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* [svn-r13113] Refactoring. Cleaned up code, added a few sanity checks.James Laird2007-01-051-4/+0
| | | | | | Extracted duplicated code into functions. Tested on Windows, juniper, and kagiso. Will test on copper next.
* [svn-r12902] Checkin of Shared Object Header Message work.James Laird2006-11-131-0/+4
| | | | | | | | | | | | This feature is still in progress; Shared Object Header Messages are not complete as a feature and are not thoroughly tested. There are still "TODO" comments in the code (comments with the word "JAMES" in them, so as not to be confused with other TODO comments). Hopefully this checkin will reduce the liklihood of conflicts as I finish implementing this feature. All current tests pass on juniper, copper (parallel), heping, kagiso, and mir.
* [svn-r12803] Description:Quincey Koziol2006-10-231-7/+7
| | | | | | | | | | | | | | Finish new version of the I/O pipeline message, which is much smaller than the previous version. This version is used with the "use the latest version of the format" flag. Closed several memory leaks/overruns (found with valgrind). Also, lots of compiler & formatting cleanups. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12736] Description:Quincey Koziol2006-10-091-2/+0
| | | | | | | | | | | | | | | | | | | Add "use the latest format" support for dataspace object header encode/ decode routines and clean up format a bit for the latest format (new to 1.8.x releases) Remove storing 'perm' parameter for array datatypes in memory and the file, and add test to make certain that if any user applications are attempting to store them, we get some reports back. (Should be unlikely, since the RefMan says that the parameter is not implemented and is unsupported). Carry those changes into the tests, etc. Clean up a bunch more compiler warnings. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/FORTRAN & C++ Linux/64 2.4 (mir) w/enable-1.6-compat
* [svn-r12327] Purpose:James Laird2006-05-031-0/+4
| | | | | | | | | | | | | | Bug fix Description: A datatype wasn't being closed in th5s.c Solution: This minor oversight caused an error with my Object Header code. The datatype is now closed in the test. Platforms tested: windows, mir, copper
* [svn-r11686] Purpose:Quincey Koziol2005-11-071-0/+518
| | | | | | | | | | | | | | | | | | | New feature Description: Add in baseline "object copy" code from Peter [in the form of a new API routine: H5Gcopy()]. There's still some work to do (like handling variable- length datatypes and possibly support for references) and it hasn't been tested on mounted files yet, but the core functionality is there and working correctly. I've also got a set of patches to update the 1.6 branch with tweaks to keep the branches mostly in sync, but Elena will kill me if I import them before the 1.6.5 release is out... :-) Platforms tested: FreeBSD 4.11 (sleipnir) h5committested
* [svn-r11245] Purpose:Quincey Koziol2005-08-131-40/+40
| | | | | | | | | | | | | | | | | | | | Code cleanup Description: Trim trailing whitespace, which is making 'diff'ing the two branches difficult. Solution: Ran this script in each directory: foreach f (*.[ch] *.cpp) sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f end Platforms tested: FreeBSD 4.11 (sleipnir) Too minor to require h5committest
* [svn-r9727] Purpose:Quincey Koziol2004-12-291-5/+5
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
* [svn-r8981] Purpose:Quincey Koziol2004-08-021-0/+1
| | | | | | | | | | | | | Code cleanup Description: Various minor tweaks to clean code up and bring it into closer syncronization with the release branch. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel h5committested IRIX64 6.5 (modi4)
* [svn-r8964] Purpose:Quincey Koziol2004-07-281-0/+6
