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* HDFFV-10903 merge S3 from devAllen Byrne2019-09-231-3/+3
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* Adding tests for version boundsBinh-Minh Ribler2017-12-101-1/+1
| | | | | | | | | | | | | | | | Description: - Added test program, tverbounds18.c, that reads various files of different layout versions - Added the data files: bounds_earliest_latest.h5 bounds_earliest_v18.h5 bounds_latest_latest.h5 bounds_v18_latest.h5 bounds_v18_v18.h5 Platforms tested: Linux/32 2.6 (jam) Linux/64 (platypus) Darwin (osx1010test)
* Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 fileVailin Choi2017-09-061-1/+1
| | | | | Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
* Put back link targets for dynamically loaded libraries in Makefile.amslrknox2017-06-151-0/+12
| | | | | | that avoid linking with libhdf5 dependencies. Some configurations failed unnecessarily to find and link with lz and lsz when these targets were removed.
* Disable building of libdynlib* dynamically loaded plugin test librarieslrknox2017-06-141-12/+2
| | | | | | | on CYGWIN. Added known problem entry to RELEASE.txt. Set version for 1.8.19 release. Barbara updated contents of README.txt file.
* Moved libdynlib* plugin test libraries to noist_LT_LIBRARIES with addedlrknox2017-06-121-11/+8
| | | | | | | flag '-rpath /nowhere' to stop them being installed while keeping them from linking with libhdf5, etc. Incremented version to 1.8.19-pre1 and ran bin/release to create tar and zip files for testing.
* Change copyright headers to replace url referring to file to belrknox2017-05-161-6/+4
| | | | removed and replace it with new url for COPYING file.
* Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-101-3/+15
| | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* HDFFV-10170 undo patch and fix dyn lib buildAllen Byrne2017-04-181-7/+10
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* HDFFV-10173 fix cygwin noinst libsAllen Byrne2017-04-171-4/+1
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* [svn-r30180] reconfigure after fixing errorsAllen Byrne2016-07-121-1/+1
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* [svn-r30171] HDFFV-9939: convert cmake copy commands to reduce issue with ↵Allen Byrne2016-07-121-1/+2
| | | | | | | too long command lines on some platforms. Also, refactor hl/tools/gif3h5 cmake files. JAVA-1920: add plugin test with plugin that depends on hdf5
* [svn-r29703] Updated test/Makefile.am to clean up file added in HDFFV-8740 fix.Dana Robinson2016-04-151-1/+1
| | | | Tested on: jam
* [svn-r25033] Purpose:Dana Robinson2014-04-121-1/+1
| | | | | | | | | | | | | | | | | | Merged r24993 from the trunk. Adds core VFD write tracking functionality. When enabled, the core VFD will track dirty regions of the file and only write out the changed regions. The new H5Pget/set_core_write_tracking() API call controls this feature. A new "core_paged" VFD target was added to the check-vfd target in test/Makefile.am that runs all tests with the new write tracking functionality. Tested on: 32-bit LE linux (jam) 64-bit LE linux (koala) 64-bit BE linux (ostrich) Each platform was tested with HDF5_DRIVER set to "core" and "core_paged". Jam was also tested with the standard sec2 driver.
* [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunkAllen Byrne2014-04-071-1/+1
| | | | Tested: h5committest
* [svn-r24393] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-1/+1
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autotools
* [svn-r23702] Issue 8380 - H5Zunregister caused seg fault. This is a porting ↵Raymond Lu2013-05-141-2/+2
| | | | | | | | | of code from the trunk. It fixes the problem by first iterating through all opened datasets and groups to see if any of them uses the filter. If it finds one, the function fails with a message. Then the function flushes all opened files. Tested with h5committest.
* [svn-r23521] I merged the changes for testing groups with filter into this ↵Raymond Lu2013-04-021-2/+3
| | | | | | branch. Tested on jam and koala.
* [svn-r23512] Replace install-data-local with install-exec-hook in ↵Larry Knox2013-04-011-1/+1
| | | | | | | | test/Makefile.am. Change fixes order of chmod and rm for *dynlib* with parallel make. Tested in trunk.
