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* [svn-r18996] Updated config files and install commands per external ↵Allen Byrne2010-06-141-7/+1
| | | | | | developers recommendations. Tested: local linux
* [svn-r18965] Windows use of VC_EXTRALEAN no longer did anything. It has been ↵Allen Byrne2010-06-031-1/+5
| | | | | | | | replaced by WIN32_LEAN_AND_MEAN macro. This was the cause of a define conflict causing the use of grp1 and grp2 to be replaced with constants in the h5dumpgentest.c file. This also affected the use of the #include <winsock.h> needed by gethostname. The new include: winsock2.h has been added to h5private.h and either removed or updated in the other files. Tested: Windows
* [svn-r18922] Fix for failures for test/mf.c on windows:Vailin Choi2010-05-282-1/+8
| | | | | 1. H5FD_stdio_truncate() windows code: need to do a rewind 2. Make sure fsinfo.fs_addr is initialized before creating the message.
* [svn-r18917] Description:Quincey Koziol2010-05-2726-398/+264
| | | | | | | | | | | | | | | | | | | | | | | | Bring r18911 (plus some adaptions to match the code on the trunk) from the metadata journaling "merging" branch to the trunk: More general changes to align trunk with eventual changes from metadata journaling branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18908] Corrected name of cstub libraries (needed to be lowercase)Allen Byrne2010-05-261-5/+5
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* [svn-r18894] Purpose: Improve allocation performance of filtered datasets ↵Neil Fortner2010-05-257-70/+92
| | | | | | | | | | | | | with non-default VL fill values. Description: Previously, H5D_chunk_allocate would, if a dataset were filtered and had a non-default VL fill value, allocate a new buffer for every chunk. Changed H5D_chunk_allocate to reuse the existing buffer if possible. Also other miscellaneous cleanup. Tested: jam, linew, amani (h5committest)
* [svn-r18890] Update CMake fortran configure/build with changes from community.Allen Byrne2010-05-251-0/+2
| | | | | | | | - Add an install rule to copy compiled fortran module files - Only build the xlatefile utility if testing and tools are enabled - Don't do MPI HAVE_XXX checks until MPI_FOUND is true - Install needs H5version.h & H5overflow.h to be copied - Add debug information flags to debug compile and link lines for win32 Intel compiler
* [svn-r18871] Description:Quincey Koziol2010-05-211-8/+8
| | | | | | | | | Clean up compiler warnings (on Windows, I hope) by marking some routines as taking 'volatile' parameters. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor for h5committest)
* [svn-r18868] Purpose: Fix bug in dataset shrinking algorithmNeil Fortner2010-05-202-214/+292
| | | | | | | | | | | | | | | | Description: Previously, it was possible for a chunk to be flushed due to chunk operations in the callback from H5B_iterate in H5D_chunk_prune_by_extent. Because flushing the chunk can force it to be reallocated if it is filtered, this can change the contents of the chunk b-tree in the middle of H5B_iterate. Because H5B_iterate uses a locally cached copy of the b-tree, this causes subsequent operations to be passed incorrect data. Rewrote H5D_chunk_prune_by_extent to avoid H5B_iterate entirely. Also fixed a bug in the dataset expand algorithm that could cause extra chunks to be created. Tested: jam, linew, smirom (h5committest)
* [svn-r18864] Description:Quincey Koziol2010-05-2016-1143/+125
| | | | | | | | | | | | | | | | | | | | General cleanups to align metadata journaling branch and trunk Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18856] Added CPack commands for installtion programAllen Byrne2010-05-191-3/+5
| | | | Tested: local linux and Windows
* [svn-r18837] Description:Quincey Koziol2010-05-1814-255/+213
| | | | | | | | | | | | | | | | | | | | | | Remove the size parameter from H5[A]C_unprotect() and the H5[A]C__SIZE_CHANGED_FLAG, switching all clients & tests over to using H5[A]C_resize_entry appropriately. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18834] Description:Quincey Koziol2010-05-171-1/+2
| | | | | | | | | Correct function enter macro and add 'done' label, for routine that is only invoked when configured with --enable-debug=all. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug & production (too minor to require h5committest)
* [svn-r18832] Description:Quincey Koziol2010-05-171-1/+1
| | | | | | | | Correct error where variable didn't always get initialized correctly. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug & prod Windows w/debug & prod
* [svn-r18827] Description:Quincey Koziol2010-05-171-1/+1
| | | | | | | | Correct error where variable didn't always get initialized correctly. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug & prod Windows w/debug & prod
* [svn-r18823] Snapshot version 1.9 release 69HDF Tester2010-05-162-3/+3
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* [svn-r18804] Purpose:Mike McGreevy2010-05-144-0/+65
| | | | | | | | | | | | | Fix memory leaks Description Added a routine to free memory which addresses a memory leak when variable length strings are used as fill values. Tested: h5committest and valgrind (on jam/amani) to confirm freed memory.
