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* [svn-r28972] Removed option to clear file buffers from autotools, CMake, and ↵Dana Robinson2016-01-261-2/+0
| | | | | | | | | | | | library. Buffers that will be written to disk will now always be cleared since not doing this has huge security implications. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0, x86_64) gcc 5.2.1 serial autotools parallel autotools (MPICH 3.1.4) serial CMake
* [svn-r28950] - remove META_FLUSH_COLLECTIVELY property for delayed sanity ↵Mohamad Chaarawi2016-01-211-7/+7
| | | | | | | | | | checks from metadata dxpls - remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead. - remove flush_me_collectively flag from cache entries - add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit. tested on BB-8 with serial and parallel.
* [svn-r28861] Minor warning format string fix (HDFFV-9640).Dana Robinson2016-01-121-2/+2
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools parallel only (MPICH 3.1.4)
* [svn-r28843] Description:Quincey Koziol2016-01-081-1/+1
| | | | | | | | Bump number of records for random update test again. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28837] Merged r28836 from revise_chunks (tarray.c fix).Dana Robinson2016-01-071-4/+4
| | | | Tested on ostrich w/ gcc
* [svn-r28828] Description:Quincey Koziol2016-01-061-2/+2
| | | | | | | | | | Switch filter plugin to use H5allocate_memory and H5free_memory instead of malloc and free. Tested on: Linux/32 2.6.x (jam) w/serial Linux/64 2.6.x (jam) w/serial MacOSX/64 10.11.2 (amazon) w/serial & parallel
* [svn-r28821] Merge of r28816 from revise_chunks (tarray.c cleanup).Dana Robinson2016-01-061-84/+84
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28792] Added cleanup for new test files to tfile.c.Dana Robinson2016-01-041-0/+2
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28765] Description:Quincey Koziol2016-01-021-1/+1
| | | | | | | | | Bump the nunmber of v2 B-tree records for the random 4-level B-tree update test by another 25,000 records. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (Too minor to require h5committest)
* [svn-r28761] Description:Quincey Koziol2016-01-018-63/+288
| | | | | | | | | | | | Clean up many mismatches between malloc/free and H5MM_malloc/H5MM_xfree in the library and tests (and use of H5free_memory and H5Dvlen_reclaim). Also make H5Ocopy use a private version of H5Lexists, which doesn't internally throw (and suppress) errors when an object (or the path to it) isn't found in the destination. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28759] Description:Quincey Koziol2015-12-311-1/+1
| | | | | | | | Bump number of records for level 4 update test, to cut down on number of random failures. Tested on: None - trivial
* [svn-r28748] Description:Quincey Koziol2015-12-301-1/+1
| | | | | | | | | Bump number of records for level 4 B-tree test, so that it's more likely to always get to level 4. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28742] Description:Quincey Koziol2015-12-291-187/+2439
| | | | | | | | | Add 'update' operation to v2 B-trees, which will insert a new record, or modify an existing one, depending on if the record exists or not. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest forthcoming)
* [svn-r28710] Description:Quincey Koziol2015-12-195-105/+518
| | | | | | | | | | | | Bring r28708 from revise_chunks branch: Fix earray, farray and btree2 use of incorrect file pointer when two files are opened and used to access the data structure. Misc. minor code cleanups as well. Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel h5committest forthcoming
* [svn-r28696] Minor normalization with revise_chunks.Dana Robinson2015-12-174-94/+97
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28678] Updated the cache_tagging test to correctly output tags inDana Robinson2015-12-161-62/+62
| | | | | | | the debug/verbose function. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28606] Description:Quincey Koziol2015-12-131-0/+3
| | | | | | | | | | Revisions to normalize revise chunks vs. trunk, plus push dataset metadata changes into the cache immediately (instead of holding them within the dataset data structures). Tested on: MacOSX/64 10.11.2 (amazon) w/serial & parallel (h5committest not required on this branch)
* [svn-r28577] Normalize test/th5o.c with revise_chunks.Dana Robinson2015-12-111-0/+1
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28575] Normalize test/file_image.c with revise_chunks.Dana Robinson2015-12-111-29/+68
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28573] Merge of r28109 from revise_chunks. Minor change to test/vds.c.Dana Robinson2015-12-111-3/+3
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28570] Normalization of test/lheap.c with revise_chunks.Dana Robinson2015-12-111-49/+52
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28568] Normalization of test/big.c with revise_chunks.Dana Robinson2015-12-111-8/+8
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial only
* [svn-r28467] Removed commented-out tests from the list of simple tests. They ↵Dana Robinson2015-11-301-8/+0
| | | | | | are handled in the additional tests section, below the list. Tested on 64-bit Windows 10 w/ VS2015 and CMake 3.3.1.