* [svn-r23510] I merged the changes for DESY project from the trunk (r23496) ↵Raymond Lu2013-04-011-9/+30
| | | | | | into this 1.8 DESY branch. Tested with h5committest (duck failed with CMake because I don't know how to change test/CMakeLists.txt. I'll wait for Allen to do it).
* [svn-r22485] Description:Quincey Koziol2012-06-231-3/+5
| | | | | | | | | | | | | | Merge r22484 from trunk to 1.8 branch: Copy the file image test file from the source directory to the build directory, instead of trying to open the [in-memory] file R/W. Also, clean up a few other test files that were left lying around from other tests. Tested on: MacOSX/64 10.7.4 (amazon) w/debug Too minor to require h5committest
* [svn-r22228] Description:Quincey Koziol2012-04-011-2/+3
| | | | | | | | | Bring r22219 from trunk to 1.8 branch: (with release manager's blessing) Merge "file image" changes from feature branch back to trunk. Tested on: h5committested
* [svn-r21122] Description:Quincey Koziol2011-07-181-1/+1
| | | | | | | | | | | | | Bring r21120 from trunk to 1.8 branch: Check in ugly version of fix for Jira #7638. I'm going to leave the issue open in Jira and when the library has been refactored to use shared file pointers (instead of top file pointers) for file operations, I'll uncomment the check in src/H5Oshared.c Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too small for h5committest)
* [svn-r21024] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the ↵Raymond Lu2011-06-231-1/+2
| | | | | | | | | | | | | whole MULTI file saved in the super block. We took it out in v1.8 library because it's meaningless for the MULTI file. v1.8 library saves the EOA for the metadata file, instead. But this caused some backward compatibility problem. v1.8 library couldn't open the file created with v1.6 library. I fixed the problem by checking the EOA value to detect the file created with v1.6 library. Tested on jam, koala, and linew.
* [svn-r20489] Bug 1386 - allow dimension size to be zero even though it isn't ↵Raymond Lu2011-04-131-1/+1
| | | | | | | | | | | | | | | | unlimited. I brought the changes from the trunk as below: 1. I added test cases for contiguous, compact, and chunked, and external storage datasets, and also attribute. The test includes dataspace selections. 2. I added a test case of extending dataset of zero dimension size and shrinking back to zero dimension size. 3. I updated the Makefile to include the new data file to be cleaned up. 4. The dataspace code has another bug - when the maximal dimension isn't passed in for H5Sset_extent_simple, it is supposed to be same as the dimension. The current library sets NULL to it. I corrected it and added a test case to it. 5. I corrected the tests of Fortran and C++ for the problem in point 3. Tested on jam, heiwa, and amani.
* [svn-r20470] Merged 20459 and 20462 (new and updated VFD tests) from trunk.Dana Robinson2011-04-111-1/+1
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* [svn-r20114] Merge r20112 (open_file_pool) into 1_8 branch.Neil Fortner2011-02-171-2/+2
| | | | Tested: jam (open_file_pool branch tested with h5committest)
* [svn-r19824] 1. Made fixes as in rev #19813 in trunk:Vailin Choi2010-11-181-4/+4
| | | | | | | a) Add comments to test_4() in test/external.c about the name "/ link". b) Fix one memory leak in src/H5Lexternal.c: free memory pointed to by tmp_env_prefix for HDF5_EXT_PREFIX case. 3. Made changes for bug #1930 as in rev #19783, #19781 in trunk. 4. Made corresponding CMake changes as in rev #19782 in trunk.
* [svn-r19618] Purpose:Mike McGreevy2010-10-151-2/+2
| | | | | | | | | | Bring metadata accumulator fixes and tests into 1.8 Description: Changes consist of addition of tests for H5Faccum.c source code, as well as some fixes that address some discovered bugs in the metadata accumulator on several corner cases. Tested: h5committested
* [svn-r19405] Description:Quincey Koziol2010-09-161-1/+1
| | | | | | | | | | | | | | | | | | | | | | Bring r19402 from trunk to 1.8 branch: Correct Bz#1968 (Problem when opening new format file with H5F_LIBVER_EARLIEST) by initializing symbol table leaf information in a more universal way. Also cleaned up other superblock initialization a little bit while I'm here. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.4 (amazon) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r19359] When mandatory filter failed to write data chunks, the datasetRaymond Lu2010-09-081-2/+2
| | | | | | | couldn't close (bug 1260). The fix releases all resources and closes the dataset but returns a failure. Tested with h5committest - jam, heiwa, amani.
