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* [svn-r30240] JAVA-1920: Create a filter plugin test that has a filter which ↵Allen Byrne2016-08-011-2/+3
| | | | calls a HDF5 function.
* [svn-r30068] Description:Quincey Koziol2016-06-131-1/+1
| | | | | | | | Bring metadata cache corking to trunk. Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29844] Description:Quincey Koziol2016-05-011-7/+13
| | | | | | | | Minor rearrangements, to align with revise_chunks branch Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29738] Description:Quincey Koziol2016-04-191-1/+1
| | | | | | | | Bring "single" chunk index from revise_chunks branch to trunk. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd) (h5committest forthcoming)
* [svn-r29722] Description:Quincey Koziol2016-04-171-1/+1
| | | | | | | | Bring over more dataset tests from the revise_chunks branch. Tested on: MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r29716] Description:Quincey Koziol2016-04-161-2/+4
| | | | | | | | Add missing testfiles from dsets.c to the 'clean' target. Tested on: MacOSX/64 10.11.4 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r29421] Fix for HDFFV-9516.Dana Robinson2016-03-151-2/+2
| | | | | | | | Corrects a problem where H5Dget_access_plist() returns a dapl that does not contain all dapl fields. Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1 autotools serial
* [svn-r29182] Re-commit of HDFFV-8740 fix, which adds the ability to configureDana Robinson2016-02-221-1/+1
| | | | | | | | | | | | external dataset storage path behavior. This check-in fixes a bug in the original check-in where the external path stored in the file struct was not copied on reopen causing subsequent dataset operations to fail. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial w/ fortran and C++ autotools parallel (MPICH 3.1.4) w/ fortran
* [svn-r29084] Revert of:Dana Robinson2016-02-111-1/+1
| | | | | | | | | | | | | | | r29069 and 72 (gheap cleanup) r29041 and 43 (HDFFV-8740 external storage) These cause problems in the daily tests. They will be re-introduced when their respective problems have been addressed. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial (check-vfd) w/ Fortran and C++ autotools parallel w/ Fortran CMake serial
* [svn-r29072] test/gheap stack size cleanup.Dana Robinson2016-02-091-1/+1
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial autotools (also w/ Valgrind)
* [svn-r29041] Patch from Steffen Kiess that allows a relative path to be ↵Dana Robinson2016-02-041-1/+1
| | | | | | | | | | | specified for external dataset files set via H5Pset_external(). Resolves HDFFV-8740 Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial
* [svn-r28710] Description:Quincey Koziol2015-12-191-8/+6
| | | | | | | | | | | | Bring r28708 from revise_chunks branch: Fix earray, farray and btree2 use of incorrect file pointer when two files are opened and used to access the data structure. Misc. minor code cleanups as well. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel h5committest forthcoming
* [svn-r27835] Description:Quincey Koziol2015-09-211-1/+1
|\ | | | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27806] Fix property list serialization for values encoded by ↵Neil Fortner2015-09-161-1/+1
| | | | | | | | | | | | | | | | | | | | H5Pset_chunk_cache to be compatible between 32 and 64 bit systems. Expand cross platform property list encode/decode testing. Fix warning in H5P__fill_value_enc. Tested: jam, koala, ostrich (h5committest), ummon
* | [svn-r27145] Add some testing for printf-style source dataset name resolution.Neil Fortner2015-06-031-1/+1
| | | | | | | | | | | | | | Various bug fixes, including a temporary fix for printf with FIRST_MISSING view. Other cleanup. Tested: ummon
* | [svn-r26411] Add support for I/O in very simple cases (virtual mapping and ↵Neil Fortner2015-03-091-1/+1
| | | | | | | | | | | | | | | | | | file space are both H5S_ALL). Note make check fails in h5dump test (unrelated to this checkin). Tested: ummon
* | [svn-r26261] Commit working but incomplete prototype. Does not perform I/O.Neil Fortner2015-02-201-1/+1
| | | | | | | | Tested: ummon
* | [svn-r26198] INCOMPLETE, UNWORKING CODENeil Fortner2015-02-171-2/+3
|/ | | | Commit progress through 1610 CST 2/17/15
* [svn-r24993] Purpose:Dana Robinson2014-04-091-1/+1
| | | | | | | | | | | | | | | Adds write tracking to the core VFD, which can be configured via the H5Pset/get_core_write_tracking() API call. When enabled and writing to the backing store is enabled, this feature will track writes and only write out the changed bytes on flush/close. Tested on: 32-bit LE linux (jam) w/ Fortran and C++ 64-bit BE linux (ostrich) 64-bit Darwin 12.5.0 (kite) All were tested using the core VFD w/ paging on (core_paged in the VFD list). Make check-vfd was also tested on jam.
