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* Hdf5 1 10 merge of printf specifiers and VS2015 min changes (#612)Allen Byrne2021-04-301-5/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * HDFFV-10865 - merge from dev, HDFArray perf fix. * Remove duplicate setting * Whitespace changes after clang format * Undo version 11 clang format changes * Merge CMake changes from develop * test testing script merge from develop * Update supported platforms * PR#3 merge from develop * Merge gcc 10 diagnostics option from develop * Merge #318 OSX changes from develop * Merge small changes from develop * Minor non-space formatting changes * #386 copyright corrections for java folder * Merges from develop #358 patches from vtk #361 fix header guard spelling * Merge updates #358 patches from vtk #361 fix header guard spelling * format fix * Fix missing underscore and make H5public.h closer to dev * Merges from develop #340 clang -Wformat-security warnings #360 Fixed uninitialized warnings header guard underscore cleanup JNI cleanup * format alignment * Add missing test ref file * Merge #380 from develop * Finish java merges from develop * Fix java issues with tests and javadoc * Correct use of attribute access plist * Remove debug code * Remove unused variable * Change file access to read only for java tests * Split clang format operations. * More javadoc comments * Remove pre-split setting * format source * Change windows TS to use older VS. * Mostly all javadoc fixes, one argument rename. * synch file * Merge of long double fix and compiler flags * HDFFV-11229 merge changes from develop * HDFFV-11229 correct test script * HDFFV-11229 update autotools test script for two ref files * HDFFV-11229 merge dev changes for long double display in tools * Committing clang-format changes * minor whitespace * remove unneeded macro * Committing clang-format changes * Add "option" command for clang options * Rework CMake add_custom to use the BYPRODUCTS argument Update pkgconfig scripts for parallel builds. Fix install COPYING file reference. Remove unused round defines. Change CMake default setting of BUILD_CPP to off. * Fortran target depends * Remove incorrect source attribute * Revert define removal * printf specifiers and VS2015 min changes * Committing clang-format changes * Add time struct Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
* Hdf5 1 10 Update license url (#403)Larry Knox2021-03-011-1/+1
| | | | | | | | | | | | | | | | | | | | | | | * close #195. (#196) * Update HDF5PluginMacros.cmake * Update HDF5PluginMacros.cmake * Modify temporary rpath for testing in java example scripts. (#230) * Fix undefined left shifting of negative numbers (#338) Undefined Bahavior Sanitizer errored here about left shifting negative numbers. * Update license url (#332) * Modify temporary rpath for testing in java example scripts. * Update URL in source file Copyright headers for web copy of COPYING file - src and test directories. Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org> Co-authored-by: Sean McBride <sean@rogue-research.com>
* Source formattedAllen Byrne2020-10-011-163/+168
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* Even more normalization with developDana Robinson2020-08-151-1/+1
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* HDFFV-10903 merge dev changes to 1.10Allen Byrne2019-09-181-1/+1
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* OESS-29 Update HD prefix and compare against developAllen Byrne2019-08-231-101/+101
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* Merge HD prefix and whitespace changes from developAllen Byrne2019-08-181-7/+7
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* Cleanup when merging to other branchesAllen Byrne2019-07-301-171/+175
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* Change copyright headers to replace url referring to file to be removedlrknox2017-04-141-6/+4
| | | | | | | | and replace it with new url for COPYING file. Fix 2 lines in java error test expected output file where messages include line numbers changed by reducing the copyright header by 2 lines.
* [svn-r30201] Description:Quincey Koziol2016-07-181-18/+39
| | | | | | | | | Switch test framework to dynamically allocate the testing array, and expand the length of the description field. Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30189] Description:Quincey Koziol2016-07-181-2/+2
| | | | | | | | | Clean up more warnings: drop the warning count from ~1310 down to ~940, with only 31 types of warnings in 148 files (down from 38 types in 167 files). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r30113] Description:Quincey Koziol2016-06-281-5/+5
| | | | | | | | Clean up warnings (from 2774 -> 1560, with my standard debug build) Tested on: MacOSX/64 10.11.5 (amazon) w/serial, parallel & production (h5committest forthcoming)
* [svn-r27811] Description:Quincey Koziol2015-09-161-10/+13
| | | | | | | | | | | Refactor property list code to "deep copy" properties in the correct way, retraining the rest of the library to copy & release things correctly. This cleans up another batch of memory leaks, etc. within the library. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (h5committest forthcoming)
* [svn-r25465] BUg fix: HDFFV-8881Albert Cheng2014-07-221-9/+14
| | | | | | | | | | | testfrome.c has incorrectly exit code (using -1). Fixed by replacing them with C defined EXIT_FAILURE. Verified by temporary decreaing MAXNUMTESTS to introduce failure in testhdf to see the changed code did work. Also replaced all other correctly coded exit codes with the C defined EXIT_SUCCESS and EXIT_FAILURE. This would help portability for non-Unix systems. Tested: h5committest.