* [svn-r18799] Description:Quincey Koziol2010-05-131-0/+3
| | | | | | | Added note about use of volatile for variables. Tested on: None - trivial change to comment.
* [svn-r18793] Add files to support building library with CMakeAllen Byrne2010-05-131-0/+722
| | | | Tested: Local linux
* [svn-r18791] Description:Quincey Koziol2010-05-131-4/+3
| | | | | | | | | | | | | | | | | | | | | Correct error in H5C_resize_entry() where protected entry sizes were not updated if the entry being resized was both pinned and protected. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18765] Corrected typo in Fortran CStub DLL sectionAllen Byrne2010-05-111-1/+1
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* [svn-r18761] File needed to correctly set new H5TOOLS_* export/import attributeAllen Byrne2010-05-111-0/+281
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* [svn-r18740] Description:Quincey Koziol2010-05-078-62/+57
| | | | | | | | | | | | | | | | | | | | | | | Bring r18738 from metadata journaling 'merging' branch to trunk: Switch H5AC_resize_pinned_entry() to work on protected entries as well, and rename to H5AC_resize_entry() Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18725] Description:Quincey Koziol2010-05-0615-207/+154
| | | | | | | | | | | | | | | | | | | | | | Bring r18724 from metadata journaling 'merging' branch to trunk: Rename H5[A]C_rename to H5[A]C_move_entry. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18721] Description:Quincey Koziol2010-05-0617-232/+36
| | | | | | | | | | | | | | | | | | | | | | | | | Bring r18720 from metadata journaling merging branch to trunk: Bring changes from metadata journaling branch to 'merging' branch: Rename H5[A]C_mark_pinned_or_protected_entry_dirty() to H5[A]C_mark_entry_dirty() and get rid of H5[A]C_mark_pinned_entry_dirty(). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18716] Description:Quincey Koziol2010-05-0522-102/+147
| | | | | | | | | | | | | | | | | | | | | | Bring r18715 from metadata journaling merging branch to trunk: Changes to further align trunk with state of metadata journaling branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18709] Purpose:Mike McGreevy2010-05-053-2/+8
| | | | | | | | | | | | | | | | | | | | | | | | | Improve configure's large-file support control. Description: Modified configure to now attempt to add defines necessary for supporting largefiles on all systems, instead of solely on linux. This is in response to user requests to enable largefile support on Solaris by default, as well as to give extra control on AIX (instead of just jamming the necessary flag into the config files). The old --enable-linux-lfs flag has been removed in favor of the --enable-largefile flag (enabled by default), which can be used on all platforms. On systems where large files cannot be supported in this manner, configure will report as such. Tested: h5committest AIX (NCSA's blue_print machine) duty, liberty, and linew.
* [svn-r18702] Description:Quincey Koziol2010-05-0574-696/+1135
| | | | | | | | | | | | | | | | | | | | | | | Bring r18672 from metadata journaling "merging" branch to trunk: Mostly changes to move to only using one 'user data' parameter for calls to H5AC_protect(), along with some minor reformatting code cleanups. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18684] Snapshot version 1.9 release 68HDF Tester2010-05-022-3/+3
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* [svn-r18677] Just mopped up some looseends by using the macro HDxyz instead ↵Albert Cheng2010-04-291-7/+7
| | | | | | | | the xyz function names. Tested: Jam only since this is trivial.
* [svn-r18660] Description:Quincey Koziol2010-04-282-122/+105
| | | | | | | | | Tweak H5detect to be even more careful about its actions, to allow gcc 4.5 to use '-O3'. Also, minor code cleanups in H5Tfloat.c Tested on: FreeBSD/64 6.3 (liberty) w/gcc 4.5 & production mode (h5committest not necessary/appropriate)
* [svn-r18659] Bug: 1764Albert Cheng2010-04-282-65/+203
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: longjmp do not necessary restore signal that is blocked during the signal handling. This caused the Alignment test to fail quietly, resulting in wrong alignment information which will cause failures later. Solution: One can use sigsetjmp/siglongjmp to restore signal handling but not all systems such as Cray XT or VMS supports sigsetjmp. Backup solution is to use sigprocmask to reset the signal. Again, some systems may not support it either. Added code to try the first and then the second solution. Also added tests to verify if the signal_handler routines are working properly. Finally, added code to print results of the verification (in form of comments) to H5Tinit.c for inspection in case of failure. (Note that many platforms do not have alignment limits at all and ALIGNMNET code never raise the SIGBUS or SIGSEGV errors. In those cases, it does not matter whether the signal handlers work or not. Again, this can be deduced from the results comments near the end of the H5Tinit.c. If the sum of signal handlers called equals the total of verify, it means ALIGNMENT does not raise any signals.) For configure.in and configure: Added the test for setjmp, sigsetjmp, sigprocmask which are used by the H5detec.c. Tested: htcommittested, jam(serial).
