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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+5
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* Final merge of page buffering branch to developQuincey Koziol2017-03-141-8/+41
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* Minor cleanups and bring over "prefetched dirty" fixes for entries loaded fromQuincey Koziol2017-03-121-1/+57
| | | | a cache image.
* Cleanups and normalizations against incoming page_buffering changes.Quincey Koziol2017-02-201-3/+4
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* HDFFV-10124 Using cache_common.h contains other include filesAllen Byrne2017-02-021-3/+0
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* Updated the cache_tagging test so it correctly analyzesDana Robinson2016-11-301-174/+39
| | | | | | | the new fractal heap free space manager behavior. Also converted the debug output of the cache_tagging test to use the revised H5AC_dump_cache() function.
* Switch to new, more scalable, metadata cache entry tagging.Quincey Koziol2016-11-071-554/+421
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* Code style and warning cleanups, from revise_chunks branch.Quincey Koziol2016-11-061-168/+70
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* [svn-r30002] Fixed some minor warnings in H5AC.c and H5C.c, cleaned up warningsDana Robinson2016-06-011-52/+115
| | | | | | | | in the cache tests, and made some huge static arrays dynamic in the cache tests. Tested on: 64-bit Ubuntu Linux w/ gcc 5.3.1 Autotools serial
* [svn-r29081] - merge in the phdf5_metadata_opt/ branch with the collective ↵Mohamad Chaarawi2016-02-101-7/+7
| | | | | | | | metadata optimizations. - rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library tested on bb-8 with parallel and serial.
* [svn-r28950] - remove META_FLUSH_COLLECTIVELY property for delayed sanity ↵Mohamad Chaarawi2016-01-211-7/+7
| | | | | | | | | | checks from metadata dxpls - remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead. - remove flush_me_collectively flag from cache entries - add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit. tested on BB-8 with serial and parallel.
* [svn-r28678] Updated the cache_tagging test to correctly output tags inDana Robinson2015-12-161-62/+62
| | | | | | | the debug/verbose function. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28606] Description:Quincey Koziol2015-12-131-0/+3
| | | | | | | | | | Revisions to normalize revise chunks vs. trunk, plus push dataset metadata changes into the cache immediately (instead of holding them within the dataset data structures). Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r27768] Description:Quincey Koziol2015-09-141-0/+10
| | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
* [svn-r27237] Description:Quincey Koziol2015-06-181-3/+3
| | | | | | | | | Merge v3 metadata cache changes to trunk. Yay! :-) Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (daily tested on branch)
* [svn-r27084] Description:Quincey Koziol2015-05-151-30/+31
| | | | | | | | Clean up cache tests, to align w/v3 metadata cache changes Tested on: MacOSX/64 10.10.3 (amazon) w/serial & parallel Linux/32 2.6.* (jam) w/serial & parallel
* [svn-r25496] Description:Quincey Koziol2014-07-301-1/+1
| | | | | | | | | Merge 64-bit ID changes from branch to trunk. (Plus a few minor cleanups that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r22676] Changes needed to make the default free-list mapping from ↵Vailin Choi2012-08-131-2/+16
| | | | H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY.
* [svn-r22646] Description:Quincey Koziol2012-08-081-4/+4
| | | | | | | | | Changes resulting from Klocwork static analysis tool, from Mark Miller @ LLNL (miller86@llnl.gov). Tested on: Mac OS X/64 10.7.4 (amazon) w/debug, C++ & FORTRAN, using gcc 4.7.x (too minor to require h5committest)
* [svn-r19114] Description:Quincey Koziol2010-07-201-1/+1
| | | | | | | | | Rename H5AC_set() to H5AC_insert_entry() Get rid of H5C_set_skip_flags() & related flags Tested on: Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel (too simple to require h5committest)
* [svn-r19017] Purpose:Mike McGreevy2010-06-171-4/+3
| | | | | | | | | | | | | | | | Minor code cleanup Description: Add missing declaration of H5AC_ignore_tags() to H5ACprivate.h Clean up some warnings in cache_tagging.c test file Tested: jam, gandalf
* [svn-r19008] Purpose:Mike McGreevy2010-06-161-14/+14
| | | | | | | | | | | | | | | | | Fix some tagging issues. Description: - changed H5Gcreate to H5Gcreate2 in the cache_tagging.c test file to work properly with 1.6 API default mapping turned on. - Added FUNC_ENTER/LEAVE_*TAG macros to the H5G_stab_valid function. Tested: gandalf, jam, amani (w/ production mode, 1.6 API mapping)
* [svn-r19005] Purpose:Mike McGreevy2010-06-151-0/+3990
Commit metadata tagging framework. Description: This check-in contains a new framework whose goal is to apply a tag value to each new entry in the metadata cache as it is created. This tag value is such that it relates each piece of metadata to the HDF5 object that it belongs to (dataset, group, et cetera). This changeset includes the framework that applies the tags as well as a suite of tests to verify correct tag application, though does not yet make use of the tag values to flush/evict individual objects. Please refer to the "flush/evict individual objects" RFC for further discussion of these changes. Tested: jam, amani, linew (h5committest) liberty, abe, blue print
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