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* Merge pull request #2739 in HDFFV/hdf5 from namespace_cleanup_01 to developQuincey Koziol2020-08-1415-309/+44
|\ | | | | | | | | | | | | | | * commit '3f46a380e084d83a84783383bdfbbd9a443e9f27': Correct typos w/HGOTO_DONE & HGOTO_ERROR Move H5T_vlen_reclaim to package scope Switch H5VM inline routines back to single underscope and put a comment in their header about this naming Clean up private / package / static namespace issues (function naming, which header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
| * Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-122-6/+6
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| * \ Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-101-6/+6
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| * \ \ Merge remote-tracking branch 'origin/develop' into namespace_cleanup_01Quincey Koziol2020-08-0766-134/+251
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| * | | | Switch H5VM inline routines back to single underscope and put a comment in ↵Quincey Koziol2020-08-063-13/+13
| | | | | | | | | | | | | | | | | | | | their header about this naming
| * | | | Clean up private / package / static namespace issues (function naming, whichQuincey Koziol2020-08-0616-322/+57
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | header file, FUNC_ENTER / LEAVE, etc). Removed remaining personal email addresses from library source code (still needs cleaned from other directories). Misc. warning, style, and whitespace cleanup.
* | | | | Tweak to hide unused threadsafe callback in non-threadsafe buildsDana Robinson2020-08-131-2/+2
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* | | | | Cleans warnings and cruft from ttsafe_attr_vlen.cDana Robinson2020-08-121-11/+9
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* | | | | Fixes Windows issues due to exposed pthread codeDana Robinson2020-08-121-4/+7
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* | | | | Fixes a size mismatch when copying old-style to new-style referencesDana Robinson2020-08-121-4/+4
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* | | | | Fixes memory leads in trefer.cDana Robinson2020-08-121-20/+22
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* | | | Merge pull request #2752 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-08-122-6/+6
|\ \ \ \ | |_|_|/ |/| | | | | | | | | | | | | | | | | | | to develop * commit '78c6be05a84f854074a4df2e10c15a56444e4015': Fixes the splitter VFD test on Windows.
| * | | Fixes the splitter VFD test on Windows.Dana Robinson2020-08-122-6/+6
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* | | Fixes flock Windows failureDana Robinson2020-08-071-6/+6
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* | Removes staff email addresses from the repositoryDana Robinson2020-08-0765-70/+66
| | | | | | | | Removes redundant C library headers from hl library
* | Merge pull request #2730 in HDFFV/hdf5 from ↵Dana Robinson2020-08-063-64/+185
|\ \ | |/ |/| | | | | | | | | | | | | | | | | ~DEROBINS/hdf5_der:file_locking_squash_2 to develop * commit '47ad0ac7237b464e939fe54dd129a151944d9706': Renames BEST-EFFORT to BEST_EFFORT for file locking env var Updated the file locking Fortran property list wrappers and added a test. Fixed missing parens in VFDs Minor change to header comments in file locking C++ changes. Squash merge of file locking fixes
| * Merge branch 'develop' into file_locking_squash_2Dana Robinson2020-08-064-14/+18
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| * | Squash merge of file locking fixesDana Robinson2020-08-033-64/+185
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* | | Merge pull request #2715 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:fix_vlen_ref to ↵Jerome Soumagne2020-08-061-0/+303
|\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | develop * commit 'ef6db167a86e6c065d46963dbd75cd325fe83813': H5R: fix encoding of references that are part of compound types
| * | | H5R: fix encoding of references that are part of compound typesJerome Soumagne2020-07-281-0/+303
| | | | | | | | | | | | | | | | Add corresponding test and some debug information
* | | | Fixes warnings in the splitter VFD and testsDana Robinson2020-08-061-109/+148
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* | | Warning fixes in tools and h5test.cDana Robinson2020-08-061-8/+15
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* | | Minor normalizations with 1.12 branchDana Robinson2020-08-013-6/+3
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* | Minor normalizations with hdf5_1_10Dana Robinson2020-07-319-414/+331
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* Fixed additional typos in tselect.c comments.Dana Robinson2020-07-281-2/+2
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* Fixes typo in tselect.cDana Robinson2020-07-281-1/+1
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* Updates H5Sset_extent_none() to set H5S_NULLDana Robinson2020-07-281-2/+78
| | | | | | | | The API call used to set the internal H5S_NO_CLASS value which produced errors when such a dataspace was passed to many other API calls. Fixes HDFFV-11027
* Merge pull request #2693 in HDFFV/hdf5 from ↵Vailin Choi2020-07-175-1/+181
|\ | | | | | | | | | | | | | | ~VCHOI/my_third_fork:bugfix/HDFFV-11080-heap-use-after-free-by-the-call to develop * commit '3023b34272cc6ada84aebfa7441a6a55afa3621c': Update MANIFEST. Add new test to Cmake. Fix for jira issue HDFFV-11080: (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
| * Update MANIFEST.vchoi2020-07-161-0/+1
| | | | | | | | Add new test to Cmake.
