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* [svn-r14154] Description:Quincey Koziol2007-09-251-3/+3
| | | | | | | | | | | | | | | | | | | | Finish deprecating last H5G symbol (H5G_obj_t) - yay! Lots of misc. library fixes to remove confusion between links and objects. The tools could still use another pass, to remove h5trav_type_t type and make the correct distinction between links & objects. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
* [svn-r14153] Description:Quincey Koziol2007-09-251-0/+258
| | | | | | | | | | | | | Add regression test for H5Rget_obj_type1() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 2.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14150] Pedro Vicente Nunes2007-09-181-1/+1
| | | | | | bug fix: a CHECK macro had a wrong function name (H5Pget_link_creation_order) in the description tested: linux
* [svn-r14148] Description:Quincey Koziol2007-09-143-221/+246
| | | | | | | | | | | | | | | | Add H5Rget_obj_type() to the API versioning and switch internal routines to use H5Rget_obj_type2() Misc. other code cleanups, etc. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14146] Description:Quincey Koziol2007-09-134-125/+107
| | | | | | | | | | | | | | Move H5Gget_objtype_by_idx() to deprecated symbols section, replacing with H5Oget_info_by_idx() Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14145] Description:Quincey Koziol2007-09-134-65/+68
| | | | | | | | | | | | | | Move H5Gget_objname_by_idx() to deprecated symbols section. Replace internal usage with H5Lget_name_by_idx(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14144] Description:Quincey Koziol2007-09-1316-623/+539
| | | | | | | | | | | | | | | | Move H5Gget_objinfo() to deprecated symbols section and retarget internal usage to H5Lget_info()/H5Oget_info(). Misc. other code cleanups... Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 2.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14136] Description:Quincey Koziol2007-09-066-51/+56
| | | | | | | | | | | | | | Move H5Gget_num_objs() and several minor macros, etc. to deprecated symbols section, replacing it with H5Gget_info(). Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14134] Description:Quincey Koziol2007-08-311-4/+4
| | | | | | | Cast usage of hsize_t variable as array index into size_t. Tested on: Linux/32 2.6 (kagiso) w/PGU compilers
* [svn-r14131] Description:Quincey Koziol2007-08-307-68/+94
| | | | | | | | | | | | | | Move H5Giterate() and H5G_iterate_t to deprecated symbols section, replacing them with H5Literate and H5L_iterate_t respectively. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) AIX/32 5.3 (copper) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14129] Description:Quincey Koziol2007-08-305-30/+36
| | | | | | | | | | | | | | | | Add H5O{set|get}_comment routines, which were overlooked before. Move H5G{set|get}_comment routines to deprecated code section, replacing internal calls with H5O{set|get}_comment. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) AIX/32 5.3 (copper) Mac OS X/32 10.4.10 (amazon)
* [svn-r14127] Description:Quincey Koziol2007-08-292-49/+50
| | | | | | | | | | | | | Move H5Gget_linkval to deprecated symbol section and replace with H5Lget_val for internal calls. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14126] Description:Quincey Koziol2007-08-2911-760/+782
| | | | | | | | | | | | | Move H5Gunlink to deprecated symbol section, replacing internal calls with H5Ldelete. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14123] Description:Quincey Koziol2007-08-283-16/+16
| | | | | | | | | | | | | Move H5Gmove2() to deprecated code section, replacing it with H5Lmove() in the source code. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14122] Description:Quincey Koziol2007-08-285-173/+178
| | | | | | | | | | | | | Move H5Gmove() to deprecated code section, replacing with H5Lmove() in source files. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14121] Description:Quincey Koziol2007-08-281-4/+4
| | | | | | | Correct a couple of swapped parameters for creating soft links. Tested on: FreeBSD/64 6.2 (liberty)
* [svn-r14120] Description:Quincey Koziol2007-08-287-185/+183
| | | | | | | | | | | | Move H5Glink2 to deprecated routines section. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14118] Description:Quincey Koziol2007-08-281-2/+2
