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* Revert "Merge pull request #1116 in HDFFV/hdf5 from ↵hdftest2018-06-241-132/+46
| | | | | | | ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" This reverts commit e9f476dad47ce593f13dacb77b1cc664d1f24e7b, reversing changes made to 2ff00b1b937ebe36ac6ddf590c16a4c27fc0b053.
* Merge branch 'develop' into hdf5_1_10.syncM. Scot Breitenfeld2018-06-041-1/+1
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| * Changes made based on feedback from pull request #1039.Vailin Choi2018-05-141-1/+1
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| * Fix for HDFFV-10180 Performance issues with H5Oget_info.Vailin Choi2018-04-241-1/+1
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| * More includes cleanupAllen Byrne2018-02-141-90/+88
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| * Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to ↵Larry Knox2017-04-251-6/+4
| | | | | | | | | | | | | | | | | | | | hdf5_1_10 * commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* | Needs to sync with lib version and Sencode.M. Scot Breitenfeld2018-03-071-92/+83
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* | HDFFV-10384 and includes cleanup merged from devlopAllen Byrne2018-02-161-2/+0
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* | Fix for HDFFV-9947 H5SencodeVailin Choi2017-11-281-70/+165
| | | | | | | | Modifications to fix H5Sencode bug when num points selected is > 2^32.
* | Change copyright headers to replace url referring to file to be removedlrknox2017-04-141-6/+4
|/ | | | | | | | and replace it with new url for COPYING file. Fix 2 lines in java error test expected output file where messages include line numbers changed by reducing the copyright header by 2 lines.
* [svn-r30285] Description:Quincey Koziol2016-08-131-13/+15
| | | | | | | | | More warning cleanups, bringing the build down to 25 unique types of warnings, with 550 warnings in 122 files (down from 28, 770, and 134). Tested on: MacOSX/64 10.11.5 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r27593] Merge revisions 27453 through 27592 from trunk to vds branch.Neil Fortner2015-08-271-3/+3
|\ | | | | | | Tested: ummon
| * [svn-r27460] Minor code cleanup in test/trefer.cDana Robinson2015-08-041-3/+3
| | | | | | | | | | | | | | | | - Fixed an out-of-range char assignment. - Added a couple of malloc() casts. Tested on: jam (minor change, tests only)
* | [svn-r27546] Add tests for H5O__dset_bh_info (H5Oget_info) and unlimited ↵Neil Fortner2015-08-211-0/+45
|/ | | | | | | | selections in a region reference. Tested: ummon
* [svn-r27133] - Add a new attribute function characterstic for format:Mohamad Chaarawi2015-06-011-1/+1
| | | | | | | | * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r26389] Revision 26387 failed with configure option ↵Larry Knox2015-03-081-1/+1
| | | | | | | | --with-default-api-version=v16. Changed H5Dcreate() to H5Dcreate2 in test/trefer.c line 633. Tested with h5committest and with --with-default-api-version=v16 on platypus.
* [svn-r26373] Fix for HDFFV-7959:Scot Breitenfeld2015-03-051-0/+75
| | | | | | H5Rdereference should check for default (HADDR_UNDEF) value and not continue processing and return so that ret value can be checked and handled properly Tested: jam (gnu)
* [svn-r25531] remove use of C99 PRI that failed on windows in dtypes.cMohamad Chaarawi2014-08-111-6/+7
| | | | fix bugs where hid_t were assumed to be 32 bit ints or herr_t.
* [svn-r25496] Description:Quincey Koziol2014-07-301-22/+22
| | | | | | | | | Merge 64-bit ID changes from branch to trunk. (Plus a few minor cleanups that aren't on the branch) Tested on: Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN (h5committested on branch already for a week)
* [svn-r24681] Description:Scot Breitenfeld2014-02-041-2/+2
| | | | | | | | | Fix for HDF5/HDFFV-8620 H5Rget_name with NULL name parameter fails. The name parameter now excepts NULL, in which case the length of then name is returned. Tested: jam (intel and gnu)
* [svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree.Dana Robinson2013-10-311-20/+20
| | | | | | | | | | | | | Prep work for adding a memory free function, part of HDFFV-8551. Tested on: 32-bit LE linux (jam) * with C++, Fortran * with thread safety on These are minor changes (almost entirely renaming foo functions to HDfoo) that don't change functionality. This should not require a full commit test.