| | | | | | | | | | | | Revise new feature Description: Add buffer type and version # bytes to the encoded datatype and dataspace buffers (for H5Tencode & H5Sencode) Platforms tested: FreeBSD 4.10 (sleipnir) Too minor to require h5committest
* [svn-r8953] James Laird2004-07-271-3/+91
| | | | | | | | | | | | | | | | Purpose: Bug fix Description: When a simple dataspace is created, its extent should be set before using it, or it will silently function as a NULL dataspace. Solution: Added checks on user-supplied dataspaces. Now dataspaces without extents set will throw errors; users must explicitly set a dataspace to be NULL. Platforms tested: sleipnir, windows
* [svn-r8921] Purpose: new featureRaymond Lu2004-07-211-3/+165
| | | | | | | | | | | | | | Description: This is the second step of checkin for encoding and decoding objects. H5Tencode and H5Tdecode have been committed in the previous step. H5Sencode and H5Sdecode are checked in this time. Solution: Given object ID, these functions encode and decode object information into and from binary buffer and return new object ID. They take advantage of the existing codes of object header message and encode in the same format. Platforms tested: fuss and h5committest. Misc. update: RELEASE.txt
* [svn-r8899] James Laird2004-07-201-0/+12
| | | | | | | | | | | | | | | | Purpose: Bug Fix Description: Calling H5Sset_extent_simple to change a dataspace's maxdims from nonzero to zero causes errors (infinite loops, seg faults, asserts) because the pointer to the maximum size isn't cleaned up properly Solution: Clean up that pointer. Added a test for this case. Platforms tested: sleipnir (very minor change)
* [svn-r8782] Purpose:Quincey Koziol2004-07-011-2/+2
| | | | | | | | | | | Code cleanup Description: Clean up almost all warnings from Windows builds. Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel Too minor to require h5committest
* [svn-r8377] Purpose:Quincey Koziol2004-04-171-4/+106
| | | | | | | | | | | Code cleanup Description: Added more tests Platforms tested: FreeBSD 4.9 (sleipnir) h5committest
* [svn-r8334] Purpose: Bug fixRaymond Lu2004-04-091-5/+5
| | | | | | | | Description: Variable name "class" conflicts with C++ key word. Solution: changed it to "type" Platforms tested: RH 8
* [svn-r8331] Purpose: Last step of check-in for Null dataspaceRaymond Lu2004-04-081-0/+122
| | | | | | | | | | | | Description: Mainly are header message changes for dataspace. In last round of check-in, a new header message for dataspace to created, which is not a good way. Now, there will be no new message for dataspace, but just add the type of dataspace in the message while increment its version number. Backward compatibility is addressed. The attribute design is modified accordingly. Took out Null dataspace test from tmisc.c and put it in th5s.c. Platforms tested: h5committest
* [svn-r8239] Purpose: Brought back changes from 1.6 branch (small bug fix)Elena Pourmal2004-03-081-3/+3
| | | | | | | | | | | | Description: Wrong datatype was used to calculate the size of data buffer Solution: Used correct the datatype Platforms tested: partially h5comittested (sol and verbena); tested manually for sequential version on copper Misc. update:
* [svn-r8048] Purpose:Quincey Koziol2004-01-101-6/+3
| | | | | | | | | | | | | Code cleanup & reorganization Description: Move further in the testing framework cleanup, eliminating all the global variables (moving them into testframe.c as static variables) from the testing framework code and moving it into the libh5test.a. Platforms tested: FreeBSD 4.9 (sleipnir) w & w/o thread-safety, c++ & parallel h5committested
* [svn-r6662] Purpose:Quincey Koziol2003-04-141-2/+2
| | | | | | | | | | | | | | | | Code cleanup Description: Switched some system/library calls to use wrappers. Platforms tested: FreeBSD 4.8 (sleipnir) w/C++ Linux 2.4 (burrwhite) w/FORTRAN Solaris 2.7 (arabica) w/FORTRAN IRIX64 6.5 (modi4) w/parallel & FORTRAN (h5committest not run due to my ongoing difficulties with C++ on burrwhite).
