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* VOL FEATUREDana Robinson2018-10-1091-1742/+13541
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* Updated the H5I debug dump to not segfault when types are not initializedDana Robinson2018-10-061-9/+16
| | | | or contain zero IDs in the skip list.
* The H5I debug ID dump function is now always available insteadDana Robinson2018-10-062-26/+18
| | | | of hidden behind an H5_DEBUG_OUTPUT ifdef.
* TRILABS-34 improve cross compile with emulatorAllen Byrne2018-10-041-4/+4
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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Dana Robinson2018-09-241-31/+64
|\ | | | | | | | | | | | | | | | | | | * commit '2618dc314b9e4875e6ece7ee8696846ac2d02183': Remove extra unneeded Remove libsettings from pregenerated block CMake changes for SKIPPED and flush tests Correct $withval usage in configure HDFFV-10332 Adjust checks and generation of files HDFFV-10332 Use pre-generated files
| * Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-09-2450-1697/+1676
| |\ | | | | | | | | | | | | | | | | | | * commit 'e96bd2d46e208e0eb6c62cfcc4f86141f933884e': CMake changes for SKIPPED and flush tests H5S adjust callbacks now return an herr_t instead of void. Normalization with vol_integration (property lists, file drivers, other misc).
| * | Remove extra unneededAllen Byrne2018-09-241-11/+7
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| * | Remove libsettings from pregenerated blockAllen Byrne2018-09-241-40/+27
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| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-09-2449-1160/+1066
| |\ \ | | | | | | | | | | | | | | | | * commit '5c99d4e4df67699b81f1323e27a4df935d90e465': Normalization with vol_integration (misc internal and datatype)
| * \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-09-2129-308/+286
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'f03758613a6ec83e5ddd664590d162ccc888f13e': Snapshot version 1.11 release 2. Normalization with vol_integration (test code and H5Xtest.c)
| * \ \ \ Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-09-209-552/+538
| |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'bbafe0debae9886988e4b7ec31bb8ef7292e43f9': Remove extra constant Fix typo Add Constants to all ERR STK checks Use constants for test comparisons Develop normalization with vol_integration. Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
| * | | | | HDFFV-10332 Adjust checks and generation of filesAllen Byrne2018-09-191-21/+52
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| * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-09-1931-2008/+312
| |\ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'ec53237fb849042b4a5b276a3e66a98ebb3710ee': Removed 'VOL' versions of FUNC_ENTER macros as well as empty functions orginally intended to support the full SWMR feature.
| * | | | | | HDFFV-10332 Use pre-generated filesAllen Byrne2018-09-181-45/+64
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* | | | | | | Remainder of vol_normalization changes (dataset, attribute, files, objects).Dana Robinson2018-09-2469-3261/+3438
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* | | | | | H5S adjust callbacks now return an herr_t instead of void.Dana Robinson2018-09-248-29/+31
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* | | | | | Normalization with vol_integration (property lists, file drivers,Dana Robinson2018-09-2142-1668/+1645
| |_|_|_|/ |/| | | | | | | | | | | | | | other misc).
* | | | | Merge branch 'develop' of ↵Dana Robinson2018-09-201-2/+2
|\ \ \ \ \ | | |_|_|/ | |/| | | | | | | | https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into develop
| * | | | Merge branch 'develop' of ↵hdftest2018-09-2028-306/+284
| |\ \ \ \ | | | | | | | | | | | | | | | | | | ssh://bitbucket.hdfgroup.org:7999/~hdftest/hdf5_hft into develop
| * | | | | Snapshot version 1.11 release 2.hdftest2018-09-201-2/+2
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* | | | | Normalization with vol_integration (misc internal and datatype)Dana Robinson2018-09-2049-1160/+1066
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* | | | Normalization with vol_integration (test code and H5Xtest.c)Dana Robinson2018-09-2028-306/+284
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* | | Merge pull request #1245 in HDFFV/hdf5 from ↵Dana Robinson2018-09-199-552/+538
|\ \ \ | |_|/ |/| | | | | | | | | | | | | | ~DEROBINS/hdf5_der:develop_pull_request to develop * commit 'eb78fd88325d58a95c026129f1e2b4c7c50f621a': Develop normalization with vol_integration. Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
| * | Develop normalization with vol_integration.Dana Robinson2018-09-199-552/+538
| | | | | | | | | | | | | | | Mostly peripheral things like the tools and wrappers, with just enough core library code to support that.
* | | Merge pull request #1244 in HDFFV/hdf5 from ↵Dana Robinson2018-09-1931-2008/+312
|\ \ \ | |/ / | | / | |/ |/| | | | | ~DEROBINS/hdf5_der:develop_pull_request to develop * commit '680cf4d946fd10d50e0f7acdc5bc93f91037fb4f': Removed 'VOL' versions of FUNC_ENTER macros as well as empty functions orginally intended to support the full SWMR feature.
| * Removed 'VOL' versions of FUNC_ENTER macros as well as empty functionsDana Robinson2018-09-1831-2008/+312
| | | | | | | | orginally intended to support the full SWMR feature.
