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* Reconfigured autoconf filesdpopat2019-07-191-0/+2
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* Fixed comments and updated Makefile.inBinh-Minh Ribler2017-12-111-2/+3
| | | | | Platforms tested: Linux/32 2.6 (jam)
* Add assignment to get value from environment variable realtimeOutput.lrknox2017-12-041-22/+56
| | | | Propagate changes to Makefile.ins with bin/reconfigure.
* reconfigure needed after commit of test/Makefile.am on 8/22/2017.lrknox2017-09-191-21/+31
| | | | | Snap version in configure file was incorrect due to merges. reconfigure changed comments in H5LTparse.c and .h.
* Merge branch '1.8/master' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 ↵lrknox2017-08-251-123/+85
|\ | | | | | | into hdf5_1_8
| * Put back link targets for dynamically loaded libraries in Makefile.amslrknox2017-06-151-8/+32
| | | | | | | | | | | | that avoid linking with libhdf5 dependencies. Some configurations failed unnecessarily to find and link with lz and lsz when these targets were removed.
| * Disable building of libdynlib* dynamically loaded plugin test librarieslrknox2017-06-141-43/+32
| | | | | | | | | | | | | | on CYGWIN. Added known problem entry to RELEASE.txt. Set version for 1.8.19 release. Barbara updated contents of README.txt file.
| * Moved libdynlib* plugin test libraries to noist_LT_LIBRARIES with addedlrknox2017-06-121-105/+54
| | | | | | | | | | | | | | flag '-rpath /nowhere' to stop them being installed while keeping them from linking with libhdf5, etc. Incremented version to 1.8.19-pre1 and ran bin/release to create tar and zip files for testing.
* | generated reconfigure files for configure changesM. Scot Breitenfeld2017-08-041-0/+1
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* Change copyright headers to replace url referring to file to belrknox2017-05-161-6/+4
| | | | removed and replace it with new url for COPYING file.
* Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIESlrknox2017-05-101-47/+60
| | | | | | and other changes to Makefiles and config/conclude.am to eliminate link errors with new libdynlib*_la_LDFLAGS which were added to stop libdynlib* files linking to external libraries.
* HDFFV-10170 fix reconfigureAllen Byrne2017-04-181-65/+123
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* HDFFV-10173 fix cygwin noinst libsAllen Byrne2017-04-171-101/+54
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* Update shared object file numbers according to changes in v1.8.18 release.lrknox2016-11-011-14/+26
| | | | | Update autotools and libtool versions. Run bin/reconfigure.
* [svn-r30180] reconfigure after fixing errorsAllen Byrne2016-07-121-18/+31
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* [svn-r29703] Updated test/Makefile.am to clean up file added in HDFFV-8740 fix.Dana Robinson2016-04-151-1/+1
| | | | Tested on: jam
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-041-1/+0
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26697] HDFFV-9131: Remove obsolete/unneeded sections.Allen Byrne2015-04-011-2/+0
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* [svn-r26582] Merge r26509 from trunkJerome Soumagne2015-03-251-2/+0
| | | | Run reconfigure after merges from autotools_rework branch
* [svn-r26395] Merges r26329 from trunkDana Robinson2015-03-091-5/+0
| | | | | | | | | | | | | | Removed the configure option that allows selective disabling of individual internal filters (fletcher32, shuffle, etc.). This feature mucked up the code with a lot of #ifdefs, saved very little space and was not scalable to a general scheme for library size reduction. We've decided to remove the feature while we investigate a more general scheme for decreasing the library size. Fixes: HDFFV-9086 Tested on: h5committest
* [svn-r26314] Brought autotools related changes from the trunk to the branch, ↵Scot Breitenfeld2015-02-261-1/+2
| | | | r26188 r26280
* [svn-r26304] bring 26303 from trunk:Mohamad Chaarawi2015-02-251-3/+3
| | | | remove files with .clog2 extension generated by MPE when doing make clean
* [svn-r26224] merge 26180 from trunk:vms_last_support_1_8Mohamad Chaarawi2015-02-181-1/+0
| | | | | | | | | | configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch: - Remove Infering parallel compilers (C and Fortran) from configure.ac - Remove restriction to build shared with parallel - Cleanup parallel sections in configure.ac - remove large file support checks - MPE fixes.
* [svn-r25402] Bring 25397/8 from trunk:Mohamad Chaarawi2014-07-101-1/+0
| | | | | | | - remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today. - fix bug in t_mpi.c (HDFFV-8856) tested with h5committest.