* [svn-r6597] Purpose:Quincey Koziol2003-04-081-3/+1
| | | | | | | | | | | | | | | Code cleanup Description: Corrected a few comments. Solution: Platforms tested: FreeBSD 4.8 (sleipnir) Linux 2.4 (eirene) Misc. update:
* [svn-r6538] Purpose:Bill Wendling2003-03-311-11/+13
| | | | | | | | | | | | | Update Description: Updated the Copyright statement Platforms tested: Linux (This change is only in the comments, so I just check that the modules still compile) Misc. update:
* [svn-r6109] *** empty log message ***Quincey Koziol2002-11-201-5/+5
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* [svn-r5525] Elena Pourmal2002-06-041-0/+5
| | | | | | | | | | | | | | Purpose: Bug fix (#699), fix provided by a user, approved by Quincey Description: When a scalar dataspace was written to the file and then subsequently queried with the H5Sget_simple_extent_type function, type was reported H5S_SIMPLE instead of H5S_SCALAR. Solution: Applied a fix (see bug report 699) and modified out test program to exercise the case. Platforms tested: Solaris 2.7 and Linux 2.2.18
* [svn-r4643] Purpose:Quincey Koziol2001-11-271-2/+2
| | | | | | | | | | | | | | | | | | | | | | Code cleanup Description: Windows is generating hundreds of warnings from some of the practices in the library. Mostly, they are because size_t is 32-bit and hsize_t is 64-bit on Windows and we were carelessly casting the larger values down to the smaller ones without checking for overflow. Also, some other small code cleanups,etc. Solution: Re-worked some algorithms to eliminate the casts and also added more overflow checking for assignments and function parameters which needed casts. Kent did most of the work, I just went over his changes and fit them into the the library code a bit better. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r4509] Purpose:Quincey Koziol2001-10-021-0/+91
| | | | | | | | | | | | | Test bug fix. Description: When reading or writing to chunked datasets and the data needed datatype conversion, and the amount of data was more than one conversion buffer, data in the conversion buffer was getting corrupted. Solution: Corrected error in advancing buffer pointer where it was being advanced by the number of elements instead of the number of bytes. Platforms tested: FreeBSD 4.4 (hawkwind)
* [svn-r3770] Purpose:Bill Wendling2001-04-031-5/+5
| | | | | | | | | | | | | | | | | Update Description: Changed includes of the form: #include <hdf5_file.h> to #include "hdf5_file.h" so that gcc can pick them up easier without including the system header files since we don't care about them. Platforms tested: Linux
* [svn-r3745] Purpose:Quincey Koziol2001-04-011-6/+6
| | | | | | | | | | | Code Tweaks Description: "FILE" macro for file names was getting confused with Standard C __FILE__ macro on certain platforms. Solution: Changed "FILE" macro usage to "DATAFILE" Platforms tested: FreeBSD 4.3 (hawkwind)
* [svn-r3677] Purpose:Albert Cheng2001-03-201-4/+0
| | | | | | | | | | | | | Bug fix (sort of) Description: The RCSID string in H5public.h was causing the C++ code problem as it was included multiple times and C++ did not like multiple definitions of the same static variable. Solution: Since we don't really make use of the RCSID strings as we have not installed it in all source files, we decided to remove it. Platforms tested: eirene (linux), modi4 (IRIX64-64) both serial and parallel modes.
* [svn-r3652] Purpose:Quincey Koziol2001-03-161-38/+38
| | | | | | | | | | | | Code cleanup Description: Binh-Minh found several places where parameters and/or return-values in the tests were not matching the current parameters for functions in the library. Solution: Walked through the code and aligned the parameters and return-values with the current functions. Platforms tested: FreeBSD 4.2 (hawkwind)
* [svn-r3307] Purpose:Quincey Koziol2001-01-191-8/+0
| | | | | | | | | | | Code cleanup Description: File was being opened around several dataspace operations which don't need the file to be open. Solution: Removed file open/close around the dataspace operations. Platforms tested: FreeBSD 4.2 (hawkwind)
* [svn-r2725] Purpose:Albert Cheng2000-10-241-5/+19
| | | | | | | | | | | | | | Bug fix. Description: Could not find the pre-created file for the H5S_MAX_RANK test when --srcdir option is used. testhdf5 was looking for it in the currect directory only. Solution: Make use of the value of the environment variable srcdir that is passed to the tests. Compose the real location of the testfile in order to open it even from a remote build directory. Platforms tested: Modi4, arabica, eirene
* [svn-r2717] Purpose:Quincey Koziol2000-10-201-1/+5
| | | | | | | | | | | | | | | | Change test files for increased maximum dimension constant. Description: space_overflow.c - added some simple error checking. th5s.c - corrected test case for maximem dimensions to use correct file and actually test what is supposed to be tested... :-) th5s.h5 - regenerated with increased dimensions. Platforms Tested: FreeBSD 4.1.1 (hawkwind) Solaris 2.5 (baldric)
* [svn-r2132] Tested H5Screate_simple & H5Sset_extent_simple disallowingQuincey Koziol2000-04-121-0/+14
| | | | size 0 dimensions without corresponding unlimited dimension.
