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* [svn-r12842] Description:Quincey Koziol2006-11-022-18/+18
| | | | | | | | | | | | | | | | Refactor generic property list initialization code to put property list specific routines in property list modules, instead of scattered to the four winds. Also, introduce property list class initialization objects, to make adding new property list classes in the library easier. Fix daily test failure by using H5Pget_elink_prefix() API routine instead of looking at the "raw" generic property list information. Tested on: Mac OS X/32 10.4.8 (amazon) FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/C++ & FORTRAN Linux/64 2.4 (mir) w/build-all & 1.6 compat
* [svn-r12835] Description:Quincey Koziol2006-10-313-70/+70
| | | | | | | | | Change H5Lget_linkinfo() to H5Lget_info() to better align with coming API changes. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12834] Description:Quincey Koziol2006-10-311-2/+11
| | | | | | | | Uncomment out tests that were accidentally left out. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12833] Description:Quincey Koziol2006-10-3115-223/+213
| | | | | | | | Clean up more warnings... Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12831] Changed the API for "unpacking" an external link value to take ↵James Laird2006-10-301-4/+13
| | | | | | | | | | the size of the linkval buffer, per Elena and Frank's suggestions while revising the documentation. Added error checking using this size, as well as a couple of tests. Tested on juniper, kagiso, and sol.
* [svn-r12830] Description:Quincey Koziol2006-10-301-5/+378
| | | | | | | | | Finish internal work necessary to track creation order in v2 B-tree when group is in "dense" storage form. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12829] Description:Quincey Koziol2006-10-307-372/+372
| | | | | | | | Clean up more compiler warnings, esp. on Linux/64 platform. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12828] Description:Quincey Koziol2006-10-306-120/+128
| | | | | | | | Clean up compiler warnings... Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12827] Description:Quincey Koziol2006-10-301-4/+9
| | | | | | | | Correct typo that was causing tests to fail. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12825] Description:Quincey Koziol2006-10-301-7/+393
| | | | | | | | Rudimentary support for creating creation order index (but not inserting links in it yet). Testedon: Mac OS X/32 10.4.8 (amazon)
* [svn-r12823] Description:Quincey Koziol2006-10-291-44/+424
| | | | | | | | | | | | | Add support for compress heap blocks in "managed" heaps. Also, fix bug when the first direct block moves between having a parent and not having one (and vice versa), which occurs when the heap moves between having a direct root block and having an indirect root block. Tested on: FreeBSD 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/C++ & FORTRAN Linux/64 2.4 (mir) w/build-all & 1.6 compat
* [svn-r12822] H5Pset_alignment seems working. Added it in test/vfd.c and ↵Raymond Lu2006-10-282-3/+122
| | | | | | made the test more complete by writing two data sets. One is aligned, and the other isn't.
* [svn-r12821] Description:Quincey Koziol2006-10-281-68/+69
| | | | | | | | | Clean up compiler warnings, esp. on 64-bit Linux boxes. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/C++ & FORTRAN Linux/64 2.4 (mir) w/build-all & 1.6 compat
* [svn-r12820] Added fragmental copy buffer to H5FD_direct_write. This buffer ↵Raymond Lu2006-10-272-5/+5
| | | | | | | size is set through H5Pset_fapl_direct. It's been added to H5FD_direct_read in the previous checkin. Still, a test is needed at later checkin.
* [svn-r12806] Description:Quincey Koziol2006-10-241-62/+62
| | | | | | | | | | Reduce memory usage for common cases of I/O pipeline filter memory usage. Also, clean up some more code... Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12804] Missing an argument(fapl) for a routine that tests the ↵MuQun Yang2006-10-231-1/+1
| | | | | | existence of szip encoder. Windows picked this up. Tested with VS 6.0 with szip enabled.
