "H5Pget_access_plist->H5Pclose". Solution: Increment VFL driver ID reference count when copy of file's access property list is made in H5Pget_access_plist() Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7437] Snapshot version 1.6 release 0 (post2)HDF Admin2003-09-012-3/+3
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* [svn-r7435] Purpose:Quincey Koziol2003-08-3116-148/+167
| | | | | | | | | | | | | | | | | | | | Bug Fix and code cleanup Description: Correct error in H5T_detect_class that was causing nested compound datatypes with to not detect the datatype class of fields correctly, which caused errors with fill-values, variable-length datatypes and chunks later on. Return the rank of the array datatype from H5Tget_array_dims(), like H5Sget_dims(). Lots of cleanups to datatype code, to make the handling of arrays, compound types, variable-length strings and sequences and enumerated types more consistent and robust. Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r7427] Purpose:Quincey Koziol2003-08-286-10/+55
| | | | | | | | | | | | | | | | | Bug fix Description: When datasets are deleted from a file, they are removed from the sieve buffer, but instead of invalidating only the part of the sieve buffer affected, the sieve buffer code would throw away the entire sieve buffer, potentially including other raw data in the buffer that hadn't been written to disk yet. Solution: Improve the sieve buffer clearing code to handle partial invalidations. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7413] Purpose:Quincey Koziol2003-08-261-5/+6
| | | | | | | | | | | | | | | | | | | Bug fix Description: H5Gget_objname_by_idx should allow NULL for the 'name' parameter, to allow for querying for the name's length. Solution: Allow NULL for the 'name' parameter, the internal functions were already ready to handle that case. Clean up RM information about H5Gget_objname_by_idx and H5Gget_objtype_by_idx also. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7409] Purpose:Albert Cheng2003-08-251-0/+2
| | | | | | | | | | | | Bug fix. Description: Added MPE color definintions for the Stream-vfd API. Platforms tested: Tested in Copper since MPE only works there. Misc. update:
* [svn-r7405] Purpose:Quincey Koziol2003-08-251-37/+12
| | | | | | | | | | | | | | | | Bug fix Description: Correct bug creating native versions of "complex" compound datatypes on certain architectures (Sparc-Solaris) which require stricter alignment. Also, correct bug where metadata (padding type, etc.) for strings was incorrectly dropped. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7403] Purpose:Quincey Koziol2003-08-251-8/+12
| | | | | | | | | | | | | | | | | | | Bug fix Description: Correct problem with mis-aligned string pointers on certain architectures (i.e. on modi4) causing a core dump. The string pointers can be mis-aligned due to being part of a compound datatype and how our compound type conversion routines work. Solution: Allocate string with temporary variable and memcpy() the pointer to the new string into the type conversion buffer, instead of dereferencing the type conversion buffer directly. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7392] Purpose:Quincey Koziol2003-08-224-62/+91
| | | | | | | | | | | | | | | | Bug fix Description: H5Gget_num_objs, H5Gget_objname_by_idx and H5Gget_objtype_by_idx were only accepting a group ID, instead of a location ID, as our documentation for them stated. Solution: Allow them to accept a location ID. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7385] Purpose:Quincey Koziol2003-08-201-2/+4
| | | | | | | | | | | | Bug fix Description: Correct a bug which was incrementing the incorrect driver ID of a file driver and also no saving the correct driver ID for the newly opened file. Platforms tested: FreeBSD 4.8 (sleipnir) too minor for h5committest
* [svn-r7382] Purpose:Quincey Koziol2003-08-191-8/+30
| | | | | | | | | | | | | | | | Bug fix Description: I/O on chunked datasets with a scalar dataspace for the memory dataspace was not working correctly. Solution: Translate the scalar dataspace into a n-dimensional (where n is the number of dimensions of the file's dataspace) dataspace of dimensions 1x1x1... Platforms tested: FreeBSD 4.8 (sleipnir) h5committest (modulo modi4 which is not working correctly)
* [svn-r7378] Purpose:Quincey Koziol2003-08-161-12/+104
| | | | | | | | | | | | | | | | Bug fix Description: Linking and unlinking objects with multiple internal and/or trailing '/'s was not handled well in the library. Solution: "Normalize" strings by removing trailing '/'s and collapsing multiple internal '/'s down into just one '/' before operating on the name. Platforms tested: FreeBSD 4.8 (sleipnir) h5committested
* [svn-r7363] Purpose:Quincey Koziol2003-08-143-3/+16
| | | | | | | | | | | | | Bug fix Description: Allow a user block to be "inserted" in front of a file (probably by writing a validly-sized userblock to a new file and then appending another HDF5 file to the new file). Platforms tested: FreeBSD 4.8 (sleipnir) h5committested
* [svn-r7357] Purpose:Albert Cheng2003-08-131-1/+15
| | | | | | | | | | | | | added formal copyright notice. Description: Solution: Platforms tested: h5committested Misc. update:
