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* Update shared object file numbers according to changes in v1.8.18 release.lrknox2016-11-011-14/+26
| | | | | Update autotools and libtool versions. Run bin/reconfigure.
* Merge fix for HDFFV-7991 from trunk to 1.18Vailin Choi2016-09-171-1/+0
| | | | | Missed one change that should be in previous commit. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich.
* Merge fix for HDFFV-7991 from trunk to 1.18Vailin Choi2016-09-161-40/+40
| | | | | Modifications made based on comments from pull request review. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich.
* Merge fix for HDFFV-7991 from trunk to 1.18Vailin Choi2016-09-041-3/+317
| | | | | | [svn-r30308] Fix for HDFFV-7991--error when copying dataset with attribute which is a compound datatype consisting of a variable length string. Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich.
* [svn-r30277] Merge revisions 30264, 30268, and 30275 to 1.8 branchNeil Fortner2016-08-111-17/+184
| | | | | | | | | | | | | | 30264: Fixed an issue that could occur when using H5Pset_alignment where a block could be unaligned, causing an assertion failure. 30268: Remove failure causing code in test/mf.c unintentionally added in r30264. 30275: Rework test_mf_bug1 to work with multi and split drivers. Tested: h5committest, jelly, ummon (trunk); h5committest, jelly, ummon (1.8)
* [svn-r30183] remove reference to unspecified VAR.Allen Byrne2016-07-131-18/+12
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* [svn-r30180] reconfigure after fixing errorsAllen Byrne2016-07-122-19/+32
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* [svn-r30171] HDFFV-9939: convert cmake copy commands to reduce issue with ↵Allen Byrne2016-07-126-145/+198
| | | | | | | too long command lines on some platforms. Also, refactor hl/tools/gif3h5 cmake files. JAVA-1920: add plugin test with plugin that depends on hdf5
* [svn-r30152] Merge of checkin #30151 from the trunk which is a fix for the ↵Vailin Choi2016-07-071-3/+3
| | | | | | daily test failures. Tested on osx1010test, moohan, emu, kituo.
* [svn-r30145] Merge of checkin #30143 to the trunk which is a bug fix for ↵Vailin Choi2016-07-041-0/+277
| | | | | | HDFFV-9940. Tested on oxs1010test, moohan, platypus, emu, kite, kituo, mayll, ostrich, quail.
* [svn-r29964] Fix plugin test executable link libraryAllen Byrne2016-05-241-2/+2
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* [svn-r29751] Fixed some comments in test/external.cDana Robinson2016-04-201-8/+5
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 autotools serial + run external test only (no code changes)
* [svn-r29703] Updated test/Makefile.am to clean up file added in HDFFV-8740 fix.Dana Robinson2016-04-152-2/+2
| | | | Tested on: jam
* [svn-r29702] Merged r29182 and 29183 from the trunk.Dana Robinson2016-04-152-90/+707
| | | | | | | | | Fixes HDFFV-8740 (external file storage relative path fix). Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial autotools w/ C++ & Fortran parallel autotools (MPICH 3.1.4) w/ Fortran serial CMake
* [svn-r29701] Switched HDoff_t to off_t in external test (for Windows).Dana Robinson2016-04-141-23/+23
| | | | | Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial autotools w/ C++ & Fortran
* [svn-r29700] Merge of r29030, 29034, and 29035 from trunkDana Robinson2016-04-143-626/+594
| | | | | | | | | Cleanup of test/externals before merging HDFFV-8740 changes. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 serial autotools w/ C++ & Fortran serial CMake parallel autotools w/ Fortran (MPICH 3.1.4)
* [svn-r29606] Fix for shared file pointer HDFFV-9469. This is the same fix ↵Vailin Choi2016-04-011-0/+158
| | | | | | for revise_chunks (#28908). Tested on jam, platypus, emu, kite, moohan, ostrich, osx1010test, quail.
* [svn-r28875] Merge of r28861 from trunk (minor string format change). Fixes ↵Dana Robinson2016-01-131-2/+2
| | | | | | | HDFFV-9640. Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1 parallel only (MPICH 3.1.4)
* [svn-r28125] Add library version changes based on lt_vers.am file.Allen Byrne2015-10-191-7/+3
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* [svn-r28016] Undo r28009 changes.Albert Cheng2015-10-092-12/+11
| | | | Tested: jam.