* [svn-r19077] Purpose: Fix bug 1951Neil Fortner2010-07-161-1/+1
| | | | | | | | | | | | Description: A bug introduced in 1.8.5 causes local heap data blocks to be mis-aligned when sizeof_offsets + 2*sizeof_lengths is not a multiple of 8. In this case, the address of the data block as stored in the heap prefix is aligned but the actual data block is not. This causes files created with these sizes to be corrupted, and prevents uncorrupted files with these sizes to be unreadable. Modified local heap code to account for alignment. Tested: jam, amani, linew (h5committest)
* [svn-r18189] I added a test for copying an existing DCPL and using the copy ↵Raymond Lu2010-01-291-1/+1
| | | | | | | | | | to create a new dataset. There's a bug report (#1608) saying h5repack failed to do that sometimes. But I couldn't reproduce it. So I added this test and closed the report. The test is in the function test_copy_dcpl in dsets.c. Tested on jam, amani, and linew.
* [svn-r18106] bug 1673:Albert Cheng2010-01-121-1/+1
| | | | | | | | | | | | | | The mixed use of RUNTEST (original) and RUNTESTS (new) caused confusion. E.g., the timings in test/ was still using the old $RUNTEST. It made more sense to use $RUNTEST which is used by the dejagnu feature of automake. So, I changed all $RUNTEST or $RUNTESTS to $RUNEXEC. config/commence.am & config/conclude.am are the two files that got changes. Also fixed an error in test/Makefile.am. The rest are changed by bin/reconfigure. Tested: h5committested.
* [svn-r17579] added testlibinfo.sh testcheck_version.sh to be distcleaned.Albert Cheng2009-10-011-1/+1
| | | | Test: Jam.
* [svn-r17548] ↵Albert Cheng2009-09-291-22/+24
| | | | | | | | | | | | | | | | ------------------------------------------------------------------------ r17543 | acheng | 2009-09-28 23:43:22 -0500 (Mon, 28 Sep 2009) | 8 lines New test: (Bug ID 1656): Add new tests (tcheck_version, testcheck_version.sh) to verify H5check_version() does issue warnings and abort accordingly. Changed H5check_version() to suppress the warning message totally if $HDF5_DISABLE_VERSION_CHECK is 2 or higher. (Old behavior treated 3 or higher the same as 1, that is to print a warning and allows the program to continue. Tests: H5committed tested plus jam serial tested.
* [svn-r17526] Description:Quincey Koziol2009-09-241-3/+3
| | | | | | | | | Add backward compatibility test to make certain that the 1.8 library handles encountering a file with a fixed array chunk index gracefully. Tested on: FreeBSD/32 6.3 (duty) w/production (too minor to require h5committest)
* [svn-r17517] In the function test_rw_noupdate, I added a test with the ↵Raymond Lu2009-09-241-4/+4
| | | | | | | | | | | system functions to make sure the stat function behaves as we expected. This test is skipped on some system because the modification time from stat is the same as the last access time (We know OpenVMS behaves in this way). Tested on jam. I've tested the same change for the trunk on jam, smirom, and linew. My account for OpenVMS expired. I'll test it once I have it back.
* [svn-r17499] Purpose:Albert Cheng2009-09-181-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Stage 2 implementation of embedded library information feature. H5.c: added code to print the embedded library information when there is a library versions mis-match occurs. This ensures the library information string is included in the executable. Also modifies the code so that the Library mismatch warning string is included only once in the executable. H5private.h: Added a global reference to the libinfo string variable to prepare for possible stage 3 implementation of a public API. test/testlibinfo.sh.in: A new test added to verify the library information is indeed included in the executables. configure.in: configure: Added entry to auto-generate test/testlibinfo.sh. H5detect.c: Modified the libhdf5settings generating code to allow it to insert the strings to a file other than stdout. This maybe needed in stage 3 implementation. MANIFEST: updated with the newly added file of testlibinfo.sh.in. Tested: h5committest passed. Also passed jam in serial mode.