* [svn-r23529] Description:Quincey Koziol2013-04-031-2/+2
| | | | | | | | Stop aliasing property to indicate internal collective metadata operations with property to perform collective raw data operations from the application. Tested on: Mac OSX/64 10.8.3 (amazon) w/paralllel
* [svn-r23332] HDFFV-8322: for valgrind testing, split-up testhdf5 tests by ↵Allen Byrne2013-03-061-2/+2
| | | | | | excluding and running long running tests separately. Tested: local linux
* [svn-r22758] Description:Quincey Koziol2012-09-131-6/+0
| | | | | | | | | | | | | Bring generic improvements from encode/decode property list branch to the trunk. This includes a better version of the property list comparison routine, cleaned up compiler warnings, and some cleaned up property list callbacks. Also, started on changes to clean up parallel test output, so that it doesn't report successful tests from each process. Tested on: Mac OSX/64 10.7.4 (amazon) w/debug, GCC 4.7.x, FORTRAN, C++, threadsafe and parallel Linux 2.6/32 (jam) w/debug Solaris 2.7/64 (linew) w/debug
* [svn-r19796] Bug 2091: remove all Metraowerks compiler code bracheted by ↵Albert Cheng2010-11-161-1/+1
| | | | | | | | __MWERKS__. Metraowerks compiler is no more. Make the code cleaner. Tested: H5committest plus jam serial.
* [svn-r19481] I'm backing out my fix for bug 1707 because there're some ↵Raymond Lu2010-09-271-5/+1
| | | | | | | | | | | unresolved issues - r19441 and 19467. Bug 1707 is that H5Eset_auto causes a seg fault when an application uses -DH5_USE_16_API with the 1.8 library to compile. I created a branch off the trunk called set_auto to continue working on the problem. Tested on jam - backing out, simple.
* [svn-r19457] Bug fix for 1707 - H5Eset_auto causes a seg fault when an ↵Raymond Lu2010-09-211-1/+5
| | | | | | | | | | | | | application uses -DH5_USE_16_API with the 1.8 library to compile. The cause is from the mismatch of H5Eprint1 and H5Eprint2 set through H5Eset_auto. I changed the union in the structure H5E_auto_t. Another change is to make H5Eget_auto fail if H5Eset_auto is called to set the printing function. I'll write a document for it. Tested on heiwa, jam, and amani. The property change in configure.in, config, and Makefile.am came from the merge of the 1.8 library change.
* [svn-r19242] Description:Quincey Koziol2010-08-161-0/+18
| | | | | | | | | Add in override for testing timeout alarm to allow "HDF5_ALARM_SECONDS" environment variable to change the timeout value from the default value. Tested on: Mac OS X/32 10.6.4 (amazon) w/debug & production (Too minor to require h5committest)
* [svn-r19092] Description:Quincey Koziol2010-07-191-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring "shape same" changes from LBL branch to trunk. These changes allow shapes that are the same, but projected into dataspaces with different ranks to be detected correctly, and also contains code to project a dataspace into greater/lesser number of dimensions, so the I/O can proceed in a faster way. These changes also contain several bug fixes and _lots_ of code cleanups to the MPI datatype creation code. Many other misc. code cleanup are included as well... Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in debug mode Mac OS X/32 10.6.3 (amazon) in debug mode Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* [svn-r18154] ID 1753: added macro version of GetTestVerbosity.Albert Cheng2010-01-221-4/+4
| | | | | | | | GetTestVerbosity() is called many times during tests. Implemented a more efficient macro version HDGetTestVerbosity. Tested: Jam (serial and parallel). Did not run h5committest since this is a trival change that is portable, I am 99% sure.
