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hdf5_1_8
* commit '8c2d4c354413d4f3578aa30cf28ee4c4f5c137cf':
Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Modifications made based on pull request (#485) comments.
Incorporate additional code changes for the H5DOread_chunk patch from GE healthcare (HDFFV-9934) Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
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healthcare (HDFFV-9934)
Modifications made based on pull request (#485) comments.
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healthcare (HDFFV-9934)
Incorporate the code changes that were missing from the original patch:
(1) Additional tests in hl/test/test_dset_opt.c
(2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty
Tested on playtpus, ostrich, kituo, mayll, osx1010test, quail, emu.
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and other changes to Makefiles and config/conclude.am to eliminate
link errors with new libdynlib*_la_LDFLAGS which were added to stop
libdynlib* files linking to external libraries.
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* commit '5c4aeef7ff5845a98f4fea5d2be74aa258cd1562':
Fix illegal references for sanity checks. Correct illegal references for HDassert() checks when in debug mode. Tested on emu, osx1010test, mayll, kituo, ostrich.
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Correct illegal references for HDassert() checks when in debug mode.
Tested on emu, osx1010test, mayll, kituo, ostrich.
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* commit '043aabe8cbd1abcc41ea2fb887b3a8ddd706500c':
Made corrections according to code review. 1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c 2) Remove extra line in src/H5Dpkg.h 3) Add one more test to hl/test/test_dset_opt.c Tested on mayll and osx1010test.
Incorporate patch from GE Heathcare (HDFFV-9934) 1) Integrate the patch 2) Fix bugs when debugging the patch 3) Add test to hl/test/test_dset_opt.c Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
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1) Change fprintf to HDfprintf in hl/test/test_dset_opt.c
2) Remove extra line in src/H5Dpkg.h
3) Add one more test to hl/test/test_dset_opt.c
Tested on mayll and osx1010test.
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1) Integrate the patch
2) Fix bugs when debugging the patch
3) Add test to hl/test/test_dset_opt.c
Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
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Fixed Conflicts:
MANIFEST
test/plugin.c
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Populate the fix for HDFFV-9697: Fix for unknown message from develop branch.
Tested on ostrich, platypus, kite, quail, osx1010test, emu, mayll, moohan, kituo.
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Fix for HDFFV-10141.
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Fixes HDFFV-10141.
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snapshot release. (Changed daily test command to add specific files for commit instead of all new and modified files.)
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snapshot release.
Add 2 test files to testfiles to be removed list in hl/test/Makefile.am.
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Fixes HDFFV-10110.
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(HDF5 1.8.18 release changes)
Update HISTORY-1_8.txt and RELEASE.txt files.
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Update version to 1.8.18-pre2.
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Update autotools and libtool versions.
Run bin/reconfigure.
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* commit '394c6b8c3a4c781c1ee877f969a146cece3d7831':
Add missing EXPORT tag in install command
Fix typo and remove test only tools from exports
Add namespace and export utils
HDFFV-9961: Merge GIT ext lib option to 1.8
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* commit '8b4633e99d6e447327526663acd30352b5840446': (29 commits)
Correct usuage of cmake variable
Correct name of windows variable
Add STGZ to cpack generator list for OSX
Add missing exists check from master project
Check file length before compare
Change check for number of dimensions for old-style arrays in datatype decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
Fix mistakes in porting TALOS-177 fix to 1.8.
Fix bug in "nooptype" decode in fix for TALOS-0177.
Fix issues in H5Znbit.c where the decompression algorithm would not check the compressed data for validity, potentially causing a buffer overflow.
Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of.
HDFFV-9991: Remove unneeded file
Add new test file to MANIFEST
Fix error reporting
Update new test file references
revert merge change to cleanup files
Fix incorrect use of H5Rdereference2
remove merge typo
Remove unsupported function
Merge/align from trunk(develop)
Merge/align with trunk
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decoding routine from an assertion to an if/HGOTO_ERROR check, since it is inappropriate to assert the contents of a file will be what we expect.
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