* [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll ↵Larry Knox2014-04-251-1/+0
| | | | | | | | back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked. Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines. Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
* [svn-r25033] Purpose:Dana Robinson2014-04-121-1/+2
| | | | | | | | | | | | | | | | | | Merged r24993 from the trunk. Adds core VFD write tracking functionality. When enabled, the core VFD will track dirty regions of the file and only write out the changed regions. The new H5Pget/set_core_write_tracking() API call controls this feature. A new "core_paged" VFD target was added to the check-vfd target in test/Makefile.am that runs all tests with the new write tracking functionality. Tested on: 32-bit LE linux (jam) 64-bit LE linux (koala) 64-bit BE linux (ostrich) Each platform was tested with HDF5_DRIVER set to "core" and "core_paged". Jam was also tested with the standard sec2 driver.
* [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunkAllen Byrne2014-04-071-72/+820
| | | | Tested: h5committest
* [svn-r24878] Description:Quincey Koziol2014-03-241-1/+0
| | | | | | | | | | | | | | | | | | | | | Bring r24864 from trunk to 1.8 branch: Remove all traces of MPI-POSIX VFD and GPFS detection/code. Remove remaining traces of stream VFD. Remove testpar/t_posix_compliant test (it's not actually verifying anything). Clean up H5D__mpio_opt_possible() further. Moved environment variable that disables MPI collective operations into MPI-IO VFD (instead of it being in src/H5S.c). A few other small code cleanups. Tested on: Mac OSX/64 10.9.2 (amazon) w/parallel & serial (daily tested on trunk)
* [svn-r24732] Fix for reconfigure, which fails because ↵Larry Knox2014-02-221-0/+1
| | | | | | LT_ADD_LIBHDF5_DEPENDENCY is used in Makefiles but the declaration in configure.ac is missing. Copied declaration from trunk. Tested with h5committest on jam ostrich koala and platypus(cmake).
* [svn-r24393] Cleanup testfiles from scripts. Update lists of files to be ↵Allen Byrne2013-11-011-1/+1
| | | | | | cleaned. CMake update to clean testfiles. Tested: local cmake, autotools
* [svn-r23702] Issue 8380 - H5Zunregister caused seg fault. This is a porting ↵Raymond Lu2013-05-141-5/+14
| | | | | | | | | of code from the trunk. It fixes the problem by first iterating through all opened datasets and groups to see if any of them uses the filter. If it finds one, the function fails with a message. Then the function flushes all opened files. Tested with h5committest.
* [svn-r23521] I merged the changes for testing groups with filter into this ↵Raymond Lu2013-04-021-18/+29
| | | | | | branch. Tested on jam and koala.
* [svn-r23512] Replace install-data-local with install-exec-hook in ↵Larry Knox2013-04-011-7/+8
| | | | | | | | test/Makefile.am. Change fixes order of chmod and rm for *dynlib* with parallel make. Tested in trunk.
* [svn-r23510] I merged the changes for DESY project from the trunk (r23496) ↵Raymond Lu2013-04-011-55/+175
| | | | | | into this 1.8 DESY branch. Tested with h5committest (duck failed with CMake because I don't know how to change test/CMakeLists.txt. I'll wait for Allen to do it).
* [svn-r23324] Snapshot version 1.8 release 11 (snap11)HDF Tester2013-03-041-1/+1
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* [svn-r22724] Convert tests to *.sh.in.Allen Byrne2012-08-281-15/+16
| | | | | | | | Convert configure.in to configure.ac. Align TESTS usage with autotools convention. Update all references from configure.in to configure.ac Tested: h5committest
* [svn-r22711] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, ↵Larry Knox2012-08-231-120/+173
| | | | | | libtool 2.4.2 Tested THG machines.