* [svn-r14097] Description:Quincey Koziol2007-08-211-1/+1
| | | | | | | | | | | | | First real use of API versioning code, H5E routines switched to use new API versioning scheme. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r13782] Increase the max number of tests to 45.Christian Chilan2007-05-221-1/+1
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* [svn-r13253] Updated all C and C++ style source code files with the THG ↵Albert Cheng2007-02-071-2/+3
| | | | | | | | | copyright notice. Tested platform: Kagiso only since it is only a comment block change. If it works in one machine, it should work in all, I hope. Still need to check the parallel build on copper.
* [svn-r12440] Purpose:Quincey Koziol2006-06-271-2/+2
| | | | | | | | | | | Code cleanup Description: Trim trailing whitespace in Makefile.am and C/C++ source files to make diffing changes easier. Platforms tested: None necessary, whitespace only change
* [svn-r12430] Purpose:James Laird2006-06-211-17/+36
| | | | | | | | | | | | | | | | testing feature Description: HDF5 Test Express change; now accepts values 0 to 3. Solution: As explained in the RFC and documented in the code, there are now four levels of "express-ness", 0 (no limit) to 3 (1 min limit). It is now up to test writers to take advantage of the various levels to tune their tests' run times. Platforms tested: mir (minor change)
* [svn-r12210] Purpose:Albert Cheng2006-04-071-0/+47
| | | | | | | | | | | | feature Description: Added the GetTestExpress and SetTestExpress to support the TestExpress mode according to $HDF5TextExpress. For now, it is just defined or not, the actual value does not matter. Platforms tested: heping(serial), mir (PP).
* [svn-r11871] Purpose:Albert Cheng2006-01-091-1/+14
| | | | | | | | | | | | | | Bug fix. Description: getenv_all will be called even when it is NOT an MPI application. Solution: Moved the use of getenv_all("HDF5_NOCLEANUP") to fix_name so that it will be invoked only if a parallel driver is used. Platforms tested: hand tested in copper.
* [svn-r11441] Purpose:Albert Cheng2005-09-191-1/+3
| | | | | | | | | | | | Feature. Description: Added ALARM_ON, ALARM_OFF feature to terminate tests that run more than the default time limit. So far, the feature is applied in the standard test frame. Platforms tested: heping PP.
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-4/+4
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r10558] Purpose:MuQun Yang2005-04-061-1/+1
| | | | | | | | | | | | | | Change maximum test number from 30 to 40 since more collective IO tests were added into parallel HDF5 test. Description: Solution: Platforms tested: heping, copper, tungsten, cobalt, SDSC TG. Misc. update:
* [svn-r10236] Purpose: Added a util wrapperBinh-Minh Ribler2005-03-191-0/+9
| | | | | | | | | | Description: Added function IncTestNumErrs to increment the number of errors that is defined in testframe.c Platforms tested: Linux 2.4 (heping) AIX 5.1 (copper)
* [svn-r9183] Purpose: New featureRaymond Lu2004-09-011-5/+1
| | | | | | | | | | | | Description: Restore 6 old error API functions back to the library to be backward compatible with v1.6. They are H5Epush, H5Eprint, H5Ewalk, H5Eclear, H5Eset_auto, H5Eget_auto. These functions do not have error stack as parameter. Solution: Internally, these functions use default error stack. Platforms tested: h5committest and fuss. Misc. update: RELEASE.txt
* [svn-r9139] Purpose:Albert Cheng2004-08-231-1/+5
| | | | | | | | | | | | | | | Bug fix. Description: The return value of TestPrivateParser() was not tested, thus program would keep on going incorrectly even if errors were detected in TestPrivateParser. Solution: Check the return and exit accordingly. Platforms tested: Tested in Eirene and Sol in both serial and pp modes.
* [svn-r9115] Purpose:Albert Cheng2004-08-191-12/+59
| | | | | | | | | | | | | | | | | | | | | | | | | feature Description: Another revamp of the test interface. TestInit: is used to register Test Program name, test program specific Usage and option parsing routines. TestUsage: will invoke extra usage routine if provided. TestParseCmdLine: will invoke extra option parsing routine if provided. GetTestSummary() and GetTestCleanup() replaces the previous Summary and CleanUp arguments of TestParseCmdLine. test/testhdf5, test/ttsafe.c, testpar/t_mpi.c, testpar/testphdf5.c: All have been updated to use the new Test Routines. testpar/t_mpi.c: Also a fix of a compiler optimization bug when pgcc in Linux is used to compile it. Changed buf[] and expected to unsigned char type to avoid a bug that failed to do sign-extension. Platforms tested: "h5committested" Also tested thread-safe option in eirene.