| | | | | | | | | Fix inverted link parameters in setup() routine. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Solaris/32 5.10 (linew)
* [svn-r14117] Description:Quincey Koziol2007-08-287-275/+278
| | | | | | | | | | Move H5Glink() into "deprecated routines" section, replacing internal usage with H5Lcreate_hard/H5Lcreate_soft. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Solaris/32 5.10 (linew)
* [svn-r14115] Description:Quincey Koziol2007-08-2818-1455/+1412
| | | | | | | | | | | | | | | | | Remove all plain calls to H5Gopen() from source, replacing them with either H5Gopen2(). Add test for H5Gopen1(). Reformatted several pieces of code, to clean them up. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew) Mac OS X/32 10.4.10 (amazon)
* [svn-r14112] Description:Quincey Koziol2007-08-241-11/+18
| | | | | | | Avoid file size queries/comparisons when using core VFD. Tested on: FreeBSD/32 6.2 (duty) w/core VFD
* [svn-r14104] Description:Quincey Koziol2007-08-2328-852/+892
| | | | | | | | | | | | | Pursue calls to H5Gcreate() relentlessly and ruthlessly exterminate them, leaving only a few tame specimens in text files and comments. ;-) Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r14101] Description:Quincey Koziol2007-08-231-2/+2
| | | | | | | | | Change definition of H5E_walk1_t compatibility type to match the H5E_walk_t type in the 1.6.x library. Tested on: Mac OS X/32 10.4.10 (amazon) Too minor to require commit test
* [svn-r14097] Description:Quincey Koziol2007-08-217-49/+82
| | | | | | | | | | | | | First real use of API versioning code, H5E routines switched to use new API versioning scheme. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Linux/64 2.6 (smirom) Solaris/32 5.10 (linew)
* [svn-r14085] Description:Quincey Koziol2007-08-141-11/+4
| | | | | | | | | Refactor H5HF_size() size statistics code for fractal heap to conform to how the rest of the fractal heap routines work. Tested on: FreeBSD/32 6.2 (duty) Mac OS X/32 10.4.10 (amazon)
* [svn-r14083] Description:Quincey Koziol2007-08-141-0/+141
| | | | | | | | | | Correct problem with fractal heap's free space size usage gathering routine, which was "poisoning the cache" by loading an incorrectly initialized piece of metadata from the file. Tested on: FreeBSD/32 6.2 (duty) Mac OS X/32 6.2 (amazon)
* [svn-r14082] Description:Quincey Koziol2007-08-141-2/+149
| | | | | | | | | Fix bug with moving object header messages forward into null messages of exactly the same size and located in an object header chunk with a gap. (Exposed by netCDF-4 test) Tested on: FreeBSD/32 6.2 (duty)
* [svn-r14064] Implemented function allowing the user to cork the metadata cache.John Mainzer2007-08-102-25/+1586
| | | | Also implemented associated test code.
* [svn-r14020] Description:Quincey Koziol2007-07-261-0/+83
| | | | | | | | | | | Correct error in size of v2 B-tree metadata prefix, which could cause too many entries to get inserted into a node, eventually causing either a file corruption bug (if debugging asserts were off) or a core dump on the assertion which checked this. Tested on: Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r14008] Description:Quincey Koziol2007-07-241-3/+3
| | | | | | | | | | | Minor comment & testing cleanups Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Mac OS X/32 10.4.10 (amazon) Solaris/32 2.10 (linew)
* [svn-r14004] Description:Quincey Koziol2007-07-241-19/+23
| | | | | | | | | | | | Fix problem with datatype messages where the version of the format for a datatype message could depend on the "use the latest format" flag from the file after it was initially created. Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Mac OS X/32 10.4.10 (amazon)
* [svn-r14003] Description:Quincey Koziol2007-07-241-0/+8
| | | | | | | | | | Code cleanup & whitespace fixups Tested on: FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty) Linux/32 2.6 (kagiso) Mac OS X/32 10.4.10 (amazon)
* [svn-r13997] Moved H5D_istore_lock and H5D_istore_unlock from ↵Raymond Lu2007-07-211-0/+3
| | | | | | | | | H5D_istore_writevv and H5D_istore_readvv to H5D_chunk_write and H5D_chunk_read to avoid frequent lock and unlock and to improve some performance. Tested with h5committest on THG machines.