* [svn-r22488] Snapshot version 1.8 release 10 (snap4)HDF Tester2012-06-251-16/+18
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* [svn-r22228] Description:Quincey Koziol2012-04-011-24/+43
| | | | | | | | | Bring r22219 from trunk to 1.8 branch: (with release manager's blessing) Merge "file image" changes from feature branch back to trunk. Tested on: h5committested
* [svn-r21421] Merged the Fortran 2003 changes from the trunk into the 1.8 ↵Scot Breitenfeld2011-09-271-0/+3
| | | | | | | | | | | branch, used: svn merge -r 20506:21414 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran Tested: jam (gnu, intel, pgi compilers) Also merged effected non-Fortran files: svn merge -r21247:r21248 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/src/libhdf5.settings.in
* [svn-r21122] Description:Quincey Koziol2011-07-181-1/+1
| | | | | | | | | | | | | Bring r21120 from trunk to 1.8 branch: Check in ugly version of fix for Jira #7638. I'm going to leave the issue open in Jira and when the library has been refactored to use shared file pointers (instead of top file pointers) for file operations, I'll uncomment the check in src/H5Oshared.c Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too small for h5committest)
* [svn-r21044] Purpose:Mike McGreevy2011-06-281-1/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Fix HDFFV-7592 "Remove PACKEDBITS option from autotools files" Description: The code for h5dump's packed bits feature was conditionally compiled in via this option during its 'beta' release in 1.8.5. Now that the feature is fully supported, h5dump has since been changed to always compile the packed bits code (having removed the #ifdef H5_HAVE_H5DUMP_PACKED_BITS checks), so this option in configure is no longer needed. This commit removes the --enable-h5dump-packed-bits configure option, including the help summary from './configure --help' and the libhdf5.settings output summary, the PACKED_BITS Makefile variable, and the definition of H5_HAVE_H5DUMP_PACKED_BITS define in appropriate pubconf header files (which has already been removed from use in source code as of r20722). Note that this option was never added to the trunk, thus this commit only need occur on the 1.8 branch. Tested: - Configure output, help, & summary verified on jam - h5committested
* [svn-r21024] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the ↵Raymond Lu2011-06-231-1/+2
| | | | | | | | | | | | | whole MULTI file saved in the super block. We took it out in v1.8 library because it's meaningless for the MULTI file. v1.8 library saves the EOA for the metadata file, instead. But this caused some backward compatibility problem. v1.8 library couldn't open the file created with v1.6 library. I fixed the problem by checking the EOA value to detect the file created with v1.6 library. Tested on jam, koala, and linew.
* [svn-r20525] Description:Mike McGreevy2011-04-151-79/+104
| | | | | | | | Merge revisions 20475, 20502, and 20504 from trunk to 1.8 branch. Tested: Tested on jam, fred, bangan (CYGWIN), and h5committested.
* [svn-r20489] Bug 1386 - allow dimension size to be zero even though it isn't ↵Raymond Lu2011-04-131-2/+2
| | | | | | | | | | | | | | | | unlimited. I brought the changes from the trunk as below: 1. I added test cases for contiguous, compact, and chunked, and external storage datasets, and also attribute. The test includes dataspace selections. 2. I added a test case of extending dataset of zero dimension size and shrinking back to zero dimension size. 3. I updated the Makefile to include the new data file to be cleaned up. 4. The dataspace code has another bug - when the maximal dimension isn't passed in for H5Sset_extent_simple, it is supposed to be same as the dimension. The current library sets NULL to it. I corrected it and added a test case to it. 5. I corrected the tests of Fortran and C++ for the problem in point 3. Tested on jam, heiwa, and amani.
* [svn-r20114] Merge r20112 (open_file_pool) into 1_8 branch.Neil Fortner2011-02-171-18/+28
| | | | Tested: jam (open_file_pool branch tested with h5committest)
* [svn-r19862] Updated libtool to version 2.4, autoconf to version 2.68, and ↵Larry Knox2010-12-011-0/+3
| | | | | | m4 to version 1.4.15. Tested with h5committest on amani, jam and heiwa.
* [svn-r19824] 1. Made fixes as in rev #19813 in trunk:Vailin Choi2010-11-181-10/+21
| | | | | | | a) Add comments to test_4() in test/external.c about the name "/ link". b) Fix one memory leak in src/H5Lexternal.c: free memory pointed to by tmp_env_prefix for HDF5_EXT_PREFIX case. 3. Made changes for bug #1930 as in rev #19783, #19781 in trunk. 4. Made corresponding CMake changes as in rev #19782 in trunk.
* [svn-r19618] Purpose:Mike McGreevy2010-10-151-22/+31
| | | | | | | | | | Bring metadata accumulator fixes and tests into 1.8 Description: Changes consist of addition of tests for H5Faccum.c source code, as well as some fixes that address some discovered bugs in the metadata accumulator on several corner cases. Tested: h5committested
* [svn-r19408] In this revision the '/' after ${DESTDIR} wherever it occursLarry Knox2010-09-161-5/+15
| | | | | | | | | | | | | | | | | | | | has been removed. According to the official description of DESTDIR by Gnu at http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is prepended to the normal and complete install path that it precedes for the purpose of installing in a temporary directory which is useful for building rpms and other packages. The '/' after ${DESTDIR} will be followed by another '/' at the beginning of the normal install path. When DESTDIR is empty the path then begins with '//', which is incorrect and causes problems at least for Cygwin. The change made in config/commence.am affects many Makefile.*s when bin/reconfigure is run. EXAMPLEDIRs had to be corrected individually. Also the scripts to run examples after they are installed have checks added to see that the fortran and c++ directories are present before trying to run the scripts in them. Tested with h5committest on amani, heiwa and jam.
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