| Commit message (Collapse) | Author | Age | Files | Lines |
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* Also brings over the apostrophe fix
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Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
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* Fix some warnings in developer builds
* Switch approach to Winline flag
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* Subfiling VFD source cleanup (#3241)
* Subfiling VFD source cleanup
Modularize Subfiling CMake code into separate CMakeLists.txt file
Update Mercury util code to latest version and update Copyright
Generate mercury_util_config.h header file instead of using
pre-generated file
Remove unnecessary Mercury functionality
Fix minor warning in Subfiling VFD code
* Remove Mercury headers from Autotools publicly-distributed header list
* Fix CMake builds when Subfiling VFD isn't enabled (#3250)
* Fix CMake builds when Subfiling VFD isn't enabled
* Add Subfiling VFD entry to hdf5-config.cmake.in
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* Remove macros from api tests (#2929)
* Remove macros and undefined callbacks (#2959)
* Remove remaining macros from H5_api_tests_disabled.h (#2968)
* Put some vol capability checks in testpar tests and remove remaining warnings (#2995)
* API tests datatype generation cleanup
* Clean up API tests' random datatype generation and fix bug with enum
datatype generation
* Init parallel API tests with MPI_THREAD_MULTIPLE
* HDF5 API tests - Check VOL connector registration
* Determine whether a VOL connector failed to load before running API
tests
* Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests
* Remove some now-unused macros from H5_api_tests_disabled.h
* Enable HDF5 API tests by default
* Implement CMake option to install HDF5 API tests
* Check for invalid AAPL from H5Acreate
* Enable building of VOL connectors alongside HDF5 in CMake
* Prepend CMake VOL URL option indices with 0s so they come in order
* Don't turn on API tests by default yet
* Document VOL connector FetchContent functionality
* Add release note for API test updates
* Only install testing library if API tests are installed
* Fix grammar
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* Sync fortran src files with develop
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* Fix release action that allows files to be uploaded.
* Add autotools h5copy help test.
* Update cmake tools.cmake file for clang-tidy.
* CMake build is missing H5FDsubfiling.h
* Correct snapshot location
* Add note for issue 3056
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* Update the workflows to changes in develop
* Disable java for error only action
* Fix Fortran doxygen
* add fortran alias
* Merge changes from develop to fix actions
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* Update version
Copy RELEASE.txt from 1.14.1-2 release into HISTORY-1_14.txt
Clear out RELEASE.txt
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* Fix CMake generator expression syntax
* Add missing quotes
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Cherry pick of
ea7dfcd (Change Powershell to PowerShell in docs)
to
4497feb (Update H5Dget_space_status bug note to reference 1.14.0)
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Comment here should be "point", not "hyperslab".
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(#2679) (#2728)
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(#2725)
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* Fix for github issue #2599:
As indicated in the description, memory leak is detected when running "./h5dump pov".
The problem is: when calling H5O__add_cont_msg() from H5O__chunk_deserialize(),
memory is allocated for cont_msg_info->msgs. Eventually, when the library tries to load
the continuation message via H5AC_protect() in H5O_protect(), error is
encountered due to illegal info in the continuation message.
Due to the error, H5O_protect() exits but the memory allocated for cont_msg_info->msgs is not freed.
When we figure out how to handle fuzzed files that we didn't generate,
a test needs to be added to run h5dump with the provided "pov" file.
* Add message to release notes for the fix to github issue #2599.
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* Avoid suppressing error output for non-tentative file opens
* Update comment about tentative file opens
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* Convert asserts to error handling in efl decode
The function that decodes external data files object header messages
would call assert() when parsing malformed files, causing applications
to crash when linked against the debug library.
This change converts these assert() calls to HDF5 error checks, so
the messages are sanity checked in both release and debug mode and
debug mode no longer crashes applications.
Also cleaned up some error handling usage and debug checks.
* Free memory on H5O efl decode errors
* Add buffer size checks to efl msg decode
* Add parentheses to math expressions
Fixes GitHub #2605
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* Enclose MESG in do...while loop (#2576)
Enclose MSG macro in a do...while loop
* Add a clang-format comment about permissions (#2577)
* Remove an obsolete comment from the MDS test (#2578)
The seed is now broadcast from rank 0, so the warning about multiple
machines having different seeds is unnecessary.
* Subfiling VFD - fix issues with I/O concentrator selection strategies (#2571)
Fix multiple bugs with the SELECT_IOC_EVERY_NTH_RANK and
SELECT_IOC_TOTAL I/O concentrator selection strategies and add a
regression test for them
* Check for overflow when calculating on-disk attribute data size (#2459)
* Remove duplicate code
Signed-off-by: Egbert Eich <eich@suse.com>
* Add test case for CVE-2021-37501
Bogus sizes in this test case causes the on-disk data size
calculation in H5O__attr_decode() to overflow so that the
calculated size becomes 0. This causes the read to overflow
and h5dump to segfault.
This test case was crafted, the test file was not directly
generated by HDF5.
Test case from:
https://github.com/ST4RF4LL/Something_Found/blob/main/HDF5_v1.13.0_h5dump_heap_overflow.md
---------
Co-authored-by: glennsong09 <43005495+glennsong09@users.noreply.github.com>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: jhendersonHDF <jhenderson@hdfgroup.org>
Co-authored-by: Egbert Eich <eich@suse.com>
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(#2571) (#2618)
Fix multiple bugs with the SELECT_IOC_EVERY_NTH_RANK and
SELECT_IOC_TOTAL I/O concentrator selection strategies and add a
regression test for them
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Co-authored-by: Mark (he/his) C. Miller <miller86@llnl.gov>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
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Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
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(#2512) (#2566)
Forward port of 9f252f1 from #2329
Co-authored-by: Mark Kittisopikul <mkitti@users.noreply.github.com>
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* Fix new codespell issues
* Have codespell ignore ./config/sanitizer/sanitizers.cmake
Co-authored-by: Mark Kittisopikul <mkitti@users.noreply.github.com>
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* Merge doxygen plist tables changes from develop
* Doxy corrections
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* Merge Correct pkgconfig variables and libraries #290
* Fix typo
* Fix spacing
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* Correct VERS compatible
* Remove FAIL check in CMake test
* Remove unnecessary value in vers array
* revert empty list
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