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* Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)hdftest2018-06-1645-1859/+1902
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '87829e06189cd9b29583b5ca8065b52b1f4cd523': (30 commits) HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly Cleaned up H5Fmount/unmount code. Normalization with vol_integration branch. Add fortran MPI to test and example Add mpi include folders for fortran C objects Normalization with the vol_integration branch. Fixed MANIFEST Fix usage of compression lib in shared tests Fix jni function call version Fix the error found after earlier checkin. H5O_info fixes for java and examples Added a RELASE.txt entry for HDFFV-10505. Changed 'deprecated' to indicate 'no longer supported' in the --enable-debug/production configure flags. (1) Made the change according to the pull request feedback. (2) Removed the performance test form test/th5o.c: will decide on what needs to be done to show speedup via HDFFV-10463. Normalize with vol_integration. Removed unused H5MF functions and updated FUNC_ENTER macros and naming in H5MFsection.c. Restored some unused #defines to the deprecated section of H5Dpublic.h. Changes made based on feedback from pull request #1039. ...
| * Merge pull request #1111 in HDFFV/hdf5 from hdf5_1_10.sync to hdf5_1_10Scot Breitenfeld2018-06-1545-1859/+1902
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit '57f64b92d19fed2879ee9bafe1d29bfac865d54c': (30 commits) HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly HDFFV-10405: Using h5fget_obj_count_f with a file id of H5F_OBJ_ALL_F does not work properly Cleaned up H5Fmount/unmount code. Normalization with vol_integration branch. Add fortran MPI to test and example Add mpi include folders for fortran C objects Normalization with the vol_integration branch. Fixed MANIFEST Fix usage of compression lib in shared tests Fix jni function call version Fix the error found after earlier checkin. H5O_info fixes for java and examples Added a RELASE.txt entry for HDFFV-10505. Changed 'deprecated' to indicate 'no longer supported' in the --enable-debug/production configure flags. (1) Made the change according to the pull request feedback. (2) Removed the performance test form test/th5o.c: will decide on what needs to be done to show speedup via HDFFV-10463. Normalize with vol_integration. Removed unused H5MF functions and updated FUNC_ENTER macros and naming in H5MFsection.c. Restored some unused #defines to the deprecated section of H5Dpublic.h. Changes made based on feedback from pull request #1039. ...
| | * Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-149-498/+507
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| | | * Cleaned up H5Fmount/unmount code.Dana Robinson2018-06-071-18/+40
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| | | * Normalization with vol_integration branch.Dana Robinson2018-06-076-252/+232
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| | | * Normalization with the vol_integration branch.Dana Robinson2018-06-063-235/+242
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| | * | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-0438-1365/+1399
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| | | * Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-318-584/+318
| | | |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| | | | * Restored some unused #defines to the deprecated section of H5Dpublic.h.Dana Robinson2018-05-151-1/+13
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| | | | * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-152-85/+78
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| | | | * | * Added H5DO compatibility functions.Dana Robinson2018-05-042-67/+51
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * Changed the offset copy to use an array on the stack. * Yanked some unused #defines.
| | | | * | * Fixed the error testsDana Robinson2018-05-023-89/+136
| | | | | | | | | | | | | | | | | | | | | | | | * Moved common functionality into helper functions
| | | | * | Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-04-3029-1863/+1832
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| | | | * | | Normalize with trunk prior to update mergeDana Robinson2018-04-301-16/+16
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| | | | * | | Fixed a warning.Dana Robinson2018-04-301-1/+1
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| | | | * | | Finished move of H5DOread/write_chunk calls to H5D.Dana Robinson2018-04-305-600/+142
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| | | | * | | First stage of moving H5DOread/write_chunk() to src/ and makingDana Robinson2018-04-302-5/+154
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| | | * | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-3117-412/+426
| | | |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'e8ece625f223032db0d26cfffafc045e4ccdf37d': Normalize with vol_integration.
