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* Merge fixes and code reconciliation wit developAllen Byrne2019-08-051-0/+9
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* Cleanup when merging to other branchesAllen Byrne2019-07-301-2/+2
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* Rework of the POSIX file open permissions and macros to clean upDana Robinson2017-04-281-3/+3
| | | | | | HDopen() calls. Also fixed a minor const warning in the core VFD.
* Changed the Windows POSIX open() file permissions to be correctDana Robinson2017-04-281-3/+3
| | | | according to MSDN. Partial fix for HDFFV-9630.
* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* [svn-r30219] Description:Quincey Koziol2016-07-221-4/+4
| | | | | | | | | More warning cleaups: down to 770 warnings (from ~940) in 134 files (from 148), with 28 unique kinds of warnings (from 31). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28568] Normalization of test/big.c with revise_chunks.Dana Robinson2015-12-111-8/+8
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r27851] Description:Quincey Koziol2015-09-221-6/+6
| | | | | | | | | Normalization changes that wouldn't otherwise be necessary if the VDS branch wasn't coming in shortly. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27800] Minor warning fixes in the library tests.Dana Robinson2015-09-161-1/+1
| | | | Tested on: jam (too minor for h5committest)
* [svn-r27768] Description:Quincey Koziol2015-09-141-3/+3
| | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
* [svn-r24358] Changed the big test so that it runs using the h5_fileaccess() ↵Dana Robinson2013-10-251-149/+171
| | | | | | | | | | | | fapl. The previous behavior was to execute a sec2, stdio, and family test everytime it ran, which was very inefficient under check-vfd. Tested on: 32- and 64-bit LE linux (jam and koala) 64-bit BE linux (ostrich) 64-bit OS-X 10.6 (fred)
* [svn-r24214] Put in proper error message if unexpected switch values happened.Albert Cheng2013-09-281-1/+2
| | | | Tested: h5committest.
* [svn-r24202] Bug fix: HDFFV-8271 Big.c error in address generated by random ↵Albert Cheng2013-09-261-1/+2
| | | | | | | | | | | | | | | | | | number. Description: There is a bug in the current big.c tests. In a nut-shell, the writing part randomly picks 50 locations and write 4KB from that location. Random location range is from byte 0 to end of dataset. There is the problem--if the random location is greater than (end of dataset - 4KB), then error. Solution: Adjust the random number to be at least 4KB less than the end of the dataset. That allows it write 4KB more from the generated starting position. Tested: h5comittest plus jam serial build and test.
* [svn-r23984] Merged 2 23932 from reduced_warnings branch:Larry Knox2013-08-091-1/+4
| | | | | | | | | | | | | | | | | Changes applied to eliminate several compiler warnings in the test directory in files: dt_arith.c filter_fail.c big.c dynlib2.c dynlib3.c Also an HDassert(0 && "Unknown type"); statement was added to all 29 combination s of case OTHER: default: See crucible review HDF5-145 for more details. Tested with h5committest.
* [svn-r22024] Add HD prefix to tools library based tests. Cleaned ↵Allen Byrne2012-03-051-289/+289
| | | | | | allocation/free in tests. Tested: local linux/ changes h5committetest against 1.8 version
* [svn-r19817] Bug 1917: Big.c test.Albert Cheng2010-11-171-43/+97
| | | | | | | | Changed the test to run Huge Dataset (tens of GB), Xtra large dataset(4GB big), Large dataset (2GB big), or merely 1GB big, depending on if the file system supports sparse file or if it supports larger than 32bigs I/O. Tested: h5committest, jam (serial), Windows (Bangan which is Windows 7, 32bits).
* [svn-r19795] Cleaned up some part of the code. It now works on all Unix and ↵Albert Cheng2010-11-161-36/+26
| | | | | | Windows 7 platforms.
* [svn-r19764] Updated NPROCS default value from 3 to 6.Albert Cheng2010-11-111-121/+223
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* [svn-r19167] Bug fix: 1917.Albert Cheng2010-08-031-5/+4
| | | | | | | | | | | | | | | | | | | Description: test/big incorrectly determined not able to write files larger than 2GB and skipped the SEC2 and STDIO driver tests. The reason was because it was using off_t while the SEC2 driver is using lseek64 which expects off64_t type. Solution: Created a new HDoff_t which is set to off_t or off64_t or other appropriate type depending on which of lseek or lseek64 is available. Changed SEC2 file driver and the big test to use this common definition. Tested: In BP (AIX), using --enable and --disable-largefile, for both 32 and 64 bits modes. Did not do h5committest because: 1. the error was exposed in the remote BP machine; 2. the change is trivial. Note that STDIO driver failed when --disable-largefile is used. That is an error in the STDIO driver code that is being fixed.