* [svn-r28009] HDFFV-9536: Changed H5check_version() to use libtool shared ↵Albert Cheng2015-10-082-11/+12
| | | | | | | | | | | | | | | | | | | | | library version numbers instead of the library version numbers. bin/h5vers: Changed to copy the shared lib version from lt_vers.am to H5public.h (Thanks to Larry who made the changes.) src/H5public.h: Changed by bin/h5vers. src/H5.c: Changed H5check_version() to use shared library version for compatibility checking. test/tcheck_version.c: test/testcheck_version.sh.in: Changed to use shared library version numbers instead of the HDF5 library version numbers for testing. Tested: tested in Jam and Kituo.
* [svn-r27770] Bring r27428 from trunkDana Robinson2015-09-141-16/+74
| | | | | | | | | | | | Reverts the following changes: 27737, 27742, 27743 These involve double conversions that cause problems with the IBM XL compiler. Tested on: h5committest ostrich w/ XL C compiler
* [svn-r27749] Add test propsAllen Byrne2015-09-101-5/+9
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* [svn-r27743] Merge of r26625 from the trunkDana Robinson2015-09-101-24/+0
| | | | | | | Remove the LLONG_TO_LDOUBLE_CORRECT macro/define, it's working around bugs in very old SGI/FreeBSD/Windows compilers. Tested on: jam (minor change that has baked in the trunk for months)
* [svn-r27742] Merge of r26623 from the trunkDana Robinson2015-09-101-32/+0
| | | | | | | Remove the LDOUBLE_TO_LLONG_ACCURATE macro/define, it's working around bugs in older SGI, HP/UX, MacOSX and Windows .NET 2003 compilers. Tested on: jam (minor change that has baked in the trunk for months)
* [svn-r27741] Merge of r26606 from the trunkDana Robinson2015-09-101-4/+0
| | | | | | | Remove HW_FP_TO_LLONG_NOT_WORKS macro/define, it was only addressing Windows .NET 2003 compiler issues. Fixes HDFFV-9189. Tested on: jam (minor change that has baked in the trunk for months)
* [svn-r27736] Merge of r26605 from trunkDana Robinson2015-09-101-53/+0
| | | | | | | Remove CONVERT_DENORMAL_FLOAT, since this was only set in obsolete configure files. Tested on: jam (has baked in the trunk for over 6 months)
* [svn-r27733] Merge of r26602 from trunkDana Robinson2015-09-101-43/+0
| | | | | | | | Remove the H5_SW_ULONG_TO_FP_BOTTOM_BIT_WORKS and H5_FP_TO_ULLONG_BOTTOM_BIT_WORKS macros/defines, as they are no longer used by supported platforms. Tested on: jam (has baked in the trunk for over 6 months)
* [svn-r27730] Merge r26618 from trunkDana Robinson2015-09-091-18/+0
| | | | | | | Remove the FP_TO_INTEGER_OVERFLOW_WORKS macro/define, which is for working around bugs in the Cray X1 compiler and is no longer supported. Tested on: h5committest
* [svn-r27714] Merge from 1.8 branch.Allen Byrne2015-09-091-37/+37
| | | | Add mod file changes from trunk
* [svn-r27700] Port r27605 from trunk to 1.8 branch.Neil Fortner2015-09-081-0/+43
| | | | | | | | | | Tested: jam, koala, ostrich (h5committest) Log from r27605: Fix potential memory error when using a dataspace that was created with H5Screate and had its extent set by H5Sextent_copy. Tested: jam, ostrich (h5committest)
* [svn-r27689] Merge of r27459 and r27460 from trunkDana Robinson2015-09-072-38/+38
| | | | | | | | | | | | | | | Minor warning cleanup (27459) Renamed a few "h5tri_t extended" variables to "h5tri_t was_extended". Apparently, "extended" is a typedef name someplace in the headers used on Solaris, which causes potentially confusing warnings to be emitted. (27460) Minor code cleanup in test/trefer.c - Fixed an out-of-range char assignment. - Added a couple of malloc() casts. Tested on: h5committest
* [svn-r27685] Merge of r27572 from trunkDana Robinson2015-09-0616-251/+14
| | | | | | | | | | Remove all VMS-specific code from the library. The exception is the VMS floating-point tests since those are special as VMS floats are odd. Those files will be considered separately. Fixes HDFFV-9495 Tested on: h5committest
* [svn-r27643] Merge of r27581, 27587, and 27601 from trunkDana Robinson2015-09-013-15/+39
| | | | | | | | | | | | Added a new public API call: H5is_library_threadsafe This API call can determine, at runtime, if the library was built with thread-safety enabled. Also fixes a minor bug in the FUNC_ENTER macros. Tested on: h5committest jam w/ threadsafe
* [svn-r27603] HDFFV-9497: Add back ALLOW_UNSUPPORTED OPTION.Allen Byrne2015-08-281-4/+36
| | | | | Added new option SKIP_HDF5_FORTRAN_SHARED. Adjust H5_HAVE_THREADSAFE only on SHARED libs.
