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* Merge reconciliation and VFD test fixesAllen Byrne2019-08-041-27/+27
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* Updates to warnhist script, along with a few cleanups, and add some commentsQuincey Koziol2019-07-101-0/+9
| | | | to warning cleanups that are a bit obscure.
* Brings H5Z and H5PL packages in sync with VOL integration branch.Dana Robinson2017-11-171-213/+203
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* Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* [svn-r30292] Description:Quincey Koziol2016-08-161-1/+1
| | | | | | | | Correct failure on older Windows compilers. Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30285] Description:Quincey Koziol2016-08-131-5/+5
| | | | | | | | | More warning cleanups, bringing the build down to 25 unique types of warnings, with 550 warnings in 122 files (down from 28, 770, and 134). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28861] Minor warning format string fix (HDFFV-9640).Dana Robinson2016-01-121-2/+2
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools parallel only (MPICH 3.1.4)
* [svn-r27768] Description:Quincey Koziol2015-09-141-1/+1
| | | | | | | | | | | | | | | | | | | | | | Complete revamp of package initialization/shutdown mechanism in the library. Each package now has a single init/term routine. This new way should avoid packages being re-initialized during library shutdown and is also be _much_ more proactive about giving feedback for resource leaks internal to the library. Introduces a new "module" header file for packages in the library (e.g src/H5Fmodule.h) which sets up some necessary package configuration macros for the FUNC_ENTER/LEAVE macros. (The VFL drivers have their own slightly modified version of this header, src/H5FDdrvr_module.h) Also cleaned up a bunch of resources leaks all across the library and tests, along with addressing many warnings, as I encountered them. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/64 3.10.x (kituo) w/serial & parallel Linux/64 2.6.x (ostrich) w/serial
* [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-011-1/+1
| | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r25496] Description:Quincey Koziol2014-07-301-1/+1
| | | | | | | | | Merge 64-bit ID changes from branch to trunk. (Plus a few minor cleanups that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r20971] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-131-2/+3
| | | | | | say which filter isn't registered. This is the follow-up commit. The previous way to construct the name of the existent data file wasn't very safe. It could be cleaned up if any user builds the library in the source directory. Tested on jam - simple change.
* [svn-r20944] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-071-14/+15
| | | | | | say which filter isn't registered. This is the follow-up commit. In my previous commit, I changed HDsnprintf to snprintf, which caused trouble for Windows because the name is _snprintf instead. So I changed it back to HDsnprintf for properly defined macro. I also changed all fprintf to HDprintf to be consistent. Tested on jam - simple change.
* [svn-r20934] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-061-6/+8
| | | | | | | | say which filter isn't registered. This is the follow-up commit (20929 and 20930). The check-vfd in Makefile has trouble with the file name. Because the test file is pre-generated, I use the default FAPL to create the full file name to avoid some driver test. Tested on jam - simple change.
* [svn-r20929] Issue 4278 - When reading data fails, the error message should ↵Raymond Lu2011-06-031-5/+64
| | | | | | say which filter isn't registered. The fix is simple. Most of the effort is on the test. The file with filter enabled is created in gen_filter.c. The verification of the error message is in test_error.c. The output is compared against the standard output. Tested on jam, koala, and heiwa.
* [svn-r19481] I'm backing out my fix for bug 1707 because there're some ↵Raymond Lu2010-09-271-1/+6
| | | | | | | | | | | unresolved issues - r19441 and 19467. Bug 1707 is that H5Eset_auto causes a seg fault when an application uses -DH5_USE_16_API with the 1.8 library to compile. I created a branch off the trunk called set_auto to continue working on the problem. Tested on jam - backing out, simple.
* [svn-r19457] Bug fix for 1707 - H5Eset_auto causes a seg fault when an ↵Raymond Lu2010-09-211-6/+1
| | | | | | | | | | | | | application uses -DH5_USE_16_API with the 1.8 library to compile. The cause is from the mismatch of H5Eprint1 and H5Eprint2 set through H5Eset_auto. I changed the union in the structure H5E_auto_t. Another change is to make H5Eget_auto fail if H5Eset_auto is called to set the printing function. I'll write a document for it. Tested on heiwa, jam, and amani. The property change in configure.in, config, and Makefile.am came from the merge of the 1.8 library change.