* [svn-r16847] Description:Quincey Koziol2009-04-231-6/+2
| | | | | | | | | | | | | Bring r16846 from revise_chunks branch back to trunk: Fix broken (for how long?) H5_ASSIGN_OVERFLOW macro to actually detect overflows during assignments, along with several errors it [now] detected. Cleaned up a fix minor warnings and/or pieces of code also. Tested on: FreeBSD/32 6.3 (duty) in debug mode (h5committest not needed - multi-platform test performed on branch)
* [svn-r16489] Fixed bug #1459 by eliminating the macro long_long and ↵Allen Byrne2009-02-181-4/+4
| | | | | | | | | | | replacing all instances with long long. Tested: h5comittest fedora 10 x64 Vista 32, VS2005, IVF101 XP32, Cygwin
* [svn-r15800] Description:Quincey Koziol2008-10-071-17/+22
| | | | | | | | | | | | | | | | | | | | | | | Bring file free space branch changes through r15795 into trunk, which includes a fair bit of code cleanup & rearrangement along with a couple of bug fixes also. Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r15628] Description:Quincey Koziol2008-09-161-1/+1
| | | | | | | | | | | | | Remove trailing whitespace from C/C++ source files, with the following script: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Tested on: Mac OS X/32 10.5.5 (amazon) No need for h5committest, just whitespace changes...
* [svn-r15007] Purpose: configure cleanupMike McGreevy2008-05-151-6/+0
| | | | | | | Description: cleaning up configure related to removal of --disable-hsizet flag, which we no longer support. Tested: kagiso
* [svn-r14199] Description:Quincey Koziol2007-10-111-4/+4
| | | | | | | | | | | | | | | | | | | | | Add H5Dcreate to API versioned routines, replacing internal usage with H5Dcreate2 Fix thread-safe error stack initialization for API versioned error stack printing routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14193] Description:Quincey Koziol2007-10-081-65/+70
| | | | | | | | | | | | | | | | | | | Make H5Dopen versioned and change all internal usage to use H5Dopen2 Add simple regression test for H5Dopen1 Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14104] Description:Quincey Koziol2007-08-231-1/+1
| | | | | | | | | | | | | Pursue calls to H5Gcreate() relentlessly and ruthlessly exterminate them, leaving only a few tame specimens in text files and comments. ;-) Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r13832] Some minor changes - let each driver use its own file name ↵Raymond Lu2007-06-041-2/+7
| | | | | | respectively. Tested on smirom because it's simple change.
* [svn-r13694] 1. changed the HDlseek to be lseek64 and HDfseek to be fseeko ↵Raymond Lu2007-04-231-4/+56
| | | | | | | | | if available, to support big files. 2. added a check in test/big.c to make sure the system supports big file. Tested on smirom because already tested the same changes for v1.6 on liberty, smirom, copper, and sol.
* [svn-r13605] Add big file test for SEC2.Raymond Lu2007-04-061-0/+19
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* [svn-r13596] Update document and comments. No test needed.Raymond Lu2007-04-051-1/+3
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* [svn-r13595] Add the macro check of H5_HAVE_FSEEKO for STDIO test. Without itRaymond Lu2007-04-051-1/+2
| | | | | | there'll be no big file support. Tested on smirom because it's a simple change.
* [svn-r13588] A support of files bigger than 2GB for STDIO driver. Configure ↵Raymond Lu2007-04-041-16/+34
| | | | | | | | will check if fseeko is available. Using it instead of fseek can support big files because the offset is of type off_t not long int. Also added the test for STDIO in big.c.