* [svn-r13996] Description:Quincey Koziol2007-07-211-0/+1
| | | | | | | Add missing "PASSED" message for successful test. Tested on: FreeBSD/32 6.2 (duty)
* [svn-r13995] Description:Quincey Koziol2007-07-211-3/+3
| | | | | | | | Reduce the dataset dimensions for the "check extend" test, so it doesn't take so long... Tested on: FreeBSD/32 6.2 (duty) w/check-vfd
* [svn-r13994] Description:Quincey Koziol2007-07-211-1/+1
| | | | | | | Add a bit more information to the log VFD settings. Tested on: FreeBSD/32 6.2 (duty) w/check-vfd
* [svn-r13990] Description:Quincey Koziol2007-07-201-1/+1
| | | | | | | | | | Allow a ".h5" suffix to be added to core files also, which prevents overwriting the test binary (and confusing the tests on copper, etc.) Tested on: AIX 5.3 (copper) w/check-vfd FreeBSD/32 6.2 (duty) FreeBSD/64 6.2 (liberty)
* [svn-r13988] Description:Quincey Koziol2007-07-181-0/+109
| | | | | | | | | Fix bug where the version of an attribute would change after it was created, causing the amount of space used to encode it to change. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty)
* [svn-r13987] Description:Quincey Koziol2007-07-171-2/+2
| | | | | | | | Fix ohdr test for changes to internal 5O_get_info() routine. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty)
* [svn-r13972] Description:Quincey Koziol2007-07-131-0/+1
| | | | | | | | | Add --with-default-api-version configure flag. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) Linux/32 2.6 (kagiso)
* [svn-r13971] Description:Quincey Koziol2007-07-121-0/+1
| | | | | | | | | | | | | | Add --enable-deprecated-symbols configure option, to allow users to remove deprecated public API symbols at configure time. Add bin/make_vers script to bin/reconfigure actions. Run bin/reconfigure to regenerate autotool components. Tested on: Mac OS X/32 10.4.10 (amazon) FreeBSD/32 6.2 (duty) Linux/32 2.6 (kagiso)
* [svn-r13945] Description:Quincey Koziol2007-07-051-3/+30
| | | | | | | | | | | | | | Modify semantics for constant messages slightly, to allow them to be deleted, but not modified. This works around the issue where "old" style groups are being created with the symbol table message marked constant in the 1.6 (and prior) branch, but the 1.8 branch needs to remove the symbol table message when the group has been changed to the "new" style (upon insertion of a link that the "old" style can't handle). Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13944] Description:Quincey Koziol2007-07-051-14/+413
| | | | | | | | | Fix problem with VL-datatype fill values when shrinking dataset's dimensions Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13941] Added feature to test the latest format by adding "latest" as theAlbert Cheng2007-07-051-0/+3
| | | | | | | HDF5_DRIVER value to activate the use of latest_format for file access property list. Platform tested: h5committested.
* [svn-r13938] Description:Quincey Koziol2007-07-031-48/+108
| | | | | | | | | "Genericize" the datatypes for fill value testing when extending a dataset. Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13937] Description:Quincey Koziol2007-07-031-38/+58
| | | | | | | | | A few more cleanups for testing [atomic] fill values and extending datasets Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13936] Description:Quincey Koziol2007-07-031-132/+192
| | | | | | | | | | Extract main test for extending a dataset into separate routine, to facilitate testing different parameters. Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)
* [svn-r13928] Purpose: 1) Moving H5_CXX_HAVE_OFFSETOF macro to ↵Mike McGreevy2007-06-291-3/+2
| | | | | | | | | | src/H5pubconf.h file. 2) Removing configuration of c++/src/H5cxx_pubconf.h file. Reasoning: the additional pubconf file caused compilation complications, this is cleaner. Tested: kagiso, smirom
* [svn-r13925] Purpose: intermediate checkin for offsetof fix for PGI compiler.Mike McGreevy2007-06-281-2/+3
| | | | | | | | | | Description: added new configuration to generate a pubconf file in the c++/src directory, H5cxx_pubconf.h. When C++ compiler recognizes 'offsetof', the macro H5_CXX_HAVE_OFFSETOF is defined in the new pubconf file. tested: kagiso, smirom
* [svn-r13920] Description:Quincey Koziol2007-06-261-8/+8
| | | | | | | | | Uncomment some additional tests, which are [now?] working. Tested on: Mac OS X/32 10.4.10 (amazon) Linux/32 2.6 (chicago) Linux/64 2.6 (chicago2)