* [svn-r7333] Snapshot version 1.6 release 0 (post1)HDF Admin2003-08-111-2/+2
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* [svn-r7281] Snapshot version 1.6 release 0 (post0)HDF Admin2003-08-041-2/+2
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* [svn-r7258] Purpose:Quincey Koziol2003-07-233-368/+358
| | | | | | | | | | | | | | | Bug fix Description: I/O on chunked datasets with point selections was not working correctly. Solution: Re-wrote some parts of raw data I/O routines that build the selections for each chunk to correctly handle point selections. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7242] Purpose:Quincey Koziol2003-07-211-6/+19
| | | | | | | | | | | | Bug fix Description: Fix bug with combination of fill-values, chunked datasets and variable-length strings. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7234] Purpose:Quincey Koziol2003-07-166-83/+131
| | | | | | | | | | | | | | | | | | | | Bug fix Description: When a non-default indexed storage B-tree internal 'K' value is set by the user, the chunked datasets created in that file (until it is closed) use the user's 'K' value and the data can be accessed correctly, but the 'K' value is not stored in the file. However, once the file is closed and re-opened, the non-default 'K' value is lost and the data in the chunked datasets will not be able to be accessed correctly. Solution: Store the indexed storage B-tree internal 'K' value in the superblock. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7218] Purpose:Quincey Koziol2003-07-143-20/+21
| | | | | | | | | | | | | | Bug fix Description: H5T_BKG_TEMP was accidentally removed from library code, but is used by application's datatype conversion routines. Solution: Revert removal of H5T_BKG_TEMP. Platforms tested: h5committest
* [svn-r7197] Purpose:Quincey Koziol2003-07-101-2/+11
| | | | | | | | | | | Code cleanup Description: Add version number checking to local heap code. Platforms tested: FreeBSD 4.8 (sleipnir) too small to need h5committest
* [svn-r7176] Purpose:Quincey Koziol2003-07-071-2/+2
| | | | | | | | | | | | | | | | | | Bug fix Description: Boot block checksum was being used instead of file driver info checksum in one calculation. Also, the offset of the file driver info was hard-coded to the end of the superblock, instead of using the file driver offset variable. Solution: Changed to use file driver checksum and file driver offset variable. Platforms tested: FreeBSD 4.8 (sleipnir) too small for h5committest
* [svn-r7174] Purpose:Quincey Koziol2003-07-071-2/+8
| | | | | | | | | | | | | | | Bug fix Description: Fix "unaligned access" warning on IA64 (and alpha, probably) machines. Solution: Make certain that temporary destination buffer is aligned on correct boundary for type conversion. Platforms tested: IA64 Linux cluster (titan) too small for h5committest
* [svn-r7171] Purpose:Quincey Koziol2003-07-073-13/+13
| | | | | | | | | | | Code cleanup Description: Remove "UNUSED" keyword from function prototypes in header files. Platforms tested: IA64 Linux cluster (titan) too small to need commit test
* [svn-r7169] Purpose: Maintenance after 1.6.0 releaseElena Pourmal2003-07-031-2/+2
| | | | | | | | | | | | | | Description: Run bin/h5vers script to change version to 1.6.0-post0 after creating release tar ball and tagging the release. Modified HISTORY.txt and RELEASE.txt for 1.6.0-post0 1.6 branch is open for checking in source code. Solution: Platforms tested: Misc. update:
* [svn-r7165] Purpose: Maintenance for 1.6.0 releaseElena Pourmal2003-07-031-2/+2
| | | | | | | | | | | Description: Changed version number to be 1.6.0 with empty substring for the release Solution: Used bin/h5vers -s 1.6.0 to update all necessary files. Platforms tested: verbena Misc. update:
* [svn-r7164] This commit was manufactured by cvs2svn to create branch 'hdf5_1_6'.cvs2svn2003-07-032-257/+0
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* [svn-r7146] Purpose:Albert Cheng2003-07-032-5/+5
| | | | | | | | | | | | | | | update for release Description: Set the version information to 1.6.0-pre1 to get ready for v1.6 release. (Not sure why H5F.c got changed--probably done gmake automatically during testing.) Platforms tested: h5committested. Misc. update:
* [svn-r7131] Purpose: Maintenance for the fifth round of testingElena Pourmal2003-07-011-2/+2
| | | | | | | | | | | Description: Bumped version number for 1.5.63 after creating a tar ball for the next round of testing Solution: Platforms tested: Misc. update:
* [svn-r7126] Purpose:Quincey Koziol2003-06-304-3/+25
| | | | | | | | | | | | | Code cleanup Description: Add in rest of szip "options mask" macros that were missing. Also made "raw" options mask set by the library, instead of requiring users to always set it. Platforms tested: FreeBSD 4.8 (sleipnir) Minor tweaks too small fo h5committest
* [svn-r7122] Purpose:Quincey Koziol2003-06-308-28/+15
| | | | | | | | | | | | | Code cleanup/Feature removal Description: Remove "round robin" writing of metadata in MPI VFDs (and a couple of other places). This never really worked the way I hoped it would and it causes problems on certain machines. Platforms tested: FreeBSD 4.8 (sleipnir) w/parallel Too small for triple check.