* [svn-r9079] Purpose:Albert Cheng2004-08-131-48/+73
| | | | | | | | | | | | | | Feature Description: Changed TestParseCmdLine to accept an optional extra_parse() function provided by indidivual test application. Extra_parse() can handle extra options special to that test application. Updated testhdf5.c to use the new syntax of TestParseCmdLine(). Platforms tested: On eirene both serial and parallel.
* [svn-r9050] Purpose:Albert Cheng2004-08-081-9/+16
| | | | | | | | | | | | | Feature Description: Added a feature such that if the test name starts with '-', do not run it by default. Platforms tested: Eirene both serial and parallel. Misc. update:
* [svn-r8383] Purpose:Quincey Koziol2004-04-181-1/+1
| | | | | | | | | | | | | Code cleanup Description: Clean up lots of warnings based on those reported from the SGI compilers as well as gcc. Platforms tested: SGI O3900, IRIX64 6.5 (Cheryl's SGI machine) FreeBSD 4.9 (sleipnir) w/ & w/o parallel h5committest
* [svn-r8298] Purpose:Albert Cheng2004-04-031-12/+50
| | | | | | | | | | Code cleanup Description: Added SetTest() to handle test controls. Platforms tested: h5committested.
* [svn-r8292] Purpose:Albert Cheng2004-04-011-0/+12
| | | | | | | | | | | Feature. Description: Added GetTestParameters() to provide Test Parameters to individual test programs. Platforms tested: "h5committested"
* [svn-r8289] Purpose:Albert Cheng2004-03-301-1/+9
| | | | | | | | | | | | | | Feature Description: Added to AddTest() a generic parameters pointer argument to allow some extra parameters for some tests. E.g., test file names can be customized during runtime and passed into the test routines. Platforms tested: "h5committested". Also run compat test in eirene.
* [svn-r8102] Purpose:Albert Cheng2004-01-231-2/+0
| | | | | | | Removed debug print statements committed by mistake. Platforms tested: eirene.
* [svn-r8100] Purpose:Albert Cheng2004-01-231-8/+18
| | | | | | | Added the function ParseTestVerbosity() to be shared by all programs. Platforms tested: Eirene.
* [svn-r8097] Purpose:Albert Cheng2004-01-231-5/+5
| | | | | | | | | | | Bug fix Description: C++ compilers do not like the variable name new which is a kind word for C++. Changed it to newval instead. Platforms tested: Tested in Copper which is the one complained about the name.
* [svn-r8094] Purpose:Albert Cheng2004-01-221-4/+17
| | | | | | | | | | | | | | | | New feature. Description: Added function SetTestVerbosity() so that other applications can set the verbosity explicitedly without the whole testframe taking over. Added Verbose queries shorthands to make code more readable and easier to change the levels of low, medium and high. Platforms tested: Eirene (both serial and parallel). Misc. update:
* [svn-r8084] Purpose:Albert Cheng2004-01-221-5/+5
| | | | | | | | | | | | | | | | | | | Improvement. Description: Verbosity level were specified by numbers which are not meaningful and prone to typos. Solution: Adapted the Verbosity predefined level symbols from HDF4 and changed all numberic verbosity to symbolic values. (Still need to convert some left over macros like MESSAGE.) Platforms tested: Eirene. No h5committest since this is trivial. Misc. update:
* [svn-r8048] Purpose:Quincey Koziol2004-01-101-1/+44
| | | | | | | | | | | | | Code cleanup & reorganization Description: Move further in the testing framework cleanup, eliminating all the global variables (moving them into testframe.c as static variables) from the testing framework code and moving it into the libh5test.a. Platforms tested: FreeBSD 4.9 (sleipnir) w & w/o thread-safety, c++ & parallel h5committested
* [svn-r8022] Purpose:Quincey Koziol2004-01-061-0/+298
Code cleanup Description: Refactor library testing framework (used for the testhdf5 & ttsafe tests) to remove almost all of the duplicated code, moving the common code into a new 'testframe.c' source file. Platforms tested: FreeBSD 4.9 (sleipnir) w & w/o thread-safety h5committest