| | | | * | | | Normalize with vol_integration.Dana Robinson2018-05-2917-412/+426
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| | | * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-305-256/+141
| | | |\ \ \ \ \ | | | | |/ / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * commit 'd184e6db94163dcc8761182744a6c524a4850887': Removed unused H5MF functions and updated FUNC_ENTER macros and naming in H5MFsection.c. Correct script names Fix typo Minor H5FS tweaks. Put back CTRL-L chars Update support link Update text Valgrind fixed by checking for prefix_len of 0
| | | | * | | | Removed unused H5MF functions and updated FUNC_ENTER macros andDana Robinson2018-05-241-206/+91
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | naming in H5MFsection.c.
| | | * | | | | Changes made based on feedback from pull request #1039.Vailin Choi2018-05-144-24/+25
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| | | * | | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Vailin Choi2018-05-1430-1956/+1911
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| | | * | | | | Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-2413-151/+551
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* | | | | | | | Snapshot version 1.10 release 3 (snap2)hdftest2018-06-041-2/+2
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* | | | | | | Updated version to 1.10.3-snap2hdftest2018-05-291-2/+2
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* | | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-253-12/+12
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| * | | | | Minor H5FS tweaks.Dana Robinson2018-05-243-12/+12
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* | | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-231-38/+38
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| * | | | | Put back CTRL-L charsAllen Byrne2018-05-231-52/+52
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| * | | | | Valgrind fixed by checking for prefix_len of 0Allen Byrne2018-05-231-90/+90
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* | | | | Fix for HDFFV-10469: set to latest format for virtual layout encoding.Vailin Choi2018-05-171-4/+32
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* | | | | Fixed libver bounds underscore issueM. Scot Breitenfeld2018-05-115-7/+7
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* | | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-102-85/+78
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| * | | | GGC requires attribute before functionAllen Byrne2018-05-091-20/+20
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| * | | | Correct COMPILE defs usageAllen Byrne2018-05-091-5/+5
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| * | | | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-04-3028-1871/+1833
| |\ \ \ \ | | | |_|/ | | |/| | | | | | | | | | | | | | | | | | | | | | * commit '1f8cb03e11a46f853881f45dac18eff2dd68401e': Fix errors in Makefile.am files that cause "make check" to repeat test, even when there are no changes to source files. (Also add a ggenerated script to the list of files cleaned up on 'make distclean') Further minor cleanups Checkpoint normalization against incoming hyperslab / selection / dataspace improvements.
| * | | | TRILABS-19 Fix missing angle charAllen Byrne2018-04-271-2/+2
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| * | | | TRILABS-19 add mpi libs to utility programsAllen Byrne2018-04-261-4/+4
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| * | | | TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-63/+56
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* | | | removed extraneous lib. ver. bound, PR commentM. Scot Breitenfeld2018-05-101-6/+0
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* | | | temporary fix for HDFFV-10469M. Scot Breitenfeld2018-05-091-101/+1
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* | | | Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-05-08267-17409/+20552
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| * | | Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2018-04-29451-31489/+37928
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| | * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-04-231-11/+2
| | |\ \ | | | |/ | | | | | | | | | | | | * commit 'fa829e322ed44a67e2b3f2d6adf1306ad794859b': Fix non-threadsafe API context head pointer handling.
| | | * Fix non-threadsafe API context head pointer handling.Quincey Koziol2018-04-191-11/+2
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| | * | TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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| | * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Allen Byrne2018-04-183-53/+26
| | |\ \ | | | |/ | | | | | | | | | | | | | | | | * commit 'e217bd113db96b96b485de82395688ca2313918a': Resolve memory leak of last API context, by freeing it in H5CX terminate routine. Revert "Close memory leak of last API context when shutting library down."
| | | * Resolve memory leak of last API context, by freeing it in H5CX terminateQuincey Koziol2018-04-183-35/+11
| | | | | | | | | | | | | | | | routine.
| | | * Revert "Close memory leak of last API context when shutting library down."Quincey Koziol2018-04-182-21/+18
| | | | | | | | | | | | | | | | This reverts commit 0bd3634dc5747d88582a966050896bad57acb892.
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