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* Add flag to H5CX_pop that allow setting the properties to return to ↵Quincey Koziol2020-12-011-2/+2
| | | | application to be skipped. (#134)
* Basic alignment with async branch (#115)Quincey Koziol2020-11-231-15/+15
| | | | | | | * Basic alignment with async branch - trivial changes to reduce clutter in overall diff. * Update minor error code to reflect change within library * Update the error output to match library
* HD prefix updates in src/ and test/Dana Robinson2020-10-241-21/+21
| | | | | | | Adds missing HD prefixes to API calls in src and test. Adds some extra processing to bin/checkposix to keep the noise levels down when running the script (not comprehensive).
* Clang-format of source filesAllen Byrne2020-09-301-5556/+6827
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* Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experimentDavid Young2020-09-031-8/+109
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| * Fix HDFFV-11101Binh-Minh Ribler2020-08-171-0/+3
| | | | | | | | | | | | | | | | | | | | | | Description Added initialization to local structs in the src function H5MF_settle_raw_data_fsm() and the test function test_bt2_hdr_fd() to prevent the following error in two different occurrences: MemorySanitizer: use-of-uninitialized-value Platforms tested: Linux/64 (jelly) Linux/64 (platypus)
| * Merge pull request #2771 in HDFFV/hdf5 from ↵Binh-Minh Ribler2020-08-161-0/+98
| |\ | | | | | | | | | | | | | | | | | | | | | | | | ~BMRIBLER/hdf5_bmr:hdf5_bmr_HDFFV-10933 to develop Fixed HDFFV-10933 * commit '16349c5fddce8a74644e18d01d7ea8186aaaa255': Fixed HDFFV-10933
| | * Fixed HDFFV-10933Binh-Minh Ribler2020-08-141-0/+98
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Description: Updated the original fix by Kent Y. in commit 200a77d8c3e51663c375aafffff607ae9b438f4e - used internal functions instead of public API - moved some code into the subroutine for a cleaner look. - added test to dsets.c Platforms tested: Linux/64 (jelly)
| * | Trivialities noticed while merging things to 1.10Dana Robinson2020-08-151-7/+7
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| * Removes staff email addresses from the repositoryDana Robinson2020-08-071-1/+1
| | | | | | | | Removes redundant C library headers from hl library
* | Squash my changes on branch `fprintf-experiment` into one commit forDavid Young2020-07-071-2/+2
|/ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | reapplication to my new warnings branch, `warnings-again`. These changes are included: commit 915551b7bf64e777dd2007386ec77b1d117770da Merge: 63858c2 a8892bb Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:39:49 2019 -0600 Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment commit a8892bb42d6f6e4fbc30fae0eb2b957f81c938b9 Merge: 5c911d8 f907b51 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:33:54 2019 -0600 Merge pull request #2055 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop * commit 'f907b511d06612dafc7814a7c30f2f3d2b76d52b': Oops, remove more C99 designated initializers for VS 2010 compatibility. commit 63858c22e168acaec0af8ced6641f26102cc6bb0 Merge: 20ae787 5c911d8 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 17:04:42 2019 -0600 Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment commit 5c911d8baf3ee7fe654269088eebdf07f59a8192 Merge: b8a5671 62208b0 Author: David Young <dyoung@hdfgroup.org> Date: Mon Nov 25 16:58:27 2019 -0600 Merge pull request #2030 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop * commit '62208b056a09c01855fbac7f75146be58ad6bfe5': (44 commits) Add an #include to get a function declaration. Don't use C99 designated initializers, they're not compatible with Visual Studio 2010. Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*. This is more code that may not compile with VS2010, *sigh sigh*. Always warn on maybe-uninitialized. -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using. Only promote maybe-uninitialized warnings to errors on GCC 8. Even on GCC 8, there may be false positives at low optimization levels? I need to check. Only use -Werror=cast-function-type with GCC 8 and later. Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags. Add new source files to CMakeLists.txt. Mention the -Werror= flags in libhdf5.settings.in. free -> HDfree Promote decleration-after-statement warnings to errors. Quiet decleration-after-statement warnings. Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements. Document H5D__chunk_mem_xfree_wrapper(). Undo accidental test deletion. Oops, delete a debug printf that snuck in here. Undo my changes to the HD macros, hadn't really intended those to be on this branch.... Make errors of some more warnings. Move disabled warnings to DEVELOPER_WARNING_CFLAGS. Put just one warning option on a line, and sort some of the options. Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *. Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays. Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc. ... commit 20ae7877e33931b95e8c3502b027d6c3fe94a11f Merge: 46f8c61 edd5297 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:34:09 2019 -0600 Merge remote-tracking branch 'origin/add-werror-and-squash-some' into fprintf-experiment commit 46f8c613d5117a8be5bc8385a072daa0b4262f06 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:29:00 2019 -0600 GCC really wants us to use `ll` to format `long long`, so try to make that work before any other format modifier. Seems like we're not compiling the autoconf test program with -Werror=format ? Probably should. commit eee35b8ef3759c391327cd48a9b3c56b6f8abc99 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:28:05 2019 -0600 It's hard to know just how wide an HDoff_t will be, and I don't think POSIX or C standards provide a PRI macro for it, so cast to intmax_t and format using PRIdMAX. commit 86eab12df7a89b546a38e99f8178dd2adbcb3433 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 15:26:25 2019 -0600 URemove some casts.se the right format string for the argument. Here and there stop casting a printf argument. commit f722f7cbecbaa99449941484b014426f62f1bed5 Merge: 58e3743 6d5ec83 Author: David Young <dyoung@hdfgroup.org> Date: Fri Nov 22 14:44:16 2019 -0600 Merge branch 'add-werror-and-squash-some' into fprintf-experiment commit 58e3743b7faa9836606ee91798fe80dfc0040da7 Author: David Young <dyoung@hdfgroup.org> Date: Wed Nov 20 21:07:21 2019 -0600 Remove custom HDfprintf implementation, using the standard library's, instead. Take a swipe at repairing fprintf format strings, mainly replacing "%Hu" with "%" PRIuHSIZE, "%a" with "%" PRIuHADDR, "%Zu" with "%zu". Here and there remove an awkward cast of a printf argument to `long long` and use PRI[doux]8, PRI[doux]32, or PRI[doux]64, instead. Change occurrences of "%t" to "%s" and perform a suitable change of argument, `cond` -> `cond ? "TRUE" : "FALSE"`. Some occurrences of %Hu, %a, and %t remain, they just weren't flagged by the compiler because of #ifdef'age. commit d4366909293fa970c23512ac80e5d865d76cddbf Author: David Young <dyoung@hdfgroup.org> Date: Wed Nov 20 20:54:32 2019 -0600 Promote format-string warnigns to errors.
* Avoid allocating a chunk index for datasets with 0-sized dimensions, untilQuincey Koziol2020-05-011-19/+212
| | | | the dataset is extended.
* Trim trailing whitespaceQuincey Koziol2020-04-201-6/+6
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* testpar/t_2Gio.c: Fix a typo that I think was introduced by aDavid Young2020-01-291-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | previous warnings PR. An array element was assigned to itself---shape[2]Â =Â shape[2];---instead of being assigned to chunk[2]. fortran/src/H5Pf.c: move conditional compilation controlled by H5_NO_DEPRECATED_SYMBOLS outside of a function for readability. fortran/src/H5match_types.c: put a variable's declaration under the same conditional compilation (H5_FORTRAN_HAVE_C_LONG_DOUBLE) as its use. For now, skip compilation of some unused debug dump routines in the JNI. While I'm in the JNI, delete a set-but-unused variable. src/H5Z.c: condition a variable declaration on H5_NO_DEPRECATED_SYMBOLS so that it's not declared but unused or vice versa. test/cache_common.h: add an #include in to get some symbols we need to avoid implicit declaration warnings. test/dsets.c: use a more conventional conditional-compilation syntax. test/dt_arith.c, test/fillval.c: initialize a bunch of uninitialized variables before use. test/vfd.c: pass the expected type of `void **` to posix_memalign(3) instead of `int **`. testpar/t_bigio.c: explicitly compare with 0 instead of using ! when "equal to 0?" is the question not "is false?" Repair some indentation while I'm here. testpar/testpar.h: repair misaligned line-continuation backslashes in a macro that probably should be a function so that we don't have to fiddle with the line continuation to begin with. tools/src/h5repack/h5repack_main.c: fix some compiler fussing about enums. tools/test/perform/pio_engine.c: the compiler fusses if you cast a function call returning double directly to off_t. It's ok if you cast a variable that's a double to off_t, however. Write and use a new function, sqrto(), to avoid the cast warnings.