* [svn-r19396] Description:Quincey Koziol2010-09-161-1/+0
| | | | | | | | | | | | | | | | | | | | | | | | Bring back various modifications to the v2 B-trees that were introduced in the revise_chunks branch but aren't dependent on any file format or API changes. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, w/threadsafe, in production mode Linux/PPC 2.6 (heiwa) w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.4 (amazon) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r19354] Quincey and I made H5Eset_current_stack also close the stack to ↵Raymond Lu2010-09-071-0/+65
| | | | | | | | be set. This is to avoid H5Eclose_stack clearing the default stack. Please see bug 1799. Tested on jam - simple change.
* [svn-r18300] Description:Quincey Koziol2010-02-201-10/+19
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring Coverity fixes from branch to trunk: r18282: Fix Coverity issue #428 by wrapping testing calls with if(pass) {} block. r18283: Fix Coverity issue #425 by wrapping test calls in if(pass) {} block r18284: Issue 166: init_error() malloc'd 3 pointers in initialization and never freed inc ase of errors. Init pointers to NULL, check allocation results and free allocations in error block r18285: Fix Coverity issue #410 by wrapping test calls with if(pass) {} block. r18286: Issue 165: custom_print_cb() needed allocations freed in error block. r18287: Fix coverity issue # 409 Added if (pass) checks around calls to flush_cache. Additionally, added a check for file_ptr = NULL after call to setup_cache. r18288: Fix coverity# 107 free fh in H5HF_close() correctly before exit the function even when failure occurs. r18289: Fix Coverity issue #429: correct failure return values to match return type from routine. r18290: Fix Coverity issue #103: release allocated indirect section on error r18294: Issue 153, 152: Check allocations and free allocations in error block. Also cleaned up hid_t identifer that were opened in error block. r18295: Fix coverity# 101 free new_loc in H5HF_man_iter_start_entry() correctly before exit the function even when failure occurs r18296: Fix coverity# 100 free down_loc in H5HF_man_iter_down() before exit the function when failure occurs r18297: Fixed coverity issues 54, 55 and 216. Correctly handle the various ways that allocation of attr_name can fail in test_attr_basic_write. r18298: Fix coverity# 119 free object in H5HG_read() before exit the function when failure occurs r18299: Fix coverity issue #112: Add cleanup during error handling of H5MP_create. Tested on: Mac OS X/32 10.6.2 (amazon) w/debug & production Misc. Linux configurations (on original checkins)
* [svn-r18197] Description:Quincey Koziol2010-01-301-1/+1
| | | | | | | | | Trim trailing whitespace from source code files with this command: find . \( -name "*.[ch]" -or -name "*.cpp" -or -name "*.f90" \) -print |xargs -n 1 sed -i "" 's/[[:blank:]]*$//' Tested on: None - eyeballed only
* [svn-r16835] Allow an error class to use other class's major or minor ↵Raymond Lu2009-04-221-11/+20
| | | | | | errors. Added a test for it, too. Tested on jam - simple change.
* [svn-r16560] Description:Quincey Koziol2009-03-101-2/+2
| | | | | | | | | | Remove another call to H5E_clear_stack() from within the library. Clean up lots of compiler warnings. Tested on: Mac OS X/32 10.5.6 (amazon) (followup on other platforms forthcoming)
* [svn-r16006] Modify the commit of r15943 for H5_USE_16_API. Let H5version.h ↵Raymond Lu2008-10-301-6/+6
| | | | | | check if H5_USE_16_API_DEFAULT is defined by the configure. Then define H5_USE_16_API and use it throughout. Tested on kagiso - supposed to be simple.