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-16/+16
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10508] James Laird2005-03-291-7/+36
| | | | | | | | | | | | | | | Purpose: Bug fix Description: test/big fails randomly with a message warning of 'possible overlap.' Solution: Have the random number generator check each value to make sure a write at that position doesn't overlap any previous write. Platforms tested: sleipnir, modi4, eirene
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r9039] Purpose:Quincey Koziol2004-08-061-5/+5
| | | | | | | | | | | | Code cleanup Description: At user's suggestion, convert some "naked" standard library calls to use the HD*() macros. Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r6601] Elena Pourmal2003-04-081-0/+17
| | | | | | | | | | | | | | | | | | Purpose: This a fix for bug #921 Description: On platforms where big test runs, it creates a set of "solid" 1GB files. Test will take forever (modi4) or will fail if quotas are exceeded. Solution: Default library behavior is to allocate dataset space earlier and to write fill values. I changed the test to use late space allocation and never write fill values. Platforms tested: True64 (PSC), modi4 (sequential and parallel), arabica with 64-bit option(test was skipped there). I also enabled szip and it passed :-) Misc. update:
* [svn-r6538] Purpose:Bill Wendling2003-03-311-3/+14
| | | | | | | | | | | | | Update Description: Updated the Copyright statement Platforms tested: Linux (This change is only in the comments, so I just check that the modules still compile) Misc. update:
* [svn-r6296] Purpose:Quincey Koziol2003-01-171-6/+6
| | | | | | | | | | Code cleanup Description: Reduce warnings on Windows Platforms tested: FreeBSD 4.7 (sleipnir)
* [svn-r5278] Purpose:Albert Cheng2002-04-281-1/+1
| | | | | | | | | | | | | | | | | | | | | Migrate from configure macros of XYZ_ABC to H5_XYZ_ABC Description: configure generates many macros definitions on the fly and were stored in src/H5config.h which is included by H5public.h. But other software that uses hdf5 may also run their own configure. There can be a clash in macro name space. We decided awhile ago to prepend all generated macros with "H5_" to avoid conflicts. The process has started and this commit completes it (at least attempt to). Solution: Many macros symbols (e.g. SIZEOF_xxx and HAVE_xxx were changed to H5_SIZEOF_xxx and H5_HAVE_xxx). Then H5private.h no longer includes H5config.h. This cuts H5config.h away from HDF5 source code. Pending issues: The module of fortran and pablo are to be resolved in a different commit. Platforms tested: eirene (parallel), arabica (solaris 7 --enable-fortran, --enable-cxx)
* [svn-r5219] Purpose:Quincey Koziol2002-04-221-2/+4
| | | | | | | | | | Code cleanup Description: Clean up warnings from gcc 3.1 Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5207] Purpose:Albert Cheng2002-04-191-30/+46
| | | | | | | | | | Feature Description: Added option -c to allow skipping file system Checking. This allows users to run the test even if the program thinks it may fill up the file system. Platforms tested: eirene
* [svn-r5205] Purpose:Albert Cheng2002-04-191-1/+1
| | | | | | | | | | | | | | Code cleanup Description: Platform dependent code related to the struct stat and fstat calls polluted source codes. Hard to maintain. Solution: Platform dependent code are moved to H5private.h and then internal code can #include H5private.h. Repeat those macro definition for the stdio and multi drivers since they area examples for writing a virtual file driver. They must not use any internal code. Platforms tested: eirene (parallel), modi4 (serial including gass driver.)
* [svn-r5200] Purpose:Quincey Koziol2002-04-181-1/+1
| | | | | | | | | | Code Cleanup Description: Clean up compiler warnings from the last bunch of checkins Platforms tested: FreeBSD 4.5 (sleipnir)
* [svn-r5113] Purpose:Albert Cheng2002-03-281-8/+74
| | | | | | | | | | | | | | | feature Description: Added -fsize <fsize> option which controls the family file size used. This can be used to test the file size limits of a machine or file system. Platforms tested: modi4 (passed even 20GB file size). Eirene (started to fail when 2GB is used. Expected since linux 2.2 does not support large than 2GB file size.) burrwhite (passed up to 4GB. Expected since Linux 2.4 supports larger than 2GB file size.) Then it failed at 4GB and beyond. This is probably a bug in the family file driver.
* [svn-r4568] Purpose:Quincey Koziol2001-10-231-2/+2
| | | | | | | | | | | | | | | | | Code cleanup Description: I had moved an fclose() in my earlier fix and it could lead to a resource leak in certain error conditions. Also, prepared file for Albert to expand to test with files larger than 2GB... :-) Solution: Moved fclose() call back to original position. Put in type cast for FAMILY_SIZE macro. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4564] Purpose:Quincey Koziol2001-10-231-2/+3
| | | | | | | | | | | | Bug fix Description: 'big' test was not detecting that the AFS quota had been hit when running under FreeBSD. Solution: Amending quota checking code to detect errors on file closes as well as opens, seeks and writes. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4312] Purpose:Quincey Koziol2001-08-061-8/+0
| | | | | | | | | Feature shift Description: Take out the v1.2.x compatibility stubs and put in the hooks for v1.4.x compatibility when needed. Platforms tested: FreeBSD 4.3 (hawkwind)
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