* [svn-r1129] Test bugs fixed in T3E port.Albert Cheng1999-03-091-2/+2
| | | | | | | | | external.c: Test assumed sizeof(int) is 4. Changed the hard-coded values to values depending on the native sizeof(int). th5s.c: Changed hardcoded old filenames to macro FILE.
* [svn-r952] Changes since 19981125Robb Matzke1998-11-251-2/+2
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./doc/html/Datatypes.html ./src/H5.c ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tpublic.h ./src/H5detect.c ./test/chunk.c ./test/dtypes.c ./test/h5test.c ./test/mtime.c ./test/tattr.c ./test/th5s.c ./tools/h5dump.c ./tools/h5dumputil.c ./tools/h5import.c ./tools/h5ls.c ./tools/h5toh4.c ./tools/h5tools.c Renamed the old H5T_NATIVE_CHAR type to H5T_NATIVE_SCHAR to denote that it is always signed. Added a new H5T_NATIVE_CHAR type which has the same range, representation, and behavior as either H5T_NATIVE_SCHAR or H5T_NATIVE_UCHAR depending on the compiler and its command-line switches for the application source file which references H5T_NATIVE_CHAR. If source files are compiled with different switches then each source file will resolve H5T_NATIVE_CHAR appropriately so it matches the C type `char' in that source file. NOTE: THERE ARE OTHER DOCUMENTATION FILES THAT I DIDN'T CHANGE BECAUSE I CAN'T MODIFY THE SOURCE. ./test/extend.c Swapped two lines to prevent diagnostic messages from messing up the formatted output.
* [svn-r795] Changes since 19981026Robb Matzke1998-10-261-3/+28
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./MANIFEST ./test/th5s.h5 [NEW] ./test/th5s.c Added a test to make sure that creating a data space with too large a rank fails. Added a test to make sure that reading a file that has a dataset with a space with too large a rank fails. Actually, this one is a little weird: the code that reads the data space message assumes the space is scalar if the message cannot be read. Fortunately the layout message fails also, preventing the dataset from being opened. However, since the data type message is still visible h5ls will report that the object is a named data type. ./test/space_overflow.c [NEW] This is the little program that makes the th5s.h5 file. ./src/H5A.c ./src/H5R.c ./src/H5Sselect.c Updated trace info. ./src/H5Olayout.c ./src/H5Osdspace.c Added code to fail if the dimensionality is too large when decoding a layout or simple data space message. ./src/H5Oprivate.h Redefined H5O_LAYOUT_NDIMS in terms of H5S_MAX_RANK. ./src/H5P.c ./src/H5S.c Check for ndims>H5S_MAX_RANK in API function calls, added assert to internal functions. ./src/H5V.c Changed a `<' to an `<=' in an assert. ./test/flush2.c Includes stdlib.h for getenv(). ./tools/h5tools.c Able to handle up to H5S_MAX_RANK dimensions during output.
* [svn-r641] Changed function names for beta release.Quincey Koziol1998-09-011-53/+53
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* [svn-r533] Added tests for H5Sextent_class (renamed H5Sget_class)Quincey Koziol1998-07-231-0/+5
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* [svn-r489] Changed more API functions to the new names as documented. Also, ↵Quincey Koziol1998-07-141-33/+33
| | | | | | added stub for testing selections.
* [svn-r459] Changed H5Sget_npoints call to H5Sextent_npoints and ↵Quincey Koziol1998-07-071-18/+18
| | | | H5Sselect_npoints calls.