* [svn-r18657] I added some comments. No test is needed.Raymond Lu2010-04-281-2/+18
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* [svn-r18650] Description:Quincey Koziol2010-04-2729-53/+95
| | | | | | | | | | | | | | | | | | | Bring back various minor tweaks & cleanups from the revise_chunks branch. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r18648] In H5T_get_native_type of H5Tnative.c, I changed the way that ↵Raymond Lu2010-04-272-7/+11
| | | | | | | | | the offset, alignment, and size of nested compound type are calculated by using H5T_cmp_offset. The old way had a bug in it (see bug #1850). Tested on jam. I tested the same change for 1.8 on amani, linew, and jam.
* [svn-r18634] Description:Quincey Koziol2010-04-2711-43/+352
| | | | | | | | | | | | | | | | | | | | | Clean up compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18630] Description:Quincey Koziol2010-04-271-335/+418
| | | | | | | | | | | | | | | | | | | | | | Fix remaining aliasing problems and enable optimizations w/gcc now. This addresses the remaining issues for Bug#1398. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18627] Description:Quincey Koziol2010-04-251-16/+8
| | | | | | | | | | | | | | | | | | | | | | | More progress toward addressing Bz#1398: add 'volatile' keyword to floating- point types when detecting their properties. Also, minor code formatting cleanups. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18625] Description:Quincey Koziol2010-04-233-602/+610
| | | | | | | | | | | | | | | | | | | | | | Checkpoint progress on Bz#1398 - strict aliasing issues. (Lots of compiler warnings & code cleanups also) Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18621] Description:Quincey Koziol2010-04-237-62/+336
| | | | | | | | Clean up compiler warnings. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18618] Description:Quincey Koziol2010-04-229-219/+401
| | | | | | | | | | | | | | | | | | | | | | | | | | | Add new internal object header routines to query the header chunk that a message is in, and to lock/unlock a message into a chunk (so it doesn't get moved into another chunk during allocation/free events). Also, move dataspace message to beginning of object header messages added to a dataset's object header, so it can be locked into chunk #0 (when performing SWMR operations). Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18616] Description:Quincey Koziol2010-04-2225-52/+124
| | | | | | | | Clean up compiler warnings. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18612] Description:Quincey Koziol2010-04-223-1919/+2117
| | | | | | | | Clean up compiler warnings & code formatting Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18610] Description:Quincey Koziol2010-04-222-119/+121
| | | | | | | | Clean up compiler warnings & code formatting issues. Tested on: Mac OS X/32 10.6.3 (amazon) w/debug) (too minor to require h5committest)
* [svn-r18608] Description:Quincey Koziol2010-04-224-54/+65
| | | | | | | | | | | | | | | | | | | Simplify object header allocation routines, and clean up some compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r18600] Description:Quincey Koziol2010-04-206-31/+37
| | | | | | | | | | | | | | | | | | | | | | | Increment reference count on object header when "fake" object header chunk proxy is returned from H5O_chunk_protect(). Also, clean up the interface to H5O_chunk_unprotect by removing the unnecessary 'oh' parameter. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18597] Description:Quincey Koziol2010-04-201-2/+2
| | | | | | | | | | | | | | | | | | | Fix missing NULL initialization of pointers. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.3 (amazon) in debug mode
* [svn-r18595] Description:Quincey Koziol2010-04-2050-325/+596
| | | | | | | | Clean up compiler warnings Tested on: Mac OS X/32 10.6.3 (amazon) w/debug (too minor to require h5committest)
* [svn-r18589] Snapshot version 1.9 release 67HDF Tester2010-04-182-3/+3
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* [svn-r18579] Purpose:Mike McGreevy2010-04-152-22/+22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Autotool Upgrade / Libtool Bug Fix Description: Updated autotools referenced in bin/reconfigure as follows: Autoconf 2.64 --> Autoconf 2.65 Automake 1.11 --> Automake 1.11.1 Libtool 2.2.6a --> Libtool 2.2.6b-mcg The referenced libtool version is a custom version of 2.2.6b. It has been tweaked to fix a bug in libtool that occurs when using PGI 10.0 compilers. A check incorrectly categorizes the C++ compiler as version 1.0 instead of 10.0, and the link line is subsequently set up incorrectly and fails to compile. A patch has been made available and will be included in the next release of libtool, but in the meantime I've applied the patch to a custom installation as indicated above. This bin/reconfigure now references the custom installation, and the resulting configure script will correctly categorize the PGI 10.0 C++ compiler. Ran bin/reconfigure to regenerate configure and makefiles. Tested: jam and amani with PGI 10.0 compilers. h5committest
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