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* Fix CMake build of test needing compression libsAllen Byrne2019-09-031-1/+14
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* HDFFV-10677 and HDFFV-10661Binh-Minh Ribler2019-08-281-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: - Added functions to query chunk information: H5Dget_num_chunks(dset_id, fspace_id, *nchunks) Gets the number of written chunks that intersect with the given dataspace. However, in this version, the intersection is not yet completed. Thus, the number of all written chunks will be returned. H5Dget_chunk_info_by_coord(dset_id, *offset, *filter_mask, *addr, *size) Given a chunk's logical coordinates, returns the chunk's filter, address, and size. H5Dget_chunk_info(dset_id, fspace_id, index, *offset, *filter_mask, *addr, *size) Given a chunk's index, returns the chunk's logical coordinates, filter, address, and size. The chunk belongs to a set of chunks that have nonempty intersection with the specified dataspace. However, in this version, the intersection is not yet completed, and the index is of all the written chunks. These functions comply with VOL. - Fixed some oversights found in the library for the tests in chunk_info.c to work correctly. The returned value from a callback function was not checked in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate(). This oversight caused a callback function to continue iterating even though it's supposed to stop. Platforms tested: Linux/64 (jelly) Linux/64 (platypus) Darwin (osx1011test)
* Squashed commit of the following:Larry Knox2019-07-251-0/+3
| | | | | | | | | | | Merge changes from update_merged_S3_HDFS branch into develop. commit d5034315aea88629929ac0c9c59ebfafd5f21a31 Merge: 9c48823 d3fdcd8 Author: Larry Knox <lrknox@hdfgroup.org> Date: Thu Jul 25 08:24:53 2019 -0500 Merge branch 'develop' into update_merged_S3_HDFS
* HDFFV-8631 mingw is different platformAllen Byrne2019-07-171-2/+2
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* Add support for GCC9, update warnhist script, and clean up warnings.Quincey Koziol2019-07-031-0/+1
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* HDFFV-10805 Add option to only build shared targetsAllen Byrne2019-06-181-126/+103
| | | | | HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static HDFFV-10803 Update FindSZIP.cmake find module Remove unneeded modules and update java modules
* ESE-97 add vol_plugin test to CMake buildsAllen Byrne2019-04-251-2/+19
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* Fix CMake errorsAllen Byrne2019-04-181-1/+1
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* Forgot to add external_common.c and external_common.h.Songyu Lu2019-04-101-0/+2
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* Updated CMake for the splitting of external.c and vds.c.Songyu Lu2019-04-101-0/+2
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* CMake: fix pthread linking to only be privateJerome Soumagne2019-03-131-1/+6
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* Fix CMake H5_HAVE_THREADSAFE to set value in H5pubconf.hJerome Soumagne2019-02-211-1/+1
| | | | | | Add REQUIRED to find_package(Threads) Link against thread library if static and not WIN32 platform
* HDFFV-10703 Update CMake commands to latest standardAllen Byrne2019-02-151-10/+10
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Vailin Choi2019-01-021-1/+1
|\ | | | | | | | | | | | | | | develop Resolve conflicts: Conflicts: test/Makefile.am
| * Fixed a CMake build issue (CMake still doesn't run the VOL pluginDana Robinson2018-12-281-1/+1
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* | Fix for HDFFV-10659: The library abort with "infinite loop closing library"Vailin Choi2018-12-281-0/+1
|/ | | | | | | | after deleting attributes in densed storage. The fix: When deleting attribute nodes from the name index v2 B-tree, if an attribute is found in the intermediate B-tree nodes, which may be merged/redistributed in the process, we need to free the dynamically allocated spaces for the intermediate decoded attribute.
* HDFFV-10605 Only test plugins if SHARED enabledAllen Byrne2018-11-061-0/+2
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* VOL FEATUREDana Robinson2018-10-101-0/+33
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* CMake changes for SKIPPED and flush testsAllen Byrne2018-09-241-1/+1
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* Fix usage of compression lib in shared testsAllen Byrne2018-06-011-1/+18
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* Merge pull request #1043 in HDFFV/hdf5 from ↵Dana Robinson2018-05-311-0/+1
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop * commit '1da9c5545c013ebc540ba3044810889d4acfa5be': Restored some unused #defines to the deprecated section of H5Dpublic.h. Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers. Updated commenting in the H5DO compat test. Stripped out most of the duplicated functionality in the H5DO compat test. * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines. * Fixed the error tests * Moved common functionality into helper functions Normalize with trunk prior to update merge Fixed a warning. Finished move of H5DOread/write_chunk calls to H5D. First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
| * Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-05-151-96/+77
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| * \ Merge branch 'develop' into h5do_direct_chunk_hl_to_srcDana Robinson2018-04-301-7/+23
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| * | | First stage of moving H5DOread/write_chunk() to src/ and makingDana Robinson2018-04-301-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform and renamed to direct_write_perf. * Updated autotools and CMake files.
* | | | Fix MPI on Windows by adding MPI include folderAllen Byrne2018-05-091-21/+21
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* | | Correct COMPILE defs usageAllen Byrne2018-05-091-1/+1
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* | | TRILABS-19 remove add_defintions and use generator expressionsAllen Byrne2018-04-261-96/+77
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* | TRILABS-20 set a compiler name on all project commandsAllen Byrne2018-04-201-1/+1
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* | TRILABS-19 Initial conversion of include_directories to targetsAllen Byrne2018-04-171-6/+22
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* HDFFV-10444 fix soversion numbers for librariesAllen Byrne2018-04-101-4/+4
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* Change CMake min to 3.10Allen Byrne2018-03-091-1/+1
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* Fix list varAllen Byrne2018-02-271-1/+1
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* Fix IN_LIST usageAllen Byrne2018-02-271-1/+1
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* Inc CMake min, Add new tests, rework test CMake filesAllen Byrne2018-02-271-113/+112
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* HDFFV-10385 rework java namesAllen Byrne2018-01-171-19/+0
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* HDFFV-9724 Corrected files and verified testsAllen Byrne2017-12-281-6/+6
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* Add library INTERFACE and MPI to toolsAllen Byrne2017-12-281-8/+10
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* Correct linkage of filters and other libsAllen Byrne2017-11-161-2/+2
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* Plugin test reworkDana Robinson2017-11-091-46/+46
| | | | Cleanup of plugin test code. Renames many files. Prep for VOL branch merge.
* Fix for HDFFV-10160Vailin Choi2017-06-291-0/+1
| | | | Modifications to fix the assertion/abort failure when the application does not close the file.
* Final merge of page buffering branch to developQuincey Koziol2017-03-141-0/+1
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* Update CMake files and formattingAllen Byrne2017-03-011-1/+1
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* cmake non-code typoAllen Byrne2017-03-011-1/+1
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* HDFFV-10125 cache_common file already in test libAllen Byrne2017-02-021-2/+0
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* Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into ↵Quincey Koziol2017-01-291-0/+69
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| * Moved remaining SWMR-related test files to develop.Dana Robinson2017-01-261-0/+69
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* | Cache image feature and testingQuincey Koziol2017-01-291-0/+22
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* Update cmake min version and cmake command conventionAllen Byrne2017-01-101-24/+24
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* Added a missing test file needed for the flushrefresh script.Dana Robinson2016-12-301-0/+8
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* Bring new/updated tests from revise+chunks branch: flush1/flush2 update andQuincey Koziol2016-12-201-0/+1
| | | | flushrefresh test. (Also refactor of message send / wait code)