* | Fix whitespace and exit statusAllen Byrne2018-09-182-276/+227
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* | HDFFV-9059 take file as argumentAllen Byrne2018-09-181-2/+2
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* | HDFFV-9059 Allow detect to take a file as an argumentAllen Byrne2018-09-183-515/+458
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* Remove now-unused local variableJordan Henderson2018-08-261-3/+0
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* Add fix for HDFFV-10501Jordan Henderson2018-08-261-14/+1
| | | | | Add test for HDFFV-10501 fix Add release note for HDFFV-10501 fix
* Merge pull request #1167 in HDFFV/hdf5 from ↵Jordan Henderson2018-08-025-22/+79
|\ | | | | | | | | | | | | | | | | | | ~JHENDERSON/hdf5:bugfix/MPI2_only_fixes to develop * commit '9aa2eaeb9ed9c94f63973cb55f13de256558497c': Add Autotools and CMake checks for big I/O MPI-3 functions Add hdf5settings section for parallel compression status in CMake builds Switch to CheckSymbolExists in CMake Add configure check for MPI_Mprobe and MPI_Imrecv functions
| * Add Autotools and CMake checks for big I/O MPI-3 functionsJordan Henderson2018-07-311-0/+1
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| * Add configure check for MPI_Mprobe and MPI_Imrecv functionsJordan Henderson2018-07-265-22/+78
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add line to libhdf5settings file for status of Parallel writes to filtered datasets status Surround Parallel Compression code in MPI_VERSION >= 3 checks Add disabled message for Parallel Compression built w/ MPI-2 Modify Parallel Compression tests to only run the parallel filtered read tests when parallel filtered writes are disabled Update big I/O code to handle being built with MPI-2 Add checks to CMakeLists.txt for MPI_Mprobe and MPI_Imrecv
* | Add quotes to places where MPI_C_LIBRARIES are linked againstJordan Henderson2018-07-271-4/+4
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* Fix for HDFFV-9277: update the ainfo message after removing an attribute.Vailin Choi2018-07-201-3/+6
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* Merge branch 'develop' of ↵Larry Knox2018-07-1883-356/+481
|\ | | | | | | https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop
| * Removed white spaceBinh-Minh Ribler2018-07-171-1/+2
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| * Fixed HDFFV-10476, HDFFV-10478, HDFFV-10480Binh-Minh Ribler2018-07-173-4/+11
| | | | | | | | | | | | | | | | | | Description: Fixed potential out of bound read and NULL pointer dereferences. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
| * Merge pull request #1134 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp4:develop ↵Binh-Minh Ribler2018-07-163-24/+36
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop Fixed HDFFV-10481 and HDFFV-10477 * commit '83ca39ba9a2d6852dd7754b533f7839e9d2a0107': Combined macro lines as Dana commented Platforms tested: Linux/64 (jelly) (very minor) Fixed division-by-zero issues Description: Fixed HDFFV-10481 and HDFFV-10477, division by 0. Fixed another occurrence beside what were reported. Also, changed a local variable to avoid an unnecessary cast. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
| | * Combined macro lines as Dana commentedBinh-Minh Ribler2018-07-163-6/+3
| | | | | | | | | | | | | | | Platforms tested: Linux/64 (jelly) (very minor)
| | * Fixed division-by-zero issuesBinh-Minh Ribler2018-07-163-24/+39
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Fixed HDFFV-10481 and HDFFV-10477, division by 0. Fixed another occurrence beside what were reported. Also, changed a local variable to avoid an unnecessary cast. Platforms tested: Linux/64 (jelly) Linux/32 (jam) Darwin (osx1010test)
| * | Fix evaluation of __has_attribute(no_sanitize_address) on older GCC versionsJerome Soumagne2018-07-161-3/+7
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| * | Merge pull request #1112 in HDFFV/hdf5 from ↵Jerome Soumagne2018-07-161-7/+5
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | ~JSOUMAGNE/hdf5_fork:gcc_sanitize to develop * commit '5afeefe1bae62fa5faf06c0c6f240e10863a2693': Fix H5detect to use no_sanitize_address attribute and support GCC sanitizers
| | * | Fix H5detect to use no_sanitize_address attribute and support GCC sanitizersJerome Soumagne2018-06-151-7/+5
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| * | | Merge pull request #1127 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to developJordan Henderson2018-07-162-53/+133
| |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'a8d6f100cdddbfc42d0c4abfeb4ceb8788b1b087': Add note about single chunk caching and serial library Add check for actually using the MPI file driver when caching one chunk Fix error message mentioning wrong MPI function used Fix for HDFFV-10509 Revise H5D__mpio_array_gatherv() to not allocate memory needlessly Add test to continually grow and shrink chunks Changes to test with checksum filter as well as deflate filter Eliminate warning about signed to unsigned conversion Remove unused local variable Fix bug in parallel reads of compressed data Add data verification to parallel filtered compound write tests Add seven of fourteen parallel filtered data partial read tests
| | * | | Add note about single chunk caching and serial libraryJordan Henderson2018-07-131-1/+7
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| | * | | Add check for actually using the MPI file driver when caching one chunkJordan Henderson2018-07-131-1/+15
| | | | | | | | | | | | | | | Better explain rationale behind chunk caching issue fix
| | * | | Fix error message mentioning wrong MPI function usedJordan Henderson2018-07-131-1/+1
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| | * | | Fix for HDFFV-10509Jordan Henderson2018-07-041-2/+15
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