* [svn-r24020] Description:Quincey Koziol2013-08-171-1/+1
| | | | | | | | Clean up compiler warnings Tested on: Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN (too minor to require h5committest)
* [svn-r22750] Removed check-in r22746 because it causes an error in objcopy ↵Scot Breitenfeld2012-09-101-5/+0
| | | | | | on Linew 64 byte. Will check-in again after the issue is resolved.
* [svn-r22746] Description:Scot Breitenfeld2012-09-091-0/+5
| | | | | | | | Fix for HDFFV-7959 H5Rdereference should check for default (HADDR_UNDEF) value and not continue processing and return so that ret value can be checked and handled properly. Added fix and test, reviewed: Tested: jam (gnu, intel)
* [svn-r21124] Issue 2763 - adding OAPL_ID as a new parameter to ↵Raymond Lu2011-07-191-0/+2
| | | | | | | | | H5Rdereference. A followup commit for r21117. I made 2 changes: 1. Quincey changed H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for the tests that call H5Rdereference. Inside H5R_dereference, I assigned H5P_DATASET_ACCESS_DEFAULT to OAPL_ID if it is H5P_DEFAULT. 2. I added the test for invalid OAPL_ID in trefer.c. Tested on jam, koala, heiwa.
* [svn-r21121] Description:Quincey Koziol2011-07-181-17/+17
| | | | | | | | | Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to H5Rdereference2(). Tested on: Mac OS X/32 10.6.8 (amazon) w/debug (too minor to require h5committest)
* [svn-r21117] Issue 2763 - I added a new parameter of object access property ↵Raymond Lu2011-07-181-27/+101
| | | | | | list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c. Tested on jam, heiwa, and koala.
* [svn-r19237] Description:Quincey Koziol2010-08-121-26/+22
| | | | | | | | | | Clean up misc. compiler warnings. Tested on: FreeBSD/32 6.3 (duty) in debug mode Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
* [svn-r18666] Description:Quincey Koziol2010-04-291-7/+7
| | | | | | | Switch H5Rget_obj_type to H5Rget_obj_type2. Tested on: Linux/64 2.4 (amani) w/PGI compiler
* [svn-r18654] Bug 1741:Allen Byrne2010-04-281-0/+173
| | | | | | | Added test of H5R package API parameters to testhdf5 test, these test only the public API parameter checks. Tested: local linux
* [svn-r18031] Description:Quincey Koziol2009-12-171-3/+0
|\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Bring r18030 from merge_metadata_journaling branch to trunk: Bring "brush clearing" changes (whitespace & style issues, mostly) from metadata_journaling branch to the "merging" branch, to converge the trunk and the metadata_journaling branch. Also, some other minor cleanups along the way. Tested on: FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers, w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in debug mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode Mac OS X/32 10.6.2 (amazon) in debug mode Mac OS X/32 10.6.2 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode
* | [svn-r15800] Description:Quincey Koziol2008-10-071-3/+3
|/ | | | | | | | | | | | | | | | | | | | | | | Bring file free space branch changes through r15795 into trunk, which includes a fair bit of code cleanup & rearrangement along with a couple of bug fixes also. Tested on: Mac OS X/32 10.5.5 (amazon) in debug mode Mac OS X/32 10.5.5 (amazon) w/C++ & FORTRAN, w/threadsafe, in production mode FreeBSD/32 6.3 (duty) in debug mode FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/Intel compilers w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
* [svn-r14420] Description:Quincey Koziol2008-01-151-3/+3
| | | | | | | | Correct the prototype for H5Sselect_elements() to take an 'hsize_t *' for the coordinates, instead of 'hsize_t **'. Tested on: Mac OS X/32 10.5.1 (amazon)
* [svn-r14229] Description:Quincey Koziol2007-11-011-2/+2
| | | | | | | | | | | | | | | | | | | Change H5O[gs]et_comment to H5O[gs]et_comment_by_name and re-add simpler forms of H5O[gs]et_comment. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