* [svn-r12803] Description:Quincey Koziol2006-10-238-155/+195
| | | | | | | | | | | | | | Finish new version of the I/O pipeline message, which is much smaller than the previous version. This version is used with the "use the latest version of the format" flag. Closed several memory leaks/overruns (found with valgrind). Also, lots of compiler & formatting cleanups. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12801] Description:Quincey Koziol2006-10-231-5/+5
| | | | | | | | | | | | Fix several errors in the "latest version" of the object header format changes and enable the new version when requested now. Clean up several confusing or duplicated sections of code. Tested on: Linux/32 2.4 (heping) Linux/64 2.4 (mir) FreeBSD/32 4.11 (sleipnir)
* [svn-r12776] The internal change is to make the 3 parameters of ↵Raymond Lu2006-10-181-1/+13
| | | | | | | | H5Pset_fapl_direct be a structure and passed through driver info functions in H5FD_direct_open, H5FD_direct_read, and H5FD_direct_write. The external change is to add a new API function H5Pget_fapl_direct to query 3 control values, the memory boundary, file system block size, and the maximal buffer size for copying data.
* [svn-r12774] Modified flush code in the metadata cache to allow it toJohn Mainzer2006-10-183-54/+6501
| | | | | | | | | | | | | | | | | handle flush callbacks which can dirty other entries, and resize and/or rename the target entry. This feature is needed by the fractal heap code. Also added associated test code. H5Commit tested. Test failed on heping, but the error appears to be a syntax error in an un-related file. Tests on copper & sol passed, along with tests on phoenix.
* [svn-r12768] Description:Quincey Koziol2006-10-161-10/+10
| | | | | | | | | | Add 'initval' parameter to "lookup3" checksum routine (and implicitly to the metadata checksum routine), to allow chaining several checksums together easily (which isn't used by these modules, but will be used in my next checkin) Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12767] Description:Quincey Koziol2006-10-161-3/+3
| | | | | | | | Code cleanup to improve formatting & reduce compiler warnings. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12766] Made two changes to Direct I/O VFD: first added 3 parameters to ↵Raymond Lu2006-10-162-4/+6
| | | | | | | | H5Pset_fapl_direct to control memory boundary, file block size, and maximal copy buffer size; second in H5FD_direct_write and H5FD_direct_read, the library checks whether data buffer is aligned. If it is, then write and read the data directly instead of making a copy buffer.
* [svn-r12759] Description:Quincey Koziol2006-10-133-4/+4
| | | | | | | Fix errors with check-vfd and recent modifications to tests. Tested on: Linux/64 2.4 (mir) w/check-vfd
* [svn-r12751] Purpose:Albert Cheng2006-10-128-70/+72
| | | | | | | | | | | | | | | | Bug fix (related to 544) Description: h5_get_file_size() was coded to return 0 if failed but file size can be 0. Changed the failure return value to -1 which is allowed by the returned type of off_t which is a signed type. Also changed the checking code of the stat call to just == 0 since that is how it is defined. Test: Could test it in heping only. Both Sol and Copper failed to compiled due to error in the Direct IO VFD code.
* [svn-r12748] _exit() function for Windows DLL cannot immediately terminate ↵MuQun Yang2006-10-111-4/+17
| | | | | | | | | the calling process. So new flush2 tests generates false failures for DLL version on windows. Two cases of flush2 tests were skipped temporarily on windows. The inserted windows macros should be removed when a better solution is found. Tested on vs6.0 and vs 7.1 and Linux.
* [svn-r12741] Added support for direct I/O to check-vfd. The direct VFD is ↵James Laird2006-10-102-4/+9
| | | | | | | | | | only tested if it is enabled. Added Direct VFD status to the configure summary. Removed a line left over from pablo support. Oops!