| * Fix for jira issue HDFFV-11080:vchoi2020-07-144-1/+180
| | | | | | | | | | (1) Patch up the file pointer when reading attribute of variable length datatype (2) Test to verify the fix when doing multiple threads
* | H5R: fix type conversion of references within vlen typeJerome Soumagne2020-07-161-0/+270
|/ | | | Update trefer.c with vlen test case
* Add new source files to CMake buildQuincey Koziol2020-06-281-0/+1
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* Clean up warningsQuincey Koziol2020-06-281-21/+20
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* Merge remote-tracking branch 'origin/develop' into monotonic_timerQuincey Koziol2020-06-273-54/+134
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| * * Fix intermittent error with Splitter VFD.Jacob Smith2020-06-253-54/+134
| | | | | | | | | | | | | | | | Mismatch in time of test file creation was creating false negatives. Add file-duplication routine: `h5_duplicate_file_by_bytes()`. * Change library calls in `h5test.c:h5_compare_file_bytes()` to their HD-prefixed equivalents.
* | Merge remote-tracking branch 'origin/develop' into monotonic_timerQuincey Koziol2020-06-26226-49539/+88368
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| * Merge pull request #2615 in HDFFV/hdf5 from ↵Jake Smith2020-06-151-1/+2
| |\ | | | | | | | | | | | | | | | | | | ~JAKE.SMITH/hdf5:bugfix/splitter_valgrind_patch to develop * commit '6462c67b6578e48c1ef6d847be59c0b5e3598a50': Patch a few holes in the Splitter VFD implementation.
| | * Patch a few holes in the Splitter VFD implementation.Jacob Smith2020-05-291-1/+2
| | | | | | | | | | | | | | | * Missing logfile close on driver-open failure. * Initialize empty string in test/vfd (logfile path in W/O compat check).
| * | Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)Larry Knox2020-06-071-7/+7
| |\ \ | | | | | | | | | | | | | | | | | | | | | | | | * commit 'aa338c3a87a4544ccb164832422e3e2462a57b88': Detect when there's the same-shaped selection of a single block of elements on both selections, but with different selection types (i.e. one selection defined as an 'all' type and the other as a hyperslab or point type), without falling into the generic selection iteration case. Normalization of H5T.c with 1.10. Normalization of H5D.c with 1.10.
| | * | Detect when there's the same-shaped selection of a single block of elements onQuincey Koziol2020-06-051-7/+7
| | | | | | | | | | | | | | | | | | | | | | | | both selections, but with different selection types (i.e. one selection defined as an 'all' type and the other as a hyperslab or point type), without falling into the generic selection iteration case.
| * | | Add flags from config/clang-warnings/*general files to H5 C and CXX flags ↵Larry Knox2020-06-061-3/+3
| |/ / | | | | | | | | | | | | | | | | | | for all versions of Clang and Clang++ compilers. Switched from cut to awk in testcheck_version.sh.in to avoid dependence on tab vs. " " in version definitions in H5public.h.
| * | Normalizations with 1.10 branch.Dana Robinson2020-06-021-4/+4
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| * Minor tweaks to testhdf5 code after normalization with 1.10.Dana Robinson2020-05-282-45/+45
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| * Misc warning fixes.Dana Robinson2020-05-104-18/+39
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| * Align contents of CMake and autotools testfile cleanup lists.Quincey Koziol2020-05-032-90/+49
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| * Avoid allocating a chunk index for datasets with 0-sized dimensions, untilQuincey Koziol2020-05-012-20/+214
| | | | | | | | the dataset is extended.
| * Merge pull request #2541 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor ↵Dana Robinson2020-04-271-0/+59
| |\ | | | | | | | | | | | | | | | | | | | | | | | | to develop * commit 'c03ee563f46013d22f36a1895664a9ba876558e9': Further updates to the tools warnings fixes from code review. Updates to tools warning PR from code review. Fixes for warnings in the tools code.
| | * Updates to tools warning PR from code review.Dana Robinson2020-04-261-4/+4
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| | * Fixes for warnings in the tools code.Dana Robinson2020-04-251-0/+59
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| * | For compatibility with non-C99 Visual Studio versions, use "%" PRIuMAXDavid Young2020-04-241-2/+2
| | | | | | | | | | | | instead of "%ju".
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