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* [svn-r28715] - merge from trunkMohamad Chaarawi2015-12-21130-2972/+3995
|\ | | | | | | - fix farray, earray, and btree test to use correct function to retrieve internal file struct.
| * [svn-r28710] Description:Quincey Koziol2015-12-197-145/+162
| | | | | | | | | | | | | | | | | | | | | | | | Bring r28708 from revise_chunks branch: Fix earray, farray and btree2 use of incorrect file pointer when two files are opened and used to access the data structure. Misc. minor code cleanups as well. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel h5committest forthcoming
| * [svn-r28702] Description:Quincey Koziol2015-12-171-1/+1
| | | | | | | | | | | | | | Fix typo in comment. Tested on: (Unneeded)
| * [svn-r28696] Minor normalization with revise_chunks.Dana Robinson2015-12-171-0/+1
| | | | | | | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
| * [svn-r28663] Merge of r28662 from revise_chunks.Dana Robinson2015-12-151-1/+2
| | | | | | | | Whitespace only.
| * [svn-r28646] Minor normalization with revise_chunks.Dana Robinson2015-12-1420-57/+11
| | | | | | | | | | | | | | | | | | Also purged obsolete /*ARGSUSED*/ from the library. Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28643] Add H5D_t pointer to chunk callback.Dana Robinson2015-12-143-8/+9
| | | | | | | | | | | | | | | | | | Normalization for future single chunk indexing. Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28629] Minor normalization with revise_chunks.Dana Robinson2015-12-143-24/+18
| | | | | | | | | | | | | | Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28626] Brought VFD-level file locking code over from revise_chunks.Dana Robinson2015-12-1411-45/+720
| | | | | | | | | | | | | | Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28624] Minor normalization of H5FA package with revise_chunks.Dana Robinson2015-12-1410-427/+417
| | | | | | | | | | | | | | Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28620] Minor normalization of H5HL package with revise_chunks.Dana Robinson2015-12-142-6/+7
| | | | | | | | | | | | | | Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28616] Normalization of H5HL package with revise_chunks.Dana Robinson2015-12-1411-924/+1028
| | | | | | | | | | | | | | | | | | NOTE: Flush dependency code was not moved. Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 w/ CMake 3.3.2 serial only (Autotools and CMake since new files were added) (these changes have been in revise_chunks for a long time)
| * [svn-r28614] Normalization of H5FS package with revise_chunks.Dana Robinson2015-12-149-477/+395
| | | | | | | | | | | | | | | | | | Mostly minor fixes like warnings, etc. Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28612] Normalization of H5G package with revise_chunks.Dana Robinson2015-12-148-23/+25
| | | | | | | | | | | | | | | | | | Mostly minor fixes like warnings, etc. Tested on: Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only (these changes have been in revise_chunks for a long time)
| * [svn-r28606] Description:Quincey Koziol2015-12-1324-273/+267
| | | | | | | | | | | | | | | | | | | | Revisions to normalize revise chunks vs. trunk, plus push dataset metadata changes into the cache immediately (instead of holding them within the dataset data structures). Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r28581] Brought flock changes over from revise_chunks as well as a fewDana Robinson2015-12-113-2/+186
| | | | | | | | | | | | | | minor tweaks from H5private.h. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only, autotools and CMake (3.3.2)
| * [svn-r28533] Fix loops in H5Dvirtual.c to only loop over used entries in VDS ↵Neil Fortner2015-12-071-3/+3
| | | | | | | | | | | | | | | | mapping list, instead of all allocated entries. Tested: ummon (too minor for full h5committest)
| * [svn-r28499] Correct working dirAllen Byrne2015-12-031-1/+1
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| * [svn-r28497] Avoid race condition on creating same source file.Allen Byrne2015-12-031-4/+21
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| * [svn-r28452] Description:Quincey Koziol2015-11-2315-65/+60
| | | | | | | | | | | | | | | | Normalization changes against revise_chunks branch. Tested on: MacOSX/64 10.11.1 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r28422] Description:Quincey Koziol2015-11-2024-419/+584
| | | | | | | | | | | | | | | | | | | | Revert most of r27549, since revise_chunks code requires debugging contexts for v2 B-trees. Also, misc. warning cleanups and alignments w/changes on revise_chunks branch. Tested on: MacOSX/64 10.11.1 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r28416] Description:Quincey Koziol2015-11-203-67/+76
| | | | | | | | | | | | | | | | | | Refactor time conversion code to put all the system-specific changes into one routine, H5_make_time, in H5system.c. Tested on: MacOSX/64 10.11.1 (amazon) w/serial & parallel (h5committest forthcoming)
| * [svn-r28346] Description:Quincey Koziol2015-11-151-10/+10
| | | | | | | | | | | | | | | | Bring in cleanups from revise_chunks branch. Tested on: MacOSX/64 10.11.1 (amazon) w/serial & parallel (too minor to require full h5committest)
| * [svn-r28311] Description:Quincey Koziol2015-11-091-0/+1
| | | | | | | | | | | | | | | | Add missing callback to virtual layout "class" structure. Tested on: MacOSX/64 10.11.1 (amazon) w/serial & parallel (Too minor to require h5committest)
* | [svn-r28288] merge from trunk.Mohamad Chaarawi2015-11-0515-71/+97
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| * [svn-r28285] move private H5G_get_create_plist from public source file to ↵Mohamad Chaarawi2015-11-052-95/+94
| | | | | | | | internal one.