* [svn-r12740] Description:Quincey Koziol2006-10-104-98/+166
| | | | | | | | | | | Update datasets and the layout, attributes and fill-value object header messages to use the latest version of the file format flag. Tested on: FreeBSD 4.11 (sleipnir) Linux/64 2.4 (mir) Linux/32 2.4 (heping)
* [svn-r12739] Added Direct I/O driver to VFD. It's only supported by SGI ↵Raymond Lu2006-10-103-0/+90
| | | | | | | | | | Altix (cobalt). There's a configure option --enable-direct-vfd/--disable-direct-vfd to enable/disable Direct I/O support. The default is enabled. There's a small test in test/vfd.c. Another way to test it is to set environment variable HDF5_DRIVER to "direct" and run "make check" in the test/ directory. There'll be some further improvement in the following checkin including allowing user to provide memory boundary value, file block size, and copying buffer size.
* [svn-r12736] Description:Quincey Koziol2006-10-0911-71/+88
| | | | | | | | | | | | | | | | | | | Add "use the latest format" support for dataspace object header encode/ decode routines and clean up format a bit for the latest format (new to 1.8.x releases) Remove storing 'perm' parameter for array datatypes in memory and the file, and add test to make certain that if any user applications are attempting to store them, we get some reports back. (Should be unlikely, since the RefMan says that the parameter is not implemented and is unsupported). Carry those changes into the tests, etc. Clean up a bunch more compiler warnings. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/FORTRAN & C++ Linux/64 2.4 (mir) w/enable-1.6-compat
* [svn-r12729] Skipped reserved test. Hopefully the test will be updated someday.James Laird2006-10-061-0/+7
| | | | Tested on heping.
* [svn-r12719] Configured external links to (by default) use the FAPL of the ↵James Laird2006-10-041-1/+1
| | | | | | | | | | parent file, rather than H5P_DEFAULT. This lets them be used with stdio and directio drivers. Tested on mir and juniper (check-vfd takes a long time!).
* [svn-r12718] Purpose: New FeatureLeon Arber2006-10-042-15/+130
| | | | | | Description: Add a new part to the flush test that checks to see what happens in case a file is flushed, and then a new dataset is created and the program exits without flushing this subsequent dataset. The test verifies that, at the very least, the data written out before the H5Fflush call is correct.
* [svn-r12715] Incorporated a user-submitted patch to better detect the 'tr' ↵James Laird2006-10-031-0/+1
| | | | | | | | | | | | utility and quote its arguments. Also checks for the 'socket' library on Solaris. If this patch passes the Daily Tests and makes the user happy, I'll port it back to the 1.6 branch. Tested on mir and sol.
* [svn-r12712] Description:Quincey Koziol2006-10-031-24/+82
| | | | | | | | | | Finish 'use the latest version of the format' changes to the datatype object header message. Compound and enumerated types will now be encoded more efficiently by packing the field names & member offsets better. Tested on: Linux 2.6/32 (chicago) Linux 2.6/64 (chicago2)
* [svn-r12711] Description:Quincey Koziol2006-10-031-1/+7
| | | | | | | Define 'TRUE' macro and remove dependency on h5test header/library. Tested on: Linux/64 2.6 (chicago2) w/--enable-build-all
* [svn-r12710] Added an include for "h5test.h" to test/gen_new_group.c to fix ↵James Laird2006-10-031-0/+1
| | | | | | | | | a compilation error. Since this is a "gen" program that generates a test file, it isn't always built. Use ./configure --enable-build-all to test it.
* [svn-r12709] Description:Quincey Koziol2006-10-031-2/+2
| | | | | | | Don't use 'TEST_ERROR' macro in file generation... Tested on: None, just eyeballed - very minor...