* [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS ↵Allen Byrne2014-03-311-1/+1
| | | | | | instead of INCLUDES. Update automake to 1.14.1 h5committest
* [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-1/+1
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autools, and h5committest
* [svn-r23656] Issue 8380 H5Zunregister caused seg fault: I added some ↵Raymond Lu2013-04-291-2/+2
| | | | | | | | | protection measures: 1. If any opened object uses the filter, let it fail. 2. Flush all opened files to push any cached data to files. Tested with h5committest.
* [svn-r23513] I added a test case in plugin.c for testing using filter for ↵Raymond Lu2013-04-011-1/+2
| | | | | | groups and created a dummy filter library for this test case. Tested on jam and koala.
* [svn-r23511] Replaced install-data-local with install-exec-hook in ↵Larry Knox2013-04-011-1/+1
| | | | | | test/Makefile.am. tested with h5committest
* [svn-r23494] I added another filter library dynlib2.c for plugin.c test. ↵Raymond Lu2013-03-291-3/+4
| | | | | | | | The test script moves the libdynlib2.so to /tmp then runs plugin.c. Tested on jam and koala.
* [svn-r23493] Correct improper additionAllen Byrne2013-03-291-3/+0
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* [svn-r23491] Add test_plugin.sh to list of cleanup filesAllen Byrne2013-03-291-1/+3
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* [svn-r23482] I changed the plugin library to be built as shared library only ↵Raymond Lu2013-03-281-2/+6
| | | | | | when configure enables shared. libtool will install the shared plugin library. I put a remove command in test/Makefile.am to delete the unnecessary plugin library. Tested on jam, koala, and emu.
* [svn-r23480] Reposition conditional and libtool commands.Allen Byrne2013-03-281-10/+8
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* [svn-r23465] I moved dynlib1.c to test/ directory and revised the ↵Raymond Lu2013-03-271-9/+28
| | | | | | | | Makefile.am in test/. I added the condition to skip plugin.c test when the library is built for static. Tested on jam, koala, and emu.
* [svn-r23346] First commit for DESY project. It has the basic functionality ↵Raymond Lu2013-03-131-5/+5
| | | | | | of loading dynamically filter libraries and a simple test for it. Tested on koala.
* [svn-r22807] Description:Quincey Koziol2012-09-251-2/+2
| | | | | | | | | | | | | | | | | | | | | Add encode/decode API routines for property lists: H5Pencode/H5Pdecode. Tested on: FreeBSD/32 8.2 (loyalty) w/gcc4.6, w/C++ & FORTRAN, in debug mode FreeBSD/64 8.2 (freedom) w/gcc4.6, w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (koala) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (ostrich) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (ember) w/Intel compilers, w/parallel, C++ & FORTRAN, in production mode Mac OS X/32 10.7.3 (amazon) in debug mode Mac OS X/32 10.7.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.7.3 (amazon) w/parallel, in debug mode
* [svn-r22486] Description:Quincey Koziol2012-06-231-3/+4
| | | | Fix typo with last change and reformat a little bit
* [svn-r22484] Description:Quincey Koziol2012-06-231-3/+4
| | | | | | | | | | | | Copy the file image test file from the source directory to the build directory, instead of trying to open the [in-memory] file R/W. Also, clean up a few other test files that were left lying around from other tests. Tested on: MacOSX/64 10.7.4 (amazon) w/debug Too minor to require h5committest
* [svn-r22219] Description:Quincey Koziol2012-03-311-2/+2
| | | | | | | | Merge "file image" changes from feature branch back to trunk. Tested on: Mac OSX/64 10.7.3 (amazon) w/debug (h5committest upcoming)
* [svn-r21120] Description:Quincey Koziol2011-07-181-1/+1
| | | | | | | | | | | Check in ugly version of fix for Jira #7638. I'm going to leave the issue open in Jira and when the library has been refactored to use shared file pointers (instead of top file pointers) for file operations, I'll uncomment the check in src/H5Oshared.c Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too small for h5committest)
* [svn-r21017] This is a follow-up checkin for r21015 (bug fix for Issue ↵Raymond Lu2011-06-221-1/+2
| | | | | | | | 2598). I added two minor changes: 1. put the output file for vfd.c test in the list for cleanup in Makefile.am; 2. put the data file in the list in CMakeLists.txt. Tested on jam - simple change.
* [svn-r20469] Bug 1386 - allow dimension size to be zero even though it isn't ↵Raymond Lu2011-04-111-1/+1
| | | | | | | | | unlimited. This is a follow-up checkin for r20440: 1. I added a test case of extending dataset of zero dimension size and shrinking back to zero dimension size. 2. I updated the Makefile to include the new data file to be cleaned up. Tested on jam - relatively simple.