* Revert "Revert "Moved -Wunsuffixed-float-constants to the developer warnings.""Dana Robinson2020-01-231-10/+10
| | | | This reverts commit 6486e06545bf637d46e18a787395542f4fca143a.
* squash cast warning fixkmu2020-01-231-12/+12
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* merge and fixkmu2020-01-211-227/+510
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| * Merge branch 'develop' into stack_size_warningsDana Robinson2020-01-171-23/+27
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| | * Squashed commit of the token_refactoring branch:Dana Robinson2020-01-161-23/+27
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| * | Tidying from code review.Dana Robinson2020-01-161-6/+20
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| * | Fixed stack and frame size warnings. Not complete, but fixes most ofDana Robinson2020-01-151-204/+469
| |/ | | | | | | the easier cases.
* | merge and fix conflictkmu2020-01-191-1/+1
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* | merge and fix conflictskmu2020-01-141-13/+17
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| * Merge pull request #2071 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/intel_warnings ↵Kimmy Mu2020-01-061-4/+4
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit '0a2bb11b248df6841daabca3970df5d8504adfc7': address problems from comments fix and address comments change according to previous comments add missing piece remove unnecessary check macro fix intel compile warnings Revert "fix warnings from Intel compiler" Revert "fix warnings and some text alignment" Revert "let hdf5 pick up the right compiler in Intel environment" Revert "fix issues from previous PR comments" Revert "using a different MACRO" using a different MACRO fix issues from previous PR comments let hdf5 pick up the right compiler in Intel environment fix warnings and some text alignment fix warnings from Intel compiler
| | * Merge branch 'develop' into bugfix/intel_warningskmu2019-12-091-16/+17
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| | * | remove unnecessary check macrokmu2019-12-061-4/+4
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| | * | fix intel compile warningskmu2019-12-041-4/+4
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| * | | Small changes from the token_refactoring branch, to reduce the delta to developQuincey Koziol2020-01-041-7/+10
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| * | | Remove constAllen Byrne2019-12-181-1/+1
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| * | | Fix compile error - declaration after executable statementAllen Byrne2019-12-181-2/+3
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* | | fix unused related warningskmu2020-01-131-4/+4
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* | Yanked -Wc++-compat from the flags used to build the C library in bothDana Robinson2019-12-041-12/+12
| | | | | | | | the Autotools and CMake.
* | Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings ↵David Young2019-11-271-4/+5
|/ | | | level and fixing some code.' (commit 5c911d8baf3)"
* Quiet decleration-after-statement warnings.David Young2019-11-131-5/+4
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* Use HD prefix.David Young2019-11-121-8/+8
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* Fix HDFFV-10937: use a more reliable (and probably faster) scheme forDavid Young2019-10-281-32/+121
| | | | visiting all elements of a matrix in an arbitrary order.
* Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()Jerome Soumagne2019-10-081-2/+2
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* Fixed some exit calls.Dana Robinson2019-09-071-4/+3
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* Merge reconciliation and VFD test fixesAllen Byrne2019-08-041-259/+260
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* Merge cleanup mostly whitespaceAllen Byrne2019-07-301-120/+125
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* Add support for GCC 7.x warnings, update warnhist script to account for them,Quincey Koziol2019-06-211-6/+10
| | | | clean up warnings.
* Set V112 as the latest format and extend the arrays of version bounds.Vailin Choi2019-04-041-1/+1
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* Used the H5_INC_ENUM macro to squash enum value increment warnings.Dana Robinson2019-03-211-6/+6
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* Remove "bad" statements at end of TEST_ERROR.Jacob Smith2019-01-041-24/+17
| | | | Formerly arguments to FAIL_PUTS_ERROR
* Add semicolon at end of TEST_ERROR() invocation for consistency.Jacob Smith2019-01-041-1/+1
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* Change FAIL_PUTS_ERROR to TEST_ERROR.Jacob Smith2019-01-041-17/+17
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* Fix mistake with H5E_BEGIN_TRY {...} H5E_END_TRY block containing ↵Jacob Smith2018-12-201-15/+26
| | | | | | ERROR-raising macros. Formatting tweaks.
* Formatting adjustments.Jacob Smith2018-12-181-226/+217
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* Merge branch 'develop' into dset_ohdr_minimizeJacob Smith2018-12-181-1/+8
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* | Re-format test/ohdr_mindset.cJacob Smith2018-12-141-1/+1
| | | | | | | | Fix a few transcription errors in other test files.
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