* [svn-r12708] Description:Quincey Koziol2006-10-031-3/+136
| | | | | | | | | | | | | | | | | | | Add the "use the latest version of the format" support to datatype messages. And a regression test to check that it's working. Also, found that we have been over-allocating space for compound datatype messages (when they have array datatypes or can use the latest version of the format) and trimmed the size back. Clean up datatype & dataspace encode/decode routines by having them allocate & release "fake" file structures, which gets them out of needing to "know" about the internals of file structures. Other minor whitespace/formatting cleanups, etc. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12707] Description:Quincey Koziol2006-10-021-4/+4
| | | | | | | | | Further minor modifications to the file format for tracking links in groups. This is tentatively the "final" file format for groups. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12706] Description:Quincey Koziol2006-10-021-23/+23
| | | | | | | | | Clean up some of the warnings on 64-bit Linux... Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2) Too minor to require h5committest
* [svn-r12705] Description:Quincey Koziol2006-10-021-9/+13
| | | | | | | | | | | | Fix file handle destroy routine to not attempt to flush out partially initialized file handles (when opening a file fails). Tested on: (until they finished testing, this time... :-) FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/64 2.4 (mir) w/1.6 compat Linux/32 2.4 (heping) w/FORTRAN & C++ Mac OSX/32 10.4.8 (amazon)
* [svn-r12702] Description:Quincey Koziol2006-10-021-2/+38
| | | | | | | | | | | | | | | | | Add test to fractal heaps to exercise issues with opening the same heap through two different file handles. Fix issues with file handle contexts in metadata cache callbacks for heap components. Fix bug in file close handling where cached information was being invalidated even when another file handle was open to the file. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/64 2.4 (mir) w/1.6 compat Linux/32 2.4 (heping) w/FORTRAN & C++ Mac OSX/32 10.4.8 (amazon)
* [svn-r12700] Alert:Quincey Koziol2006-10-0220-3263/+3513
| | | | | | | | | | | | | | | | | | | | | | | | | | | | File format is not stable, don't keep files produced! Description: First stage of checkins modifying the format of groups to support creation order. Implement "dense" storage for links in groups. Try to clarify some of the symbols for the H5L API. Add the H5Pset_latest_format() flag for FAPLs, to choose to use the newest file format options (including "dense" link storage in groups) Add the H5Pset_track_creation_order() flag for GCPLs, to enable creation order tracking in groups (although no index on creation order yet). Remove --enable-group-revision configure flag, as file format issues are now handled in a backwardly/forwardly compatible way. Clean up lots of compiler warnings and other minor formatting issues. Tested on: FreeBSD/32 4.11 (sleipnir) w/threadsafe Linux/32 2.4 (heping) w/FORTRAN & C++ Linux/64 2.4 (mir) w/enable-v1.6 compa Mac OSX/32 10.4.8 (amazon) AIX 5.3 (copper) w/parallel & FORTRAN
* [svn-r12696] Purpose: Add FeatureLeon Arber2006-09-292-82/+174
| | | | | | | | Description: Add a second test case to the serial flush tests. This tests the case when the file is not flushed out to disk and verifies that it fails as expected. Platforms: Linux (heping)
* [svn-r12682] Description:Quincey Koziol2006-09-261-1/+1
| | | | | | | Make Windows64 compiler happy by initializing variable... :-) Tested on: None - just eyeballed (very minor)
* [svn-r12680] Description:Quincey Koziol2006-09-252-1145/+1568
| | | | | | | | | Review, revise & checkin in Peter's latest round of object copy changes, which add basic support for datasets & attributes with reference datatypes. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r12668] Description:Quincey Koziol2006-09-151-3/+3
| | | | | | | Re-run 'bin/reconfigure' script after recent checkins Tested on: none - shouldn't have any affect on compilation
* [svn-r12666] Description:Quincey Koziol2006-09-141-1/+1
| | | | | | | Initialize local variable that is causing compiler problems on Windows/64 Tested on: None - too trivial
* [svn-r12661] Description:Quincey Koziol2006-09-121-0/+30
| | | | | | | | | | | Add 'loookup3' checksum routine and switch to using it for metadata checksums - it's just as "strong" as the CRC32 and about 40% faster in general (with some compiler optimizations, it's nearly as fast as the fletcher-32 algorithm). Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
generated by cgit v0.12 at 2024-11-02 19:44:52 (GMT)