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error codes in
H5Epublic.h
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Configuration improvement
Problem:
Arabica has a zlib library that is a dynamic lib in /usr/ncsa/lib.
Binary generated would fail to run with a missig libz.so complain
if /usr/ncsa/lib is not in $LD_LIBRARY_PATH. This exposed the
problem that if the binary is linked with -L$mylibpath -lxyz
where libxyz is a dynamic type, the binary can't run if $mylibpath
is not in $LD_LIBRARY_PATH (or equivalent) or as part of the
system default library paths (e.g., /usr/lib, /usr/local/lib).
This problem also caused failures during configure (when trying
to see what format to print long long) and during H5detect.
The base cause is because libtool does not "transfer" the
knowledge of -L$mylibpath to the wrapper file its mode=link
generates.
Solution:
bin/ltmain.sh:
Changed it so that it transfers the libpaths from -Llibpaths
to the wrapper generated. I used the already defined variable
finalize_shlibpath. Not sure it is correct to use it this way.
Need to check on this.
configure.in:
Put in a patch to transfer information from LDFLAGS to LD_LIBRARY_PATH
right before the AC_TRY_RUN. The above fix for ltmain.sh does not
work here because libtool is generated later than this point.
There should be a cleaner way to do this.
Removed the hardcode of NCSA_LT_LINK_EXE because it is no longer
needed.
commence.in:
Removed the hardcode of NCSA_LT_LINK_EXE because it is no longer
needed.
Makefile.in:
Another patch of LDFLAGS to LD_LIBRARY_PATH because I could not
make it to generate H5detect in the wrapper form of libtool.
Need to make it to use the libtool correctly. Later.
Platform tested:
arabica (solaris 2.7)
baldric (solaris 2.6)
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Albert's
automated tests will work correctly on arabica.
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The changes seem harmless. So checking it in once for all.
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point
selections.
Also fixed bug which was not allowing the "start_point" parameter to
H5Sget_select_elem_pointlist to actually get used. It was always returning a
list of points selected which started with the beginning of the list of points.
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to be have_windows_h.
also included the windows.h
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internal list of
block to reduce amount of memory moving required. This corrects the
exponential increase in time to add blocks for larger numbers of blocks.
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H5private.h
which is also used by most Unix systems.
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Bug fix.
Description:
When only p0 will write for allsame metadata, other processes
returns with SUCCEED immediately. In some racing conditions, the
other processes may start reading the metadata before p0 has finished
writing them out. That results in errors. (I verified by putting
an intentional delay in the p0 code. Other processes then got read
errors always.)
Solution:
When only-p0-writes is the case, p0 will Bcast the result to other
processes. This provides both a synchoronization and more valid
logic since the other processes will return FAIL too IF p0 write
fails.
Also fixed a typo of the H5F_MPIO_DEBUG_KEY name.
Also removed the incorrect #define's of FALSE and TRUE.
They are already defined in H5private.h.
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form of H5_HAVE_PARALLEL and H5_HAVE_GASS.
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information.
It is for all those pre-release situations like alpha, beta, pre-n, ...
In normal releases, it should be an empty string.
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** src/H5FDpublic.h
Added a #define for H5_HAVE_VFL to make life easier for application
programmers.
** config/depend1
A minor tweak to the way GNU systems generate file dependencies for
the Makefiles.
** src/H5T.c
Fixed a bug with enumeration types not having the correct object
header pointer.
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references.
Data is ok in the file, just mixed up when trying to dereference the region.
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unnecessary truncation.
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Fixed a bug with enumeration types not having the correct object
header pointer.
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non-equal
VL types to compare as equal. Added some asserts to make certain nothing
slips through again. Also cleaned up a few warnings from the SGI compiler.
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** configure.in
** configure [REGENERATED]
** src/H5private.h
** src/H5public.h
** src/Makefile.in
Generates an H5pubconf.h file which is just like H5config.h except all
the preprocessor symbols have `H5_' prepended. This was done so that
the configuration results can be used in public header files without
polluting the namespace.
** src/H5.c
Added H5I_REFERENCE and H5I_VFL to the API tracing code so their names
are printed instead of just numbers.
** src/H5FDstdio.c
** tools/h5import.c
** tools/h5repart.c
** tools/pdb2hdf.c
Changed to use the `H5_' versions of configure results since these
files include only the public API.
** test/big.c
Removed a compiler warning.
** test/h5test.c
Removed unused code.
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** config/depend1.in
We don't regenerate the Dependencies files if we're compiling in the
source tree because `gcc -MM' doesn't output enough information to
make the result usable when compiling outside the source tree.
** src/H5config.h.in
Regenerated to include HAVE_LIBMPI and HAVE_LIBMPIO because of recent
changes to configure.in
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** bin/rpmsync
** config/depend1.in
Tweaks for versions of `make' that can't search directories.
** examples/Dependencies
** src/Dependencies
** test/Dependencies
** testpar/Dependencies
** tools/Dependencies
Regenerated all these with more complete path names.
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----------------------
./MANIFEST
./configure.in
./configure [REGENERATED]
Added more checking for `make' features.
./Makefile.in
./doc/Makefile.in
./doc/html/Makefile.in
./doc/html/Tutor/Makefile.in
./examples/Makefile.in
./pablo/Makefile.in
./src/Makefile.in
./test/Makefile.in
./testpar/Makefile.in
./tools/Makefile.in
./config/commence.in
./config/conclude.in
./config/depend.in [REMOVED]
./config/depend1.in [NEW]
./config/depend2.in [NEW]
./config/depend3.in [NEW]
./config/depend4.in [NEW]
./config/dependN.in [NEW]
The directory search stuff was moved into commence.in, thereby
shortening the Makefile.in prologues.
./doc/html/Dependencies [NEW]
./doc/html/Tutor/Dependencies [NEW]
./examples/Dependencies [NEW]
./src/Dependencies [NEW]
./test/Dependencies [NEW]
./testpar/Dependencies [NEW]
./tools/Dependencies [NEW]
The `.distdep' files were all renamed to `Dependencies' to make them
more obvious. They are required (but may be empty) in every directory
that has a Makefile.in that ends with @CONCLUDE@ (you'll get an
obvious error from make if you forgot to create one).
./bin/trace
./src/H5.c
Added H5E_major_t and H5E_minor_t although tracing only prints the
integer value.
./src/H5E.c
./src/H5Epublic.h
Added tracing information.
./src/H5FDcore.c
./src/H5FDfamily.c
./src/H5FDgass.c
./src/H5FDmpio.c
./src/H5FDsec2.c
./src/H5FDstdio.c
Fixed places where FUNC_LEAVE() evaluated it's argument more than
once.
Added tracing information.
Wrapped long lines.
./config/gnu-flags
Fixed a syntax error when we don't have a gnu compiler.
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got rid of the #error for WIN32
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changes.
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drivers back into
the "internal" HDF5 coding standard.
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