* [svn-r14224] Description:Quincey Koziol2007-10-301-1/+1
| | | | | | | | | | | | | | | | | | | Change H5Literate -> H5Literate_by_name and add simpler form of H5Literate, to bring this routine into alignment with the other new API routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14223] Description:Quincey Koziol2007-10-301-1/+1
| | | | | | | | | | | | | | | | | | Change existing H5Gget_info -> H5Gget_info_by_name and add new version of H5Gget_info, with simpler parameters, to better match new API routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14199] Description:Quincey Koziol2007-10-111-29/+29
| | | | | | | | | | | | | | | | | | | | | Add H5Dcreate to API versioned routines, replacing internal usage with H5Dcreate2 Fix thread-safe error stack initialization for API versioned error stack printing routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14193] Description:Quincey Koziol2007-10-081-14/+14
| | | | | | | | | | | | | | | | | | | Make H5Dopen versioned and change all internal usage to use H5Dopen2 Add simple regression test for H5Dopen1 Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14156] Description:Quincey Koziol2007-09-261-4/+4
| | | | | | | | | | | | | | | | Add API versioning to H5Tcommit() Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14153] Description:Quincey Koziol2007-09-251-0/+258
| | | | | | | | | | | | | Add regression test for H5Rget_obj_type1() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 2.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14148] Description:Quincey Koziol2007-09-141-177/+193
| | | | | | | | | | | | | | | | Add H5Rget_obj_type() to the API versioning and switch internal routines to use H5Rget_obj_type2() Misc. other code cleanups, etc. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14146] Description:Quincey Koziol2007-09-131-4/+5
| | | | | | | | | | | | | | Move H5Gget_objtype_by_idx() to deprecated symbols section, replacing with H5Oget_info_by_idx() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14145] Description:Quincey Koziol2007-09-131-3/+3
| | | | | | | | | | | | | | Move H5Gget_objname_by_idx() to deprecated symbols section. Replace internal usage with H5Lget_name_by_idx(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14136] Description:Quincey Koziol2007-09-061-6/+4
| | | | | | | | | | | | | | Move H5Gget_num_objs() and several minor macros, etc. to deprecated symbols section, replacing it with H5Gget_info(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14131] Description:Quincey Koziol2007-08-301-3/+4
| | | | | | | | | | | | | | Move H5Giterate() and H5G_iterate_t to deprecated symbols section, replacing them with H5Literate and H5L_iterate_t respectively. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14129] Description:Quincey Koziol2007-08-301-4/+4
| | | | | | | | | | | | | | | | Add H5O{set|get}_comment routines, which were overlooked before. Move H5G{set|get}_comment routines to deprecated code section, replacing internal calls with H5O{set|get}_comment. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14126] Description:Quincey Koziol2007-08-291-6/+6
| | | | | | | | | | | | | Move H5Gunlink to deprecated symbol section, replacing internal calls with H5Ldelete. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14104] Description:Quincey Koziol2007-08-231-8/+8
| | | | | | | | | | | | | Pursue calls to H5Gcreate() relentlessly and ruthlessly exterminate them, leaving only a few tame specimens in text files and comments. ;-) Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r13535] Included test of reference with value 100 that was skipped ↵Christian Chilan2007-03-221-3/+0
| | | | previously.
* [svn-r13515] Problem:Albert Cheng2007-03-151-10/+3
| | | | | | | | reference test object reference failed if faked address is 100. Skipped this test for now. Also removed the incorrected added COMPAT_1.4 parts. Tested in kagiso.
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