* [svn-r16920] Description:Quincey Koziol2009-05-051-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | Merge these trunk revisions which occurred during the 1.8.3 release code freeze back to the 1.8 branch: From Quincey: 16845 16847 16849 16851 16858 16869 16897 From Ray: 16859 16880 From Allen: 16863 Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.5.6 (amazon) in debug mode Mac OS X/32 10.5.6 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r16758] The test of family file compatibility with v1.6 used the ↵Raymond Lu2009-04-151-1/+2
| | | | | | | | | | original family files under the library source directory. Since the test opens the files with write mode, it's safer to make copies of the original files. I added the copying step in test_family_compat in vfd.c. I changed the Makefile.am to clean up the copied files. I created a new family_v16_00000.h5 with v1.6 library. Tested on jam - supposed to be simple change.
* [svn-r16495] Description:Quincey Koziol2009-02-191-1/+2
| | | | | | | | | | | Bring r16488 back from trunk: Clean up code and eliminate resource leaks. Also avoid "null" I/O when chunk doesn't exist and we can skip it. Tested on: Mac OS X/32 10.5.6 (amazon) (too minor to require h5committest)
* [svn-r16374] Description:Quincey Koziol2009-01-291-1/+1
| | | | | | | | | | Bring r16372 back from trunk: Clean up files produced from set_extent testing. Tested on: FreeBSD/32 6.3 (duty) (too minor to require h5committest)
* [svn-r15811] Some test produced files were not cleaned by "make clean".Albert Cheng2008-10-081-1/+1
| | | | | | Added them to the clean list. Tested: kagiso.
* [svn-r15801] Description:Quincey Koziol2008-10-071-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Bring r15800 back from trunk: - File free space branch changes through r15794 Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r15486] Purpose: Allow library to shut down properly when objects have ↵Neil Fortner2008-08-191-3/+3
| | | | | | | | | | | | | | | | reference count > 1. Description: Added a new field 'app_count' to H5I_id_info_t struct, to track the reference count on an id due to the application. the old 'count' field tracks the total. Generally any id visible to the application gets placed in app_count. Added app_ref boolean parameter to H5I_inc_ref, H5I_dec_ref, H5I_register, H5I_clear_type, and a few other functions, to specify whether the operation(s) being performed on the id(s) are due to the application (TRUE) or not (FALSE). Test added for this case. Tested: kagiso, smirom, linew (h5committest)
* [svn-r15016] Description:Quincey Koziol2008-05-161-1/+1
| | | | | | | | | | | | | | | | | | | Port revision 15015 back to 1.8 branch: > Detect chunks that are >4GB before dataset gets created and return error > to application. > > Tweak lots of internal variables that hold the chunk size/dimensions to > use an 'uint32_t', instead of a 'size_t', so that the integer size is constant. > > Correct a number of our tests which were creating datasets with chunks > that were >4GB and add some specific tests for >4GB chunk size detection. > > Minor whitespace & other code cleanups. Tested on: Mac OS X/32 10.5.2 (amazon) Forthcoming testing on other platforms...
* [svn-r14917] Description:Quincey Koziol2008-05-011-2/+4
| | | | | | | | Clean up files created & cleaned up for dataset tests. Tested on: Mac OS X/32 10.5.2 (amazon) Too minor to require h5committest
* [svn-r14791] Add handling for external link:Vailin Choi2008-04-021-1/+2
| | | | | | | 1. src/H5F.c, src/H5system.c: formulate path for mainfile 2. src/H5Lexternal.c: add search for target file 3. configure.in: add H5_HAVE_WINDOW_PATH 4. test/links.c: add tests for external link
* [svn-r14402] Description:Quincey Koziol2008-01-131-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Add work-around to allow reading files that were produced with a buggy earlier version of the library, which could create objects with the wrong object header message count. There is now a configure flag "--enable-strict-format-checks" which triggers a failure on reading a file with this sort of corruption (when enabled) and allows the object to be read (when disabled). The default value for the "strict-format-checks" flag is yes when the "debug" flag is enabled and no when the "debug" flag is disabled. Note that if strict format checks are disabled (allowing objects with this particular kind of corruption to be read) and the file is opened with write access, the library will re-write the object header for the corrupt object with the correct # of object header messages. This closes bugzilla bug #1010. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
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