* [svn-r27532] Merge of CMake dual-binary changes from CMake branch to 1.8Allen Byrne2015-08-192-58/+563
| | | | Tested: local linux (CMake branch has been tested on Windows)
* [svn-r27503] Port r27415 from trunk to 1.8 branch.Neil Fortner2015-08-122-0/+402
| | | | | | | | | | | | | Tested: jam, koala, ostrich (h5committest) Log from r27415: Fix potential error with H5I_clear_type which could occur when a callback closed a different ID in the same type. Added a new skiplist routine, H5SL_try_free_safe, which iterates over items, freeing some of them, and which intercepts and defers attempts to remove from the list outside of the main iteration. Changed H5I_clear_type to use this function. Tested: jam, koala, ostrich (h5committest); ummon
* [svn-r27458] Merge of r27407 from trunk. (code cleanup for Solaris debugging)Dana Robinson2015-08-031-1/+1
| | | | | | | | | | | | | | | Updated the H5_ATTR_* macros. - Updated the preprocessor logic that defines the H5_ATTR_* macros. The Solaris Studio compiler understands __attribute__ but not the specific attributes that we use. The H5_ATTR_* macros are now defined as blank with that compiler which significantly cleans up the warnings, making debugging easier. - Replaced a few lingering __attribute__ macros with H5_ATTR_* markup. Tested on: h5committest Solaris w/ Solaris Studio (emu)
* [svn-r27190] merge 27185 from trunk:Mohamad Chaarawi2015-06-111-77/+81
| | | | | | - fix more instances where both mpi is_initialized and is_finalized need to be checked before making any MPI calls. tested with h5committest.
* [svn-r27173] Allen Byrne2015-06-092-22/+29
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* [svn-r27165] Merge 27133 & 27158 from trunk:Mohamad Chaarawi2015-06-0828-139/+139
| | | | | | | | | - Add a new attribute function characterstic for format: * H5_ATTR_FORMAT(X,Y,Z) __attribute__((format(X, Y, Z))) - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED. - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN tested with h5committest.
* [svn-r27098] Merge of r27097 from trunkDana Robinson2015-05-181-2/+2
| | | | | | | | | Fixed a typo in test/th5o.c that caused the wrong property list ID to be checked. Fixes HDFFV-730 Tested on: h5committest
* [svn-r26994] Merge of r26986 from trunk.Dana Robinson2015-05-021-4/+0
| | | | | | | | | | | | Removes H5F_ACC_DEBUG and H5FD_DEBUG functionality. The H5F_ACC_DEBUG symbol remains but has been defined to zero. Fixes: HDFFV-1074 Tested on: h5committest 32-bit Linux w/ C++ and Fortran and multi VFD
* [svn-r26789] brought changes 26767 and 26772 from the trunk into the branch.Scot Breitenfeld2015-04-131-2/+57
| | | | Tested: h5committest
* [svn-r26744] Updated the README.txt file to reflect VMS removal; deleted VMS ↵Elena Pourmal2015-04-071-18/+150
| | | | installation instructions.
* [svn-r26728] Merge trunk reviwions 26669 and 26670.Larry Knox2015-04-041-1/+0
| | | | | | Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure. Tested h5committest
* [svn-r26717] Merge revisions 26387, 26649, 26650, 26678, and 26691 from ↵Mohamad Chaarawi2015-04-031-4/+3
| | | | trunk to squish warnings.
* [svn-r26709] Port r26690 from trunk to 1.8 branch.Neil Fortner2015-04-021-0/+28
| | | | | | | | | | | | | Tested: jam, koala, ostrich (h5committest) Log from r26690: Fix error in H5Sextent_copy When the selection is set to all, H5Sextent_copy did not update the number of elements in the selection in the destination space. Fixed H5Sextent_copy to do this. Added tests for this functionality. Tested: jam, koala, ostrich (h5committest)
* [svn-r26708] Port r26301 from trunk to 1.8 branch.Neil Fortner2015-04-021-0/+92
| | | | | | | | | | | | Tested: jam, koala, ostrich (h5committest) Log from r26633: Description: Bring Neil's fix for error in H5S_extent_copy() back to the trunk. Tested on: Mac OSX/64 10.10.2 (amazon) w/serial (h5committest forthcoming)
* [svn-r26703] Merge of r26392 from trunk.Dana Robinson2015-04-012-0/+80
| | | | | | | | | | | Adds new memory allocation functions that use the library's memory allocator. Intended for use with third-party filter code. Tested on: h5committest, Solaris (emu), OS X (quail) Note: emu fails with the existing Inf/inf case problem in h5dump but no other tests fail.
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