* [svn-r452] Changed tests to use the new dataspace API calls. Still need to ↵Quincey Koziol1998-07-061-4/+11
| | | | | | add tests for point selections and strides.
* [svn-r445] Added individually named cleanup_xxx routine to each test module fileAlbert Cheng1998-07-031-0/+22
| | | | | | | | to cleanup temporary files used by that particular module. Added a cleanup() routine to testhdf5 that calls all the other cleanup_xxx() routines to do cleanup. Cleanup action can be disabled either by -c (no cleanup) option or HDF5_NOCLEANUP environment variable.
* [svn-r432] Changes since 19980617Robb Matzke1998-06-181-30/+37
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./html/Datatypes.html ./src/H5T.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5Tpublic.h ./src/H5detect.c ./test/cmpd_dset.c ./test/dsets.c ./test/dtypes.c ./test/external.c ./test/tattr.c ./test/th5s.c Organized the predefined data types. ./html/H5.intro.html NO MODIFICATIONS! This file is a mess (obviously generated from something else) so I skipped updating it! ./src/h5ls.c ./test/dsets.c ./test/tattr.c ./test/th5s.c Added extra argument to H5Sget_dims() calls per Albert's last update.
* [svn-r380] Finished tests for scalar dataspaces with both datasets and ↵Quincey Koziol1998-04-281-9/+299
| | | | attributes.
* [svn-r338] Changes since 19980407Robb Matzke1998-04-081-32/+32
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ---------------------- ./src/H5B.c ./src/H5D.c ./src/H5Dprivate.h ./src/H5Dpublic.h ./src/H5F.c ./src/H5Farray.c ./src/H5Fcore.c ./src/H5Ffamily.c ./src/H5Fistore.c ./src/H5Flow.c ./src/H5Fprivate.h ./src/H5Fpublic.h ./src/H5Fsec2.c ./src/H5Fsplit.c ./src/H5Fstdio.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5HG.c ./src/H5HL.c ./src/H5MF.c ./src/H5MFprivate.h ./src/H5O.c ./src/H5Ocont.c ./src/H5Odtype.c ./src/H5Oefl.c ./src/H5Olayout.c ./src/H5Oname.c ./src/H5Oprivate.h ./src/H5Osdspace.c ./src/H5Oshared.c ./src/H5Ostab.c ./src/H5P.c ./src/H5Ppublic.h ./src/H5S.c ./src/H5Sprivate.h ./src/H5Spublic.h ./src/H5Ssimp.c ./src/H5Tconv.c ./src/H5Tpkg.h ./src/H5V.c ./src/H5Vprivate.h ./src/H5private.h ./src/H5public.h ./src/h5ls.c ./test/cmpd_dset.c ./test/dsets.c ./test/extend.c ./test/external.c ./test/hyperslab.c ./test/iopipe.c ./test/istore.c ./test/shtype.c ./test/tfile.c ./test/th5s.c Anything having to do with the size of a dataset now uses the types `hsize_t' and `hssize_t' which must be the same size and at least as large as `size_t'. This isn't fully tested yet, so hsize_t and hssize_t are defined as size_t and ssize_t in H5public.h. Setting them to larger values will trip up gcc versions less than 2.8.1 on x86 platforms. Documented unused function formals with `__unused__' before the formal name. This also has the effect of supressing warning messages for gcc since it's defined to be `__attribute__((unused))' in the H5private.h file. ./src/debug.c ./src/h5ls.c If the file name contains a `%' then the file is opened as a file family with H5P_DEFAULT for the file member access property list. ./src/h5ls.c The group name is optional, defaulting to `/'. ./src/hdf5.h Added some missing public header files.
* [svn-r319] Removed H5M API from codeQuincey Koziol1998-03-121-5/+5
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* [svn-r297] Switched templates to "property lists" and changed API prefix ↵Quincey Koziol1998-02-251-1/+1
| | | | from H5C to H5P
* [svn-r296] Switched prefix for dataspaces from H5P to H5SQuincey Koziol1998-02-251-0/+129
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