* [svn-r20459] Purpose:Dana Robinson2011-04-081-1/+1
| | | | | | | | | | | | | | | Progress on bug 2138 (bugzilla) / HDFFV-4298 (JIRA) Description: - Added basic VFD tests (i.e. cloned the SEC2 test) for the Windows, STDIO and log VFDs. - Added H5Pget_driver() sanity check to all VFD's tests. - Added log output file to list of files to clean up in Makefile.am. Tested on: - h5committest script platforms (jam, amani, heiwa) - Windows 7 (32- and 64-bit)
* [svn-r20064] Purpose: Implement external file cacheNeil Fortner2011-02-081-2/+2
| | | | | | | | | Description: Implements a cache of files opened through external links. Adds the public functions H5Pset_elink_file_cache_size(), H5Pget_elink_file_cache_size(), and H5Frelease_file_cache(). Tested: jam, amani, heiwa (h5committest), fedora 64.
* [svn-r19813] 1. Correct mistake for previous checkin rev #19781:Vailin Choi2010-11-171-1/+1
| | | | | | | file name listed for DISTCLEANFILES should be testlinks_env.sh 2. Add comments to test_4() in test/external.c about the link name "/ link". 3. Fix memory leak as reported by valgrind in src/H5Lexternal.c: free memory pointed to by tmp_env_prefix for HDF5_EXT_PREFIX case.
* [svn-r19781] Fix for bug #1930:Vailin Choi2010-11-151-4/+4
| | | | | | 1) Move the test for H5D_EXT_PREFIX in links.c to a separate file: links_env.c 2) links_env.c will be used by testlinks_env.sh to test for the environmental variable H5D_EXT_PREFIX in searching for the external linked file.
* [svn-r19617] Purpose:Mike McGreevy2010-10-151-3/+3
| | | | | | | | | | Merge accum_tests branch back to the trunk. Description: Changes consist of addition of tests for H5Faccum.c source code, as well as some fixes that address some discovered bugs in the metadata accumulator on several corner cases. Tested: h5committested
* [svn-r19402] Description:Quincey Koziol2010-09-161-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | Correct Bz#1968 (Problem when opening new format file with H5F_LIBVER_EARLIEST) by initializing symbol table leaf information in a more universal way. Also cleaned up other superblock initialization a little bit while I'm here. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.4 (amazon) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r19363] When mandatory filter failed to write data chunks, the datasetRaymond Lu2010-09-091-2/+2
| | | | | | | couldn't close (bug 1260). The fix releases all resources and closes the dataset but returns a failure. Tested with h5committest - jam, heiwa, amani.
* [svn-r19076] Purpose: Fix bug 1951Neil Fortner2010-07-161-1/+2
| | | | | | | | | | | | Description: A bug introduced in 1.8.5 causes local heap data blocks to be mis-aligned when sizeof_offsets + 2*sizeof_lengths is not a multiple of 8. In this case, the address of the data block as stored in the heap prefix is aligned but the actual data block is not. This causes files created with these sizes to be corrupted, and prevents uncorrupted files with these sizes to be unreadable. Modified local heap code to account for alignment. Tested: jam, amani, linew (h5committest)
* [svn-r19005] Purpose:Mike McGreevy2010-06-151-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Commit metadata tagging framework. Description: This check-in contains a new framework whose goal is to apply a tag value to each new entry in the metadata cache as it is created. This tag value is such that it relates each piece of metadata to the HDF5 object that it belongs to (dataset, group, et cetera). This changeset includes the framework that applies the tags as well as a suite of tests to verify correct tag application, though does not yet make use of the tag values to flush/evict individual objects. Please refer to the "flush/evict individual objects" RFC for further discussion of these changes. Tested: jam, amani, linew (h5committest) liberty, abe, blue print
* [svn-r18193] I added a test for copying an existing DCPL and using the copy ↵Raymond Lu2010-01-291-1/+1
| | | | | | | | | to create a new dataset. There's a bug report (#1608) saying h5repack failed to do that sometimes. But I couldn't reproduce it. So I added this test and closed the report. The test is in the function test_copy_dcpl in dsets.c. Tested on jam. But I tested the same change in 1.8 on jam, amani, and linew.
* [svn-r18107] bug 1673:Albert Cheng2010-01-121-1/+1
| | | | | | | | | | | | | | The mixed use of RUNTEST (original) and RUNTESTS (new) caused confusion. E.g., the timings in test/ was still using the old $RUNTEST. It made more sense to use $RUNTEST which is used by the dejagnu feature of automake. So, I changed all $RUNTEST or $RUNTESTS to $RUNEXEC. config/commence.am & config/conclude.am are the two files that got changes. Also fixed an error in test/Makefile.am. The rest are changed by bin/reconfigure. Tested: h5committested.
* [svn-r17624] Description:Quincey Koziol2009-10-091-1/+1
| | | | | | | | | | | | | | | | | | | | | | | Don't allow reads to change or add to the metadata accumulator, since they might be speculative and could bring raw data into the metadata accumulator. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.1 (amazon) in debug mode Mac OS X/32 10.6.1 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
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