* [svn-r28138] Add first support for _Bool and make hbool_t a "real" _Bool if ↵Jerome Soumagne2015-10-2018-145/+75
| | | | | | | | | | | | | | available Fix tests accordingly and fix misuse of hbool_t in various places Fix initialization of H5Pgcpl/ocpl structs in property decoding routines Tested on: Linux/32 (jam) Linux/64 (platypus) Linux/PPC64 (ostrich) MacOSX/64 10.11
* [svn-r27946] Brought VDS branch in sync with trunk (up to r27945).Dana Robinson2015-10-041-0/+2
|\ | | | | | | | | | | | | | | Tested on Ubuntu 15.04 (Linux 3.19 x86_64), gcc 4.9.2, MPICH 3.1.4 and CMake 3.3.2. - Autotools serial w/ Fortran, C++ - Autotools parallel w/ Fortran - CMake serial w/ Fortran, C++
| * [svn-r27932] Increase timeout for istore test when running under vfd.Allen Byrne2015-10-021-0/+2
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* | [svn-r27918] Brought in sync with the trunk:Dana Robinson2015-09-302-1/+7
|\ \ | |/ | | | | | | | | | | | | | | | | r27860-27883 r27892-27916 Tested on: - h5committest - jam (parallel) fails with an existing, unrelated MPI config error - platypus fails with due to an existing, unrelated cmakehdf5 error where it does not recognize --enable-fortran2003.
| * [svn-r27909] Exclude CYGWINAllen Byrne2015-09-291-2/+6
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| * [svn-r27908] Give cache tests extra time for VFD testsAllen Byrne2015-09-291-0/+2
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| * [svn-r27896] Synch VFD types with autotoolsAllen Byrne2015-09-281-0/+1
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| * [svn-r27892] Removed redefinition of H5C__HASH_FCN in test/cache_common.h.Dana Robinson2015-09-271-1/+0
| | | | | | | | | | | | This was causing failures on Ada. Tested on: Ubuntu 15.04 (Linux 3.19.0) w/ gcc 4.9.3
| * [svn-r27851] Description:Quincey Koziol2015-09-224-65/+57
| | | | | | | | | | | | | | | | | | Normalization changes that wouldn't otherwise be necessary if the VDS branch wasn't coming in shortly. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest forthcoming)
* | [svn-r27848] Description:Quincey Koziol2015-09-221-2/+2
| | | | | | | | | | | | | | | | Clean up warnings and some normalization against trunk. Tested: McaOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
* | [svn-r27839] Removed generated autotools stragglers missed in trunk sync.Dana Robinson2015-09-211-2750/+0
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* | [svn-r27835] Description:Quincey Koziol2015-09-21154-730/+1270
|\ \ | |/ | | | | | | | | | | | | Sync w/trunk. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel (h5committest not required on this branch)
| * [svn-r27834] Description:Quincey Koziol2015-09-211-1/+5
| | | | | | | | | | | | | | | | Close FAPL for external link test, to fix infinite loop closing the library. Tested on: MacOSX/64 10.10.5 (amazon) w/serial (too minor to require h5committest)
| * [svn-r27818] Minor warning fixes.Dana Robinson2015-09-172-42/+42
| | | | | | | | Tested on: h5committest
| * [svn-r27811] Description:Quincey Koziol2015-09-165-43/+35
| | | | | | | | | | | | | | | | | | | | | | Refactor property list code to "deep copy" properties in the correct way, retraining the rest of the library to copy & release things correctly. This cleans up another batch of memory leaks, etc. within the library. Tested on: MacOSX/64 10.10.5 (amazon) w/serial & parallel Linux/32 2.6.x (jam) w/serial & parallel (h5committest forthcoming)
| * [svn-r27810] Description:Quincey Koziol2015-09-161-6/+39
| | | | | | | | | | | | | | Clean up resources on failure Tested on: Linux/32 2.6.x (jam) w/Purify
| * [svn-r27808] Update CMake files to use updated test files.Allen Byrne2015-09-162-29/+65
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| * [svn-r27807] Description:Quincey Koziol2015-09-161-0/+2
| | | | | | | | | | | | | | Close memory leak on failure. Tested on: Linux/32 2.6.x (jam) w/purify
| * [svn-r27806] Fix property list serialization for values encoded by ↵Neil Fortner2015-09-16102-179/+299
| | | | | | | | | | | | | | | | | | | | H5Pset_chunk_cache to be compatible between 32 and 64 bit systems. Expand cross platform property list encode/decode testing. Fix warning in H5P__fill_value_enc. Tested: jam, koala, ostrich (h5committest), ummon
| * [svn-r27800] Minor warning fixes in the library tests.Dana Robinson2015-09-168-59/+71
| | | | | | | | Tested on: jam (too minor for h5committest)
| * [svn-r27794] Reintegration merge of features/autotools_rework branch with trunkDana Robinson2015-09-151-2720/+0
| |\ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | NOTES: - Developers will have to run autogen.sh before building with the autotools. - autogen.sh takes the -p option to mimic the old bin/reconfigure behavior. - The generated error, overflow and version headers have been left in place. - The generated H5LT parser code has also been left in place. - There are no changes for CMake users at this time. Tested on: h5committest
| | * [svn-r27748] Correct name of targetAllen Byrne2015-09-101-1/+1
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| | * [svn-r27745] Merge trunk revision 27744Allen Byrne2015-09-101-0/+2
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| | * [svn-r27638] Merged r27500-27631 from trunk.Dana Robinson2015-09-0132-396/+312
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| | * \ [svn-r27507] Merge of r27237-27500 from the trunk.Dana Robinson2015-08-1425-4643/+8497
| | |\ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested w/ h5committest NOTES: - The manifest may still be messed up. - Cmake fails since the dual binary work needs to be merged with this repo's CMake externals.
| | * \ \ [svn-r27222] Merge of r27035-27221 from the trunk.Dana Robinson2015-06-1743-2086/+1141
| | |\ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Tested on 64-bit linux VM: Serial: C++ and Fortran 2003 Parallel: Fortran
| | * \ \ \ [svn-r27038] Merge of r26393-27031 from the trunk.Dana Robinson2015-05-0719-89/+181
| | |\ \ \ \ | | | | | | | | | | | | | | | | | | | | | Tested on 64-bit linux VM w/ C++ and Fortran 2003
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