* [svn-r7116] Purpose:Quincey Koziol2003-06-2725-48/+101
| | | | | | | | | | | | Update code Description: Move "PABLO_MASK" definition above header file inclusion to avoid problems with inline functions in header files. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7109] Purpose:Quincey Koziol2003-06-262-3/+3
| | | | | | | | | | | Code cleanup Description: Clean up varios compiler warnings flagged by SGI compiler and gcc 3.3 Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7099] Elena Pourmal2003-06-241-2/+2
| | | | | | | | | | | | | Purpose: Maintenance Description: Bumped the version number to 1.5.62 after creating a tar ball for the fourth round of testing. Solution: run bin/h5vers -s scipt on arabica Platforms tested: N/A Misc. update:
* [svn-r7097] Purpose:Quincey Koziol2003-06-241-11/+14
| | | | | | | | | | | | | | | | | | | | | Bug fix Description: Alignment of some types (namely 'short's) was still not being correctly detected on some Crays. Solution: Revert part of last change which accidentally got the offset of 'short's wrong on Crays Correct check for alignment of 'short's on Crays. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest Cray SV1 (wind) Cray T3E (hubble) Cray T90 (gypsy)
* [svn-r7096] Purpose:Quincey Koziol2003-06-241-2/+4
| | | | | | | | | | | | | | | | | | Bug fix Description: Aligned data is not being detected by type conversion routines correctly on some Crays, causing corrupted data during I/O. Solution: Add extra checking for strange pointer behavior on Crays. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest Cray SV1 (wind) Cray T3E (hubble) Cray T90 (gypsy)
* [svn-r7094] Purpose:Quincey Koziol2003-06-241-1/+1
| | | | | | | | | | | | | | Bug fix Description: Change final "long" to "long double" in native floating-point check. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest Cray SV1 (wind) Cray T3E (hubble) Cray T90 (gypsy)
* [svn-r7084] Purpose:Quincey Koziol2003-06-231-17/+29
| | | | | | | | | | | | | | | | | | | Bug fix Description: Alignment on Cray SV1 machine was not being detected correctly and was not aligning integer types correctly for type conversion, nor was detecting the proper internal offset of the data in a 'short' type. Solution: Added more checks to detect way Cray aligns pointers in addition to current checks. Corrected 'offset' detection on big-endian machines. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7083] Purpose:Quincey Koziol2003-06-231-2/+7
| | | | | | | | | | | | Bug fix Description: Tighten up checks on "index" parameter to H5Aiterate to disallow negative values and values greater than the number of attributes on an object. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7082] Purpose:Quincey Koziol2003-06-231-5/+12
| | | | | | | | | | | | | | | Bug fix (backward compatibility) Description: Track changes to allow H5Giterate to pass along iterator callback's return value Also, improve range checking on "index" parameter to disallow invalid starting indices (<0 or > the number of objects in a group). Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7080] Purpose:Quincey Koziol2003-06-236-55/+50
| | | | | | | | | | | | | | | | | Bug fix (backward compatibility) Description: Changes we've made during development of the 1.5.x branch had broken the feature of allowing user's callbacks to H5Giterate to return a value through the library back to the application which called H5Giterate. Solution: Correctly pass along iterator callback return value and adjust internal library code to conform to this design. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7074] Purpose:Quincey Koziol2003-06-201-2/+2
| | | | Bump version # after another private snapshot for SAF team.
* [svn-r7072] Purpose:Quincey Koziol2003-06-201-15/+16
| | | | | | | | | | | | | | | | | | | Bug fix & code cleanup Description: The H5F_get_objects_cb was returning SUCCEED (i.e. 0) to indicate that the ID iterator should exit early, but the ID iterator needs a non-zero return from a callback to exit early. Also, track change to ID iterator "operator data" to be non-const Solution: Changed H5F_get_objects_cb() to return "TRUE" instead, to indicate an early exit for the ID iterator. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7071] Purpose:Quincey Koziol2003-06-205-9/+8
| | | | | | | | | | | Code cleanup Description: Tweak internal iterator over IDs to not require constant "operator" data. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7070] Purpose:Quincey Koziol2003-06-201-1/+3
| | | | | | | | | | | | Code cleanup Description: Add another dependency to the API shutdown code to not shut down the ID management code until the other APIs which use IDs are shut down. Platforms tested: FreeBSD 4.8 (sleipnir) h5committest
* [svn-r7061] Purpose:Quincey Koziol2003-06-181-2/+2
| | | | Bump version # after creating private snapshot.
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