| * [svn-r28241] Correct prototype return signature.Allen Byrne2015-10-281-1/+1
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| * [svn-r28236] Rework get timezone function to add another exclusion define ↵Allen Byrne2015-10-273-5/+17
| | | | | | | | | | | | | | (H5_HAVA_TM_GMTOFF). Also needed to add prototype - followed lead of HDrand. Tested linux and windows
| * [svn-r28234] Changed a C++-style comment to C-style.Dana Robinson2015-10-271-4/+6
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| * [svn-r28229] HDFFV-9550: Rework timezone usage to localize the #ifdef blocks ↵Allen Byrne2015-10-263-17/+32
| | | | | | | | to a HDget_timezone function.
| * [svn-r28228] Remove WIN32 only config of threadsafeAllen Byrne2015-10-261-0/+1
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| * [svn-r28204] Fix use of hbool_t in H5FDmulti (revert previous fix and use ↵Jerome Soumagne2015-10-231-3/+3
| | | | | | | | | | | | unsigned instead) Tested on: Sun OS 5.11/64 (emu)
| * [svn-r28196] Fix use of hbool_t in H5FDmultiJerome Soumagne2015-10-231-2/+2
| | | | | | | | Tested on: Sun OS 5.11/64 (emu)
| * [svn-r28193] Rework VS2015 timezone patch for better fit to standards.Allen Byrne2015-10-222-13/+21
| | | | | | | | Tested: VS2015 VMs
| * [svn-r28174] HDFFV-9550: Add VS2015 fix for timezone.Allen Byrne2015-10-211-0/+7
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| * [svn-r28151] Fix memory leak in dtransform test (encountered when parsing an ↵Neil Fortner2015-10-201-0/+1
| | | | | | | | | | | | | | | | invalid transform). Tested: koala, ostrich (h5committest)
| * [svn-r28138] Add first support for _Bool and make hbool_t a "real" _Bool if ↵Jerome Soumagne2015-10-206-5/+21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | available Fix tests accordingly and fix misuse of hbool_t in various places Fix initialization of H5Pgcpl/ocpl structs in property decoding routines Tested on: Linux/32 (jam) Linux/64 (platypus) Linux/PPC64 (ostrich) MacOSX/64 10.11
| * [svn-r28132] Cleanup cmake output of HDF5_GENERATE_HEADERS perl scriptJerome Soumagne2015-10-191-3/+6
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| * [svn-r28053] Change file generation from build time to cmake time.Allen Byrne2015-10-131-47/+7
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| * [svn-r28024] Description:Quincey Koziol2015-10-101-0/+1
| | | | | | | | | | | | | | | | | | Clear buffer for driver info block before writing it to the file. (Avoids 'uninitialized memory read' warning from valgrind) Tested on: MacOSX/64 10.10.5 (amazon) w/serial & valgrind (too minor for h5committest)
| * [svn-r28015] Decription:Quincey Koziol2015-10-091-1/+1
| | | | | | | | | | | | | | | | Clean up memory leak when generating group creation property list for user. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & valgrind Linux/64 4.1.8 (Jerome's laptop) w/serial & valgrind
| * [svn-r27968] Modified version number to 1.9.233 before creating a tar ball ↵Elena Pourmal2015-10-061-2/+2
| | | | | | | | for DLS.
* | [svn-r27991] remove unused top var initializer.Mohamad Chaarawi2015-10-071-2/+0
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* | [svn-r27990] fix some warnings.Mohamad Chaarawi2015-10-071-5/+5
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* | [svn-r27972] merge from trunk.Mohamad Chaarawi2015-10-0635-207/+6513
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| * [svn-r27957] Description:Quincey Koziol2015-10-051-23/+12
| | | | | | | | | | | | | | | | Minor whitespace cleanups. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27956] Description:Quincey Koziol2015-10-052-5/+5
| | | | | | | | | | | | | | | | Minor code cleanups, preparing to merge to trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27946] Brought VDS branch in sync with trunk (up to r27945).Dana Robinson2015-10-0411-113/+149
| |\ | | | | | | | | | | | | | | | | | | | | | Tested on Ubuntu 15.04 (Linux 3.19 x86_64), gcc 4.9.2, MPICH 3.1.4 and CMake 3.3.2. - Autotools serial w/ Fortran, C++ - Autotools parallel w/ Fortran - CMake serial w/ Fortran, C++
| | * [svn-r27939] Remove H5D__iterate and use H5S_select_iterate directlyJerome Soumagne2015-10-026-69/+97
| | | | | | | | | | | | | | | Add internal library callback to H5S_select_iterate to avoid having to pass hid_t objects internally
| | * [svn-r27938] Fix private/public H5A_get_type and H5A_get_spaceJerome Soumagne2015-10-024-38/+49
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