* [svn-r15943] Changed the library's macros H5_USE_16_API to ↵Raymond Lu2008-10-241-6/+6
| | | | | | | | | H5_USE_16_API_DEFAULT avoid possible conflict wi th user's definition of H5_USE_16_API. The H5_USE_16_API_DEFAULT is defined through configure with the flag --with-default-api-version=v16. Tested with h5committest.
* [svn-r14230] Description:Quincey Koziol2007-11-011-1/+56
| | | | | | | | | | | | | | | | | | | Add H5Ecreate_stack() API routine, to fill a minor gap in the error routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r14199] Description:Quincey Koziol2007-10-111-4/+4
| | | | | | | | | | | | | | | | | | | | | Add H5Dcreate to API versioned routines, replacing internal usage with H5Dcreate2 Fix thread-safe error stack initialization for API versioned error stack printing routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14097] Description:Quincey Koziol2007-08-211-11/+16
| | | | | | | | | | | | | First real use of API versioning code, H5E routines switched to use new API versioning scheme. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r13648] Description:Quincey Koziol2007-04-121-134/+115
| | | | | | | | | | Rename new error handling API routines from H5E<foo>_stack() to H5E<foo>2(). Tested on: Mac OS X/32 10.4.9 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty)
* [svn-r13580] Description:Quincey Koziol2007-04-031-2/+2
| | | | | | | | | | | | Add version # and flags to external link format (as fields in a single byte), in order to accomodate future changes/expansions. Tested on: Mac OS X/32 10.4.9 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty)
* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r12345] Purpose: Codes for backward compatibility.Raymond Lu2006-05-121-3/+3
| | | | | | | | | | Description: Function prototype H5E_walk_t and structure H5E_error_t wasn't backward compatible. Solution: Make them compatible with v1.6 and provide new definitions of H5E_walk_stack_t and H5E_error_stack_t. Platforms tested: fuss and h5committest.
* [svn-r11886] Purpose:Quincey Koziol2006-01-231-3/+3
| | | | | | | | | | | | | Code cleanup Description: Check in some of the code cleanups from working on the external link support. (This doesn't include any of the external link features) Platforms tested: FreeBSD 4.11 (sleipnir) Mac OSX.4 (amazon) Linux 2.4
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-45/+45
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r9839] Purpose:Quincey Koziol2005-01-191-11/+90
| | | | | | | | | | | Bug fix Description: Don't print very long description, check that it's correct internally. Platforms tested: Linux 2.4 (heping) Solaris 2.7 (arabica)
* [svn-r9825] Purpose:Quincey Koziol2005-01-141-2/+17
| | | | | | | | | | | | Bug fix Description: Fix possible overrun in error description string by allocating large enough string on the fly. Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r9234] Purpose:Quincey Koziol2004-09-091-2/+2
| | | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Tweak recent "forward compatibility" changes to the H5E* API (which allowed for the old H5E API functions to remain unchanged) by allowing for the error stack callback function (H5E_auto_t) to also remain unchanged from the 1.6 branch. This required changing the H5E{get|set}_auto routines to have the old style H5E_auto_t type (which didn't have a stack ID parameter) and the new H5E{get|set}_auto_stack routines to have a newer "H5E_auto_stack_t" type (which has a stack ID parameter). This should make the H5E API changes as forwardly compatible as possible. One side-affect of this change was that it was impossible to determine if the current auto error callback was the old style (H5E_auto_t) or the new style (H5E_auto_stack_t) of callback, so a new API function (H5Eauto_is_stack) was adde to query this. Platforms tested: FreeBSD 4.10 (sleipnir) IRIX64 6.5 (modi4) h5committest
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-011-16/+15
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r8383] Purpose:Quincey Koziol2004-04-181-5/+5
| | | | | | | | | | | | | Code cleanup Description: Clean up lots of warnings based on those reported from the SGI compilers as well as gcc. Platforms tested: SGI O3900, IRIX64 6.5 (Cheryl's SGI machine) FreeBSD 4.9 (sleipnir) w/ & w/o parallel h5committest
* [svn-r7507] *** empty log message ***Raymond